Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre04g1447 | ATGATTGTCTTCAAATTGTTTTCAACACGCGACCCCACCAATCGCGTGAGACTGGTTCCCGTCTTTGAACTCCGGCGCCAGAGCGTCCACGGTGCACAAATGAGCTTCTTTGTCTCCTCAGGTTTAATTGTTACTATCTGTAATATGGGAACTCAAGGTCAAACAGGATTAGTAGCACAAAAGAAGATGCAACCTCCTCAACCTGGAAGATTTGAAGATCGTGAAGATCTCATTAAATATGTTCGTGATTTTGGTGCTGATCAAGGATATGTGGTAACAATTAAGAAGTCTAGGAAAGATAGAAGGGTCATCCTTGGTTGTGATAGAGGAGGCGTGTACCGTAACAGGCGTAAGATTGATGAGAGTCCACGCAAAAGGAAAGCTAGCTCGCGCCTGATAAATTGCCCGTTTGAAGCAATTGGCAAGAAGGAAGATGATGCCTGGATGCTTACCATTAAAAATGGGGACCATAACCATGAGCCCTTAAAAGACATGTCAGAGCATCCTTACAGTCGCCGTTTTACTGAGGATGAAGTAAAGCAAATAAAACTGATGACTGAAGCTGGTATAAAACCACGTCAAGTGCTTAAAGCTCTCAAACAACACAATCCAGATCTGCAGTCAACACCAAGGCATTTGTATAACCTCAAAGCCAAAATTCGCCAAGGAAATCTATCAGAAAAAAATTTCAAGTCATGGAGACCTAATATTTCAGTTCCTACAAATAGTAGTCATACTGTCATTGGGGATTCAGTCAAGCAAAATCATCAGCTGAAGGTTCCTAATTTAATTGGAGGGGAATTTTTGGATTCGCACAACTGTCCAGTGGTTGATGTTATTAATCCAGCAACGCAAGAAGTTGTTTCTCATGTCCCTTTAACAACCTACGAAGAGTTTAAGGCTGCAGTTAATGCAGCCAAACAAGCTTTTCCCTCATGGAGAAACACACCGATTTCTACTCGTCAATGTGTTATGTTCAAGTTTCAGGAGCTCATCCTCAGGGACATGGATAAGCTTGTGACGAATATTGTCACAGAACAGGGAAAAACATTAAGGGATGCTCAAGATGATATCATCTGTGGTTTAGAGGTGGTTAAACATGCTTGTGGATTGGCCACTATGCAAATGGGGGAGTTCATCCCTAATGCAACTGATGGAATTGATTCGTACTGCATCCGAGAACCAATAGGTGTGTGTGCTGGGATATGCTCTTTAAACCATCCAGCAACAGTTTCCTTATGGATGTTTCCGATTGCAGTTACTTGTGGCAATACATTTGTTCTTAAGCCATGTGAAACGCACCCGGGGGCTTCAATGTTGCTTGCTGCATTAGCAGTTGAGGCTGGCTTGCCTGATGGTGTTCTAAATATTGTTCATGGAACCCATGATATCATCAACTATATATGTGATGATGAAGACATAAAAGCCATATCTTTTTCCAGTTCAAGTTCAGTTGGAAAGAACATATATGCTAGGGCTGCTACTACAGGAAAGCAAGTTCAGTCCCACTTTGGAGGCAAGAGTCATGCAATTATTATGCCTGATGCTAACATGGAGGCCACTTTAAGTGCTCTGGTTGATGCTGGATTTGGTACTGCTGGACGGACATGTTTGGCTATCGACATCGTTGTCTCCGTTGGGAGTTCAATTCTGTGGGAAGAAAAACTTGTGGAATGTGCCAAAGCACTTAAAGTGAATGTGGGGACAGATCCCAAAGCTGACCTTGGTCCTGTAATTACCAAACAGGTGAAAGATCGCTTTTGTAAATTAGTTCAAAGTGGCATTGAAGATGGTGCCAGACTTTTGCTTGACGGTAGAGATATTGTGGTCCCAGGATATGAAAATGGAAATTTTGTTGGTCCAACCATTTTATCTGATGTAACAACTGACATGGAGTGCTACAAGGAAGAATTTTTTGGACCAGTTCTCCTTTGTATGCAGGCTGACAACCTAGAGGAGGCTATATCCATTGTAAACAGAAACAAGAACCGAAATGGAGCTTCCATATTCACAACTTCTGGCATTTATGCGAGGAAGTTTCAGAGTGACGTGGAAGTGGGAATGGTTGGTACCAATGTTGCTGTTACAGTTCCGTTGCCATCTTCCTTTAATGATAAGGCAGGACTGGAGTTTTACACCCAATTGAAAAGAGTGGCTCAACAGTGGAAGAACTCACCAAGTATTGGAGTCTCAATGGCGCTGCCTTCACCATCTGAGAGACATTTGAGATCCCGTGCTGTACCTTCCATGTTGGTTTCAACATCTGAGAAAGATTCACCTGGGATGCAGCACAAAAGTTTACCCCCATTGCCTTCCACATCTGAGAGGGATTCACCTGGTGTCGCTGTACTGCTGCCGAACTCTCAAATATCTCAGACAGGTTTAACCAATGAAAGAGCCACCTCCTCTCCGCCGACTCCTGATAGGGATTTGCACGGTCAGGGACTTCCCCTGATTTCTACCTTGTCATCAGAGGGGGACGTATCCAACCAAGATTTGTCTCCTGCTATGCTTTCAGCAGGCGACAGAGATTTACCTGGTCAAGCTGTGTCAGTGGCAACATCCCGATCATCTGAGCAACTGTATATACCTCAGAAATCTCATTGGAACGCAACCCTAAGGGCTGATTCAATTCCATCCAGTTCTGAGAGGATCCATGCGCCCTCATCGCACACAAACAACATCAAAGGGCAGGCATCTCGAACAACTCATCCGGCTTTGGTCTTAGCTGCAGAGGGGTTATATGTGCCAACATCTCATGACAGTATTTGTCTCATTAACCATAGAAATGATAGTACGGTTCCATCTCGAAGAATTGACAGCATGTGTCAATCATCAGAACGGGTATACATGCTAGCAACTTCCCATCTGAACGACACTATGAGTCGAACATTGCAGAGAACTGATACCTCCTTGTTTTCTTCTTCAGAGAGGCATTATGTGCCTCCCTCTTCTGATGGAAATGACCATATCAGCTTAGCTTCTCATACCGACGTTGCATTGCAATCAACCTCAGATAGAATGTACTTGTCTAGCTTGTCCGAGAGGAACGATAATATGGCTTCCGCTGCTTCTCAACAAGCCGAATCTTTAACATCCACTTCAGAGAGAATGTATATACCTCCATTAGTTCATAGAAATGCAGGTATGGCACCAAAATCGGAATGGCTATGCATTCCCACACCTGCTGGATCTCAGAGAATGTACCCACAAGGTCCAATAGTTTCAGCAGATGAATTTCAAAGCCAAGGAGCATCATTAACATTGCCTGCATCGCAAAGAATGTAA | 3288 | 43.58 | MIVFKLFSTRDPTNRVRLVPVFELRRQSVHGAQMSFFVSSGLIVTICNMGTQGQTGLVAQKKMQPPQPGRFEDREDLIKYVRDFGADQGYVVTIKKSRKDRRVILGCDRGGVYRNRRKIDESPRKRKASSRLINCPFEAIGKKEDDAWMLTIKNGDHNHEPLKDMSEHPYSRRFTEDEVKQIKLMTEAGIKPRQVLKALKQHNPDLQSTPRHLYNLKAKIRQGNLSEKNFKSWRPNISVPTNSSHTVIGDSVKQNHQLKVPNLIGGEFLDSHNCPVVDVINPATQEVVSHVPLTTYEEFKAAVNAAKQAFPSWRNTPISTRQCVMFKFQELILRDMDKLVTNIVTEQGKTLRDAQDDIICGLEVVKHACGLATMQMGEFIPNATDGIDSYCIREPIGVCAGICSLNHPATVSLWMFPIAVTCGNTFVLKPCETHPGASMLLAALAVEAGLPDGVLNIVHGTHDIINYICDDEDIKAISFSSSSSVGKNIYARAATTGKQVQSHFGGKSHAIIMPDANMEATLSALVDAGFGTAGRTCLAIDIVVSVGSSILWEEKLVECAKALKVNVGTDPKADLGPVITKQVKDRFCKLVQSGIEDGARLLLDGRDIVVPGYENGNFVGPTILSDVTTDMECYKEEFFGPVLLCMQADNLEEAISIVNRNKNRNGASIFTTSGIYARKFQSDVEVGMVGTNVAVTVPLPSSFNDKAGLEFYTQLKRVAQQWKNSPSIGVSMALPSPSERHLRSRAVPSMLVSTSEKDSPGMQHKSLPPLPSTSERDSPGVAVLLPNSQISQTGLTNERATSSPPTPDRDLHGQGLPLISTLSSEGDVSNQDLSPAMLSAGDRDLPGQAVSVATSRSSEQLYIPQKSHWNATLRADSIPSSSERIHAPSSHTNNIKGQASRTTHPALVLAAEGLYVPTSHDSICLINHRNDSTVPSRRIDSMCQSSERVYMLATSHLNDTMSRTLQRTDTSLFSSSERHYVPPSSDGNDHISLASHTDVALQSTSDRMYLSSLSERNDNMASAASQQAESLTSTSERMYIPPLVHRNAGMAPKSEWLCIPTPAGSQRMYPQGPIVSADEFQSQGASLTLPASQRM | 1095 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 33279659 | 33291223 | + | CrPI670011_04g014470.1 | Cre04g1447 | 495751 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre04g1447 | 1095 | MobiDBLite | consensus disorder prediction | 750 | 773 | - | - | |
Cre04g1447 | 1095 | SUPERFAMILY | ALDH-like | 253 | 724 | IPR016161 | GO:0016491(InterPro) | |
Cre04g1447 | 1095 | MobiDBLite | consensus disorder prediction | 784 | 808 | - | - | |
Cre04g1447 | 1095 | NCBIfam | CoA-acylating methylmalonate-semialdehyde dehydrogenase | 262 | 722 | IPR010061 | GO:0004491(InterPro) | |
Cre04g1447 | 1095 | MobiDBLite | consensus disorder prediction | 881 | 900 | - | - | |
Cre04g1447 | 1095 | PANTHER | MALONATE-SEMIALDEHYDE DEHYDROGENASE | 63 | 736 | IPR010061 | GO:0004491(InterPro)|GO:0004491(PANTHER)|GO:0005739(PANTHER)|GO:0006210(PANTHER)|GO:0006574(PANTHER)|GO:0018478(PANTHER) | |
Cre04g1447 | 1095 | FunFam | Methylmalonate-semialdehyde dehydrogenase (Acylating) | 505 | 704 | - | - | |
Cre04g1447 | 1095 | Pfam | Aldehyde dehydrogenase family | 271 | 699 | IPR015590 | GO:0016491(InterPro) | |
Cre04g1447 | 1095 | CDD | ALDH_F6_MMSDH | 260 | 722 | IPR010061 | GO:0004491(InterPro) | |
Cre04g1447 | 1095 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 1 | 279 | 504 | IPR016162 | GO:0016491(InterPro) | |
Cre04g1447 | 1095 | FunFam | Methylmalonate-semialdehyde dehydrogenase [acylating] | 264 | 511 | - | - | |
Cre04g1447 | 1095 | MobiDBLite | consensus disorder prediction | 817 | 836 | - | - | |
Cre04g1447 | 1095 | MobiDBLite | consensus disorder prediction | 750 | 851 | - | - | |
Cre04g1447 | 1095 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 2 | 505 | 699 | IPR016163 | GO:0016620(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre01g0800 | Cre-Chr1:8929210 | Cre04g1447 | Cre-Chr4:33279659 | 3.10E-191 | dispersed | |
Cre04g1447 | Cre-Chr4:33279659 | Cre06g2537 | Cre-Chr6:33005941 | 4.60E-40 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre04g1447 | K00140 | - | csv:101207178 | 1904.03 |