Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre04g1543 ATGACGGGCAGAGGGTCATCGGGAAGGACGCCGACGTGGAAAGAAAGGGAGAACAATAAGAGGAGAGAGAGGCGACGGAGAGCCATTGCTGCTAAGATCTACACTGGTCTCAGAGCTCAGGGGAACTATAAGCTTCCTAAGCACTGTGACAACAACGAGGTCTTAAAGGCACTCTGTAATGAAGCTGGTTGGGTGGTTGAGGAAGATGGCACCACCTATCGCAAGGGATGCAAGCCACCTCCGATTGATATTGGCACTTCTGCAAATATGAGTGCCTGTTCTTCTCTTCAACCAAGCCCACAATCTTCATGCTTCCCCAGTCCTGTACCATCCTACCATGCCAGTCCTTCTTCATCCTCTTTTCCAAGCCCAACTCGATTCGACGGGAATCCATCTTCTTATCTTCTGCCATTCCTTCAAAATATATCCTCTATTCCTGCTAATCTCCCTCCTCTCAGAATATCGAACAGTGCACCTGTCACACCACCTCTTTCTTCCCCGACGTCAAGGGGTTCGAAGCGAAAGCCCGACTGGGAATCCATTCCAAATAGCTATGTAACCTCTTTCCGCCATCCCCTCTTTGCTGTCTCTGCTCCATCAAGTCCTACAAGATGCCACCATCTTACACCCGCAACAATTCCAGAATGTGATGAGTCTGATGCTTCAACTGTAGACTCTGGCCGCTGGGTCAGTTTCCAGACTGTGGCACCTTCTGTTGCTCCTCCTTCCCCTACATTTAATCTGATGAAACCAGTTAGTCAGCAAAACTCTCTCCAAGATGCAGTTGACAGACATGGAGCAATGGGCTGGGGTGCTACATCTGATAGGGGACGAGGCTCTGAGTTTGAATTTGAGAAATTTGAGAGTGGCACAGTGAAGCCATGGGAGGGTGAGAGAATTCATGAAGTTGGGGTGGATGATTTGGAGCTTACTCTTGGGGGTGGGAAGGCCCGTGGTTAA 960 49.58 MTGRGSSGRTPTWKERENNKRRERRRRAIAAKIYTGLRAQGNYKLPKHCDNNEVLKALCNEAGWVVEEDGTTYRKGCKPPPIDIGTSANMSACSSLQPSPQSSCFPSPVPSYHASPSSSSFPSPTRFDGNPSSYLLPFLQNISSIPANLPPLRISNSAPVTPPLSSPTSRGSKRKPDWESIPNSYVTSFRHPLFAVSAPSSPTRCHHLTPATIPECDESDASTVDSGRWVSFQTVAPSVAPPSPTFNLMKPVSQQNSLQDAVDRHGAMGWGATSDRGRGSEFEFEKFESGTVKPWEGERIHEVGVDDLELTLGGGKARG 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 34062921 34064434 + CrPI670011_04g015430.1 Cre04g1543 495847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre04g1543 319 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 6 318 IPR033264 GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0009742(InterPro)
Cre04g1543 319 MobiDBLite consensus disorder prediction 1 25 - -
Cre04g1543 319 Pfam BES1/BZR1 plant transcription factor, N-terminal 6 129 IPR008540 -
Cre04g1543 319 MobiDBLite consensus disorder prediction 155 179 - -
Cre04g1543 319 MobiDBLite consensus disorder prediction 155 171 - -
Cre04g1543 319 MobiDBLite consensus disorder prediction 10 24 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g0981 Cre-Chr3:8672778 Cre04g1543 Cre-Chr4:34062921 5.80E-55 transposed
Cre07g1384 Cre-Chr7:28736847 Cre04g1543 Cre-Chr4:34062921 1.90E-50 transposed
Cre04g1543 Cre-Chr4:34062921 Cre08g1472 Cre-Chr8:27577388 5.20E-85 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
53497 PF05687 BES1_N 1.70E-64 No_clan Cre TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre04g1543 K14503 - csv:101216171 579.326