Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre04g1720 ATGTTGCTGGTTTATTATTTGTGTTTGAGTTTGTTGTTGGGGAAATCGTGGGCAGCTGCAGCCGGCGGTGATGGCACCACGAGGGAGCTCGATCAGACTCCAACGTGGGCTGTTGCTGGTGTTTGTGCTATTATCATCGTTATTTCTATCGCCTTGGAGAAACTCCTTCACAAAGCTGGAACGTGGCTTACGGAAAAGCACAAGAGGGCTCTTTTTGAAGCTCTGGAGAAAGTTAAAGCTGAGCTGATGATTCTGGGTTTCATTTCACTGCTCCTCACCTTCGGACAGAACTATATCATTAAAATTTGCATTCCCACAAAGGTTGCAAATACTATGTTACCATGTGCAGCGGTCAAAGGGGACAAATTGCAAGATGGAGTCGATGAAGGCGAACATCATCGACGGCTTCTATGGTATGAACGCAGGGTCCTGGCTGCTGCTGGTGGCGCTGTTAGTTGCAAGGAAGGCCATGTGCCGCTTATATCTATCTCGGGATTGCATCAGTTGCACTTATTTATCTTCTTCTTAGCCGTATTTCATGTCGTATACAGTGCTATCACAATGATGCTTGGGAGGCTTAAGATTCGAGGTTGGAAGGCATGGGAGGAAGAGACCTCAACTCACAATTATGAGTTCTCAAATGATAATGCACGATTCAGGCTTACTCACGAAACATCGTTTGTGAAAGCCCACACAAGTTTTTGGACAAAACTTCCTGTCTTCTTTTATATTGGATGCTTCTTCCGACAATTTTTCAGGTCCGTTGGTAAGGCTGACTACTTGGCGTTACGTAATGGATTCATCACCGTTCATCTTGCTCCAGGAAGTAAATTTGACTTTCAAAAATATATAAAAAGGTCTCTGGAAGATGACTTCAAAATAATCGTGGGAGTGAGTCCCCTGCTTTGGGCATCGTTTGTCGTCTTCTTGCTCATAAATGTTTATGGATGGCAAGCATTGTTTTGGACATCCTTAGTCCCTGTGATTATAATCCTGGCTGTTGGAACAAAGCTTCAAGGAATTATGACAAAAATGGCTCTTGAGATTACAGAAAGACATGCTGTTGTGCAAGGAATTCCTCTTGTTCAGGCATCAGATAAATATTTTTGGTTTGGCAAGCCTCAGCTGGTTCTTTACCTCATCCACTTCGCTTTATTTTCGAATGCATTCCAAATAACATACTTCTTCTGGATTTGGTATTCCTTTGGGCTAAAATCCTGCTTCCATACTGATTTCAAGCTAGCAATCGTAAAAGTTGCTCTCGGGGTTGGCGTTCTCTGTCTTTGCAGTTATATTACTCTTCCACTCTATGCTCTTGTGACTCAGATGGGTACGCGTATGAAGAAATCGATCTTTGACGAACAAACATCGAAGGCCCTCAAGAAGTGGCACATGGCTGTTAAGAAGCGACATGGAAAGTCCCCAACTCGAAAGCTAGGGAGTCCAAATGCGTCGCCAATGCATTCATCATCTGGATACACATTGCATCGTTTCAAGACAACAGGTCACTCAAACAGATCATCCATGTATGACGAAAATGATGCATCTGATTATGAAGTTGATCCGTTGTCGCCTAAAGTTGATACTCCAAATTTTACGGTTAGAATAGACCGCGCCAATGAACATCAAACTGAAATAATTGAATCCCAGCATACAGAAAAAAGGAATGAAGACGATTTCTCATTTGCCAAGCCTGGACCGACGAAAGGACCATGA 1716 43.18 MLLVYYLCLSLLLGKSWAAAAGGDGTTRELDQTPTWAVAGVCAIIIVISIALEKLLHKAGTWLTEKHKRALFEALEKVKAELMILGFISLLLTFGQNYIIKICIPTKVANTMLPCAAVKGDKLQDGVDEGEHHRRLLWYERRVLAAAGGAVSCKEGHVPLISISGLHQLHLFIFFLAVFHVVYSAITMMLGRLKIRGWKAWEEETSTHNYEFSNDNARFRLTHETSFVKAHTSFWTKLPVFFYIGCFFRQFFRSVGKADYLALRNGFITVHLAPGSKFDFQKYIKRSLEDDFKIIVGVSPLLWASFVVFLLINVYGWQALFWTSLVPVIIILAVGTKLQGIMTKMALEITERHAVVQGIPLVQASDKYFWFGKPQLVLYLIHFALFSNAFQITYFFWIWYSFGLKSCFHTDFKLAIVKVALGVGVLCLCSYITLPLYALVTQMGTRMKKSIFDEQTSKALKKWHMAVKKRHGKSPTRKLGSPNASPMHSSSGYTLHRFKTTGHSNRSSMYDENDASDYEVDPLSPKVDTPNFTVRIDRANEHQTEIIESQHTEKRNEDDFSFAKPGPTKGP 571
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 35340647 35345253 + CrPI670011_04g017200.1 Cre04g1720 496024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre04g1720 571 PANTHER MLO-LIKE PROTEIN 1 24 544 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Cre04g1720 571 MobiDBLite consensus disorder prediction 478 511 - -
Cre04g1720 571 Pfam Mlo family 28 489 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Cre04g1720 571 MobiDBLite consensus disorder prediction 538 562 - -
Cre04g1720 571 MobiDBLite consensus disorder prediction 467 571 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g0540 Cre-Chr3:4067205 Cre04g1720 Cre-Chr4:35340647 1.50E-143 dispersed
Cre04g1720 Cre-Chr4:35340647 Cre08g0871 Cre-Chr8:21835728 8.50E-171 dispersed
Cre10g0276 Cre-Chr10:1660330 Cre04g1720 Cre-Chr4:35340647 7.50E-199 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre04g1720 K08472 - csv:101212923 1037.71