Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre04g1720 ATGTTGCTGGTTTATTATTTGTGTTTGAGTTTGTTGTTGGGGAAATCGTGGGCAGCTGCAGCCGGCGGTGATGGCACCACGAGGGAGCTCGATCAGACTCCAACGTGGGCTGTTGCTGGTGTTTGTGCTATTATCATCGTTATTTCTATCGCCTTGGAGAAACTCCTTCACAAAGCTGGAACGTGGCTTACGGAAAAGCACAAGAGGGCTCTTTTTGAAGCTCTGGAGAAAGTTAAAGCTGAGCTGATGATTCTGGGTTTCATTTCACTGCTCCTCACCTTCGGACAGAACTATATCATTAAAATTTGCATTCCCACAAAGGTTGCAAATACTATGTTACCATGTGCAGCGGTCAAAGGGGACAAATTGCAAGATGGAGTCGATGAAGGCGAACATCATCGACGGCTTCTATGGTATGAACGCAGGGTCCTGGCTGCTGCTGGTGGCGCTGTTAGTTGCAAGGAAGGCCATGTGCCGCTTATATCTATCTCGGGATTGCATCAGTTGCACTTATTTATCTTCTTCTTAGCCGTATTTCATGTCGTATACAGTGCTATCACAATGATGCTTGGGAGGCTTAAGATTCGAGGTTGGAAGGCATGGGAGGAAGAGACCTCAACTCACAATTATGAGTTCTCAAATGATAATGCACGATTCAGGCTTACTCACGAAACATCGTTTGTGAAAGCCCACACAAGTTTTTGGACAAAACTTCCTGTCTTCTTTTATATTGGATGCTTCTTCCGACAATTTTTCAGGTCCGTTGGTAAGGCTGACTACTTGGCGTTACGTAATGGATTCATCACCGTTCATCTTGCTCCAGGAAGTAAATTTGACTTTCAAAAATATATAAAAAGGTCTCTGGAAGATGACTTCAAAATAATCGTGGGAGTGAGTCCCCTGCTTTGGGCATCGTTTGTCGTCTTCTTGCTCATAAATGTTTATGGATGGCAAGCATTGTTTTGGACATCCTTAGTCCCTGTGATTATAATCCTGGCTGTTGGAACAAAGCTTCAAGGAATTATGACAAAAATGGCTCTTGAGATTACAGAAAGACATGCTGTTGTGCAAGGAATTCCTCTTGTTCAGGCATCAGATAAATATTTTTGGTTTGGCAAGCCTCAGCTGGTTCTTTACCTCATCCACTTCGCTTTATTTTCGAATGCATTCCAAATAACATACTTCTTCTGGATTTGGTATTCCTTTGGGCTAAAATCCTGCTTCCATACTGATTTCAAGCTAGCAATCGTAAAAGTTGCTCTCGGGGTTGGCGTTCTCTGTCTTTGCAGTTATATTACTCTTCCACTCTATGCTCTTGTGACTCAGATGGGTACGCGTATGAAGAAATCGATCTTTGACGAACAAACATCGAAGGCCCTCAAGAAGTGGCACATGGCTGTTAAGAAGCGACATGGAAAGTCCCCAACTCGAAAGCTAGGGAGTCCAAATGCGTCGCCAATGCATTCATCATCTGGATACACATTGCATCGTTTCAAGACAACAGGTCACTCAAACAGATCATCCATGTATGACGAAAATGATGCATCTGATTATGAAGTTGATCCGTTGTCGCCTAAAGTTGATACTCCAAATTTTACGGTTAGAATAGACCGCGCCAATGAACATCAAACTGAAATAATTGAATCCCAGCATACAGAAAAAAGGAATGAAGACGATTTCTCATTTGCCAAGCCTGGACCGACGAAAGGACCATGA 1716 43.18 MLLVYYLCLSLLLGKSWAAAAGGDGTTRELDQTPTWAVAGVCAIIIVISIALEKLLHKAGTWLTEKHKRALFEALEKVKAELMILGFISLLLTFGQNYIIKICIPTKVANTMLPCAAVKGDKLQDGVDEGEHHRRLLWYERRVLAAAGGAVSCKEGHVPLISISGLHQLHLFIFFLAVFHVVYSAITMMLGRLKIRGWKAWEEETSTHNYEFSNDNARFRLTHETSFVKAHTSFWTKLPVFFYIGCFFRQFFRSVGKADYLALRNGFITVHLAPGSKFDFQKYIKRSLEDDFKIIVGVSPLLWASFVVFLLINVYGWQALFWTSLVPVIIILAVGTKLQGIMTKMALEITERHAVVQGIPLVQASDKYFWFGKPQLVLYLIHFALFSNAFQITYFFWIWYSFGLKSCFHTDFKLAIVKVALGVGVLCLCSYITLPLYALVTQMGTRMKKSIFDEQTSKALKKWHMAVKKRHGKSPTRKLGSPNASPMHSSSGYTLHRFKTTGHSNRSSMYDENDASDYEVDPLSPKVDTPNFTVRIDRANEHQTEIIESQHTEKRNEDDFSFAKPGPTKGP 571
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 35340647 35345253 + CrPI670011_04g017200.1 Cre04g1720 496024

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cre04g1720 571 PANTHER MLO-LIKE PROTEIN 1 24 544 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Cre04g1720 571 MobiDBLite consensus disorder prediction 478 511 - -
Cre04g1720 571 Pfam Mlo family 28 489 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Cre04g1720 571 MobiDBLite consensus disorder prediction 538 562 - -
Cre04g1720 571 MobiDBLite consensus disorder prediction 467 571 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre04g1720 K08472 - - csv:101212923 1037.71
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g0540 Cre-Chr3:4067205 Cre04g1720 Cre-Chr4:35340647 1.50E-143 dispersed
Cre04g1720 Cre-Chr4:35340647 Cre08g0871 Cre-Chr8:21835728 8.50E-171 dispersed
Cre10g0276 Cre-Chr10:1660330 Cre04g1720 Cre-Chr4:35340647 7.50E-199 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi10g152 . . Bda02g00508 . . Bpe01g00450 . . . . Cma03g01297 Cma07g00379 . Car07g00331 . . Cpe10g00718 Bhi03g00355 Tan03g2523 . . . . . Cla01g02044 Cam01g2152 Cec04g1809 Cco04g1876 Clacu01g2168 Cmu01g2043 Cre04g1720 . Cone5ag1684 . . Lsi01g00525 Csa06g03661 . Cme08g00265 . Blo14g00412 . . . . . Bma11g00425 . Cmo03g00647 Cmo07g00374 . . . . Cpe19g00902 . . . . . . . . . . . . . . . . . Chy02g00500 .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cre11g2216 . 5 547 MLO family AT5G53760 68.8 1.5e-212 736.1
Cre05g1133 . 6 466 MLO family AT5G53760 51.6 9.0e-128 454.5
Cre01g0581 . 10 333 MLO family AT5G53760 69.5 9.3e-125 444.5
Cre01g0582 . 39 266 MLO family AT5G53760 67.7 2.7e-84 310.1
Cre11g2216 . 1 528 MLO family AT1G26700 68.3 8.5e-208 720.3
Cre01g0581 . 1 333 MLO family AT1G26700 67.9 9.9e-124 441.0
Cre01g0582 . 39 266 MLO family AT1G26700 65.7 2.3e-80 297.0
Cre03g0540 . 8 536 MLO family AT2G39200 63.9 1.4e-192 669.8
Cre05g2268 . 7 499 MLO family AT2G39200 67.7 8.9e-192 667.2
Cre02g2410 . 8 505 MLO family AT2G39200 67.3 5.7e-191 664.5
Cre02g2410 . 1 416 MLO family AT1G61560 65.9 4.9e-160 561.2
Cre03g0540 . 1 416 MLO family AT1G61560 66.3 3.0e-157 552.0
Cre05g2268 . 7 408 MLO family AT1G61560 65.2 1.0e-152 537.0
Cre04g1720 . 28 422 MLO family AT1G61560 52.2 2.2e-115 412.9
Cre10g0276 . 29 423 MLO family AT1G61560 50.4 1.4e-109 393.7
Cre04g1720 . 18 490 MLO family AT2G17430 63.4 3.3e-172 602.1
Cre10g0276 . 29 490 MLO family AT2G17430 63.4 6.4e-160 561.2
Cre08g0871 . 4 468 MLO family AT2G17430 56.5 7.9e-142 501.1
Cre04g1720 . 7 567 MLO family AT2G17480 63.2 3.6e-196 681.8
Cre10g0276 . 5 574 MLO family AT2G17480 59.1 5.7e-178 621.3
Cre08g0871 . 11 453 MLO family AT2G17480 59.7 3.6e-148 522.3
Cre03g0540 . 8 463 MLO family AT2G17480 52.4 2.5e-125 446.4
Cre02g2410 . 8 463 MLO family AT2G17480 50.3 4.8e-124 442.2
Cre08g0871 . 1 383 MLO family AT1G42560 60.5 1.2e-131 466.8
Cre04g1720 . 28 386 MLO family AT1G42560 58.7 1.6e-120 429.9
Cre10g0276 . 29 388 MLO family AT1G42560 56.7 6.0e-112 401.4
Cre06g0828 . 6 419 MLO family AT4G24250 54.2 6.6e-117 417.9
Cre02g0375 . 43 329 MLO family AT4G24250 51.8 1.1e-79 294.3
Cre04g1720 . 8 387 MLO family AT5G65970 66.6 2.6e-144 509.2
Cre10g0276 . 28 388 MLO family AT5G65970 66.2 2.0e-136 483.0
Cre08g0871 . 7 381 MLO family AT5G65970 59.6 2.0e-125 446.4
Cre02g2410 . 2 381 MLO family AT5G65970 51.8 1.1e-105 380.9
Cre03g0540 . 2 381 MLO family AT5G65970 50.7 9.3e-102 367.9
Cre08g0871 . 2 531 MLO family AT2G33670 58.4 2.8e-165 578.9
Cre04g1720 . 20 470 MLO family AT2G33670 61.6 5.6e-158 554.7
Cre10g0276 . 29 471 MLO family AT2G33670 58.9 2.8e-141 499.2
Cre05g2268 . 64 525 MLO family AT1G11310 64.3 2.5e-169 592.4
Cre03g0540 . 63 506 MLO family AT1G11310 64.9 4.8e-165 578.2
Cre02g2410 . 63 520 MLO family AT1G11310 62.7 3.4e-163 572.0
Cre06g0828 . 5 501 MLO family AT2G44110 59.5 2.1e-165 579.3
Cre06g0828 . 1 508 MLO family AT4G02600 72.9 9.8e-214 740.0
Cre05g1133 . 3 560 MLO family AT1G11000 66.6 7.7e-212 733.8
Cre10g0325 . 1 494 MLO family AT1G11000 51.7 2.5e-130 463.0
Cre01g0581 . 10 236 MLO family AT1G11000 51.3 2.1e-68 257.3
Cre06g0828 . 1 508 MLO family AT4G02600 72.9 9.8e-214 740.0
Cre05g2268 . 64 525 MLO family AT1G11310 64.3 2.5e-169 592.4
Cre03g0540 . 63 506 MLO family AT1G11310 64.9 4.8e-165 578.2
Cre02g2410 . 63 520 MLO family AT1G11310 62.7 3.4e-163 572.0
Cre05g1133 . 3 560 MLO family AT1G11000 66.6 7.7e-212 733.8
Cre10g0325 . 1 494 MLO family AT1G11000 51.7 2.5e-130 463.0
Cre01g0581 . 10 236 MLO family AT1G11000 51.3 2.1e-68 257.3
Cre08g0871 . 2 531 MLO family AT2G33670 58.4 2.8e-165 578.9
Cre04g1720 . 20 470 MLO family AT2G33670 61.6 5.6e-158 554.7
Cre10g0276 . 29 471 MLO family AT2G33670 58.9 2.8e-141 499.2
Cre02g2410 . 1 416 MLO family AT1G61560 65.9 4.9e-160 561.2
Cre03g0540 . 1 416 MLO family AT1G61560 66.3 3.0e-157 552.0
Cre05g2268 . 7 408 MLO family AT1G61560 65.2 1.0e-152 537.0
Cre04g1720 . 28 422 MLO family AT1G61560 52.2 2.2e-115 412.9
Cre10g0276 . 29 423 MLO family AT1G61560 50.4 1.4e-109 393.7
Cre04g1720 . 18 490 MLO family AT2G17430 63.4 3.3e-172 602.1
Cre10g0276 . 29 490 MLO family AT2G17430 63.4 6.4e-160 561.2
Cre08g0871 . 4 468 MLO family AT2G17430 56.5 7.9e-142 501.1
Cre04g1720 . 7 567 MLO family AT2G17480 63.2 3.6e-196 681.8
Cre10g0276 . 5 574 MLO family AT2G17480 59.1 5.7e-178 621.3
Cre08g0871 . 11 453 MLO family AT2G17480 59.7 3.6e-148 522.3
Cre03g0540 . 8 463 MLO family AT2G17480 52.4 2.5e-125 446.4
Cre02g2410 . 8 463 MLO family AT2G17480 50.3 4.8e-124 442.2
Cre08g0871 . 1 383 MLO family AT1G42560 60.5 1.2e-131 466.8
Cre04g1720 . 28 386 MLO family AT1G42560 58.7 1.6e-120 429.9
Cre10g0276 . 29 388 MLO family AT1G42560 56.7 6.0e-112 401.4
Cre04g1720 . 8 387 MLO family AT5G65970 66.6 2.6e-144 509.2
Cre10g0276 . 28 388 MLO family AT5G65970 66.2 2.0e-136 483.0
Cre08g0871 . 7 381 MLO family AT5G65970 59.6 2.0e-125 446.4
Cre02g2410 . 2 381 MLO family AT5G65970 51.8 1.1e-105 380.9
Cre03g0540 . 2 381 MLO family AT5G65970 50.7 9.3e-102 367.9
Cre11g2216 . 5 547 MLO family AT5G53760 68.8 1.5e-212 736.1
Cre05g1133 . 6 466 MLO family AT5G53760 51.6 9.0e-128 454.5
Cre01g0581 . 10 333 MLO family AT5G53760 69.5 9.3e-125 444.5
Cre01g0582 . 39 266 MLO family AT5G53760 67.7 2.7e-84 310.1
Cre03g0540 . 8 536 MLO family AT2G39200 63.9 1.4e-192 669.8
Cre05g2268 . 7 499 MLO family AT2G39200 67.7 8.9e-192 667.2
Cre02g2410 . 8 505 MLO family AT2G39200 67.3 5.7e-191 664.5
Cre06g0828 . 6 419 MLO family AT4G24250 54.2 6.6e-117 417.9
Cre02g0375 . 43 329 MLO family AT4G24250 51.8 1.1e-79 294.3
Cre11g2216 . 1 528 MLO family AT1G26700 68.3 8.5e-208 720.3
Cre01g0581 . 1 333 MLO family AT1G26700 67.9 9.9e-124 441.0
Cre01g0582 . 39 266 MLO family AT1G26700 65.7 2.3e-80 297.0
Cre06g0828 . 5 501 MLO family AT2G44110 59.5 2.1e-165 579.3
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000765 3 4 3 4 2 3 4 3 3 3 2 3 4 3 3 4 2 3 4 3 3 3 3 3 3 3 2 6 2 2 93