Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre04g1759 ATGCAAGCATCCCAGAATCGGCAGGCTTCATCTGTGATCCATGAGATGTATCAACAGTCTGTGCAAGAGATGGATCCTTACTATTTATCTCATTTTCACGTATTGGGAAACCATGTCTCTCCTGACACAAGCAGCCAGGGAAACAGTGTTAACTTCTCTTCCTGTAAGGATCAGTTCTTTACTCTGGAATCATTCCCGGCTACTGCTGATCTGAGTGCCTGTAATTCACCTTCTGCTGTGAGTGTTCTGTCTTCCAGGAGCCCCTTCTCACCTCAAGGTTCTCAGTCATGCTCTTCAGATCAACACCATTCCTTTGACAACACATGCGGATCACCTCTAAGTGGATGCTCTGTAACTGATGACGATAACGAATTAAAGCACAAGCTGAAAGAATTAGAAATTTCTTTGCTGGGGCCTGAATCTGATATTGTGGATAGCTGCTACTGTTCTTTCAGGGGTGGGGGTCATCGAGATGCTTCCATGGCAAGGCGGAACTGGAATCAAGTGGTTGAAATGATTCCTAGATTAAGTCTTCAAGACACGCTTATCCATTGTGCCCAAGCGATTCATGATTCTGATCTAAATGTGGCAACATTATTTTTGGATGTTTTAGGGCAGATGGTTTCTGTCTCTGGTGATCCAGCCCAGAGGTTGGGAGCTTACTTGTTGGAAGGGCTTAGAGCGAGGTTGGAACGATCTGGAAGTGCAATATACAAGGCCTTAAAGTGTGAAGAGCCAACAAGCTCTGAACTAATGTCATATATGTCTATTCTATTCCAGATCTGCCCGTACTTCAAATTTGGTTACACTTCTGCGAATGCTGTCATTTGGGAGGCCATGGTAAATGAACCAATAATCCACATTATTGATTTTCAAATCGCACAGGGTAGTCAGTATATACCTCTCATCGATGATCTTGCCAATCGGCCTGGTGGACCCCCAGTTCTTCGCATTACAGGTGTGGACGATTCCCAATCAGCTCATGCTCGGGGAGGGGGACTACAAATTGTGGGACAGAAGTTAGCTCAGCTGGCTCAATCAAAAGGAATTCCCTTCCAATTTCATGCAGCTGCAATGTCTGGTTGCGAGGTCGAACGCAGTAATCTTAGAATACGACCCGGAGAAGCCTTGGCCGTAAATTTTCCATACGCCTTACACCACATGCCGGATGAGAGCGTGAGCACACAGAATCACCGAGACCGGCTTCTAAGGCTAGTTAAGAGTCTATCACCGAAAGTAGTAACCATTGTTGAGCAGGAATCCAACACCAACACATCCCCGTTCCTTCTTCGCTTTATAGAGACACTAGATTATTACACTGCTATGTTTGAGTCAATAGATGTAGCTCGTTCAAGAGACGACAAGCAGCGAATCAGGGCAGAGCAACACTGTGTCGCCCGAGACATAGTGAACATGGTAGCTTGTGAAGGGTTTGAAAGGGTAGAGCGTCATGAACTCCTTGGCAAGTGGAGGATGAGAATGAGAATGGCTGGTTTCACTCCATGTCCAATGAGCTCCTCTGTAACTGGAGCTGTCAAGAATATGTTGAGGGATTTCAACGAGAACTACAGACTCCAAGAAGTGGATGGCGCTATCTACCTTGGCTGGAAAAACAGAGCAATGGCAACCTCCTCTGCATGGAGATAA 1647 45.9 MQASQNRQASSVIHEMYQQSVQEMDPYYLSHFHVLGNHVSPDTSSQGNSVNFSSCKDQFFTLESFPATADLSACNSPSAVSVLSSRSPFSPQGSQSCSSDQHHSFDNTCGSPLSGCSVTDDDNELKHKLKELEISLLGPESDIVDSCYCSFRGGGHRDASMARRNWNQVVEMIPRLSLQDTLIHCAQAIHDSDLNVATLFLDVLGQMVSVSGDPAQRLGAYLLEGLRARLERSGSAIYKALKCEEPTSSELMSYMSILFQICPYFKFGYTSANAVIWEAMVNEPIIHIIDFQIAQGSQYIPLIDDLANRPGGPPVLRITGVDDSQSAHARGGGLQIVGQKLAQLAQSKGIPFQFHAAAMSGCEVERSNLRIRPGEALAVNFPYALHHMPDESVSTQNHRDRLLRLVKSLSPKVVTIVEQESNTNTSPFLLRFIETLDYYTAMFESIDVARSRDDKQRIRAEQHCVARDIVNMVACEGFERVERHELLGKWRMRMRMAGFTPCPMSSSVTGAVKNMLRDFNENYRLQEVDGAIYLGWKNRAMATSSAWR 548
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 35605072 35606718 + CrPI670011_04g017590.1 Cre04g1759 496063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre04g1759 548 ProSiteProfiles GRAS family profile. 169 548 IPR005202 -
Cre04g1759 548 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 150 547 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Cre04g1759 548 Pfam GRAS domain family 179 548 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre04g1759 Cre-Chr4:35605072 Cre10g0686 Cre-Chr10:6513436 4.70E-150 dispersed
Cre04g1759 Cre-Chr4:35605072 Cre03g0450 Cre-Chr3:2911442 2.20E-51 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
53519 PF03514 GRAS 6.30E-127 CL0063 Cre TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre04g1759 K27748 - csv:101207883 996.882