Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre04g1775 ATGGCGACCTCATGTTTCGGTTCACTTAGGATTCGTAAATCGAAGAGCAAACCCTTATCAACCCCTTCCTCGTTGAAATCCCAGATGAATTCTGAAATGGAAAATATGGAAAGGAGAAGATTTGATAGTTTGGAATCGTGGTCAATGATCCTAGAGTCTGAAAATGTGGAAACCTGGGAGACAGCAAAGGAGGATCAGGAGGAGTGGACAGCTGATCTATCTCAACTCTTCATTGGTAACAAATTTGCCTCTGGTGCTCACAGTCGGATTTACCGTGGAATTTACAAGCAGAGAGCCGTTGCTGTGAAGATGGTTAGAATTCCAAACCAAAAAGAGGAAACAAGAGCCAAACTCGAGCAACAGTTCAAGTCTGAAGTCGCCTTGCTTTCTCGTCTCTTTCATCCCAACATAGTTCAGTTCATTGCAGCCTGTAAAAAGCCACCTGTATACTGCATAATTACAGAGTATATGTCACAAGGAACTCTGAGGATGTATCTTAACAAGAAAGAGCCATATTCACTCTCAACAGAAACAATATTGAGGTTAGCTCTTGACATATCAAGAGGAATGGAATACCTCCATTCCCAAGGAGTAATCCACAGAGACCTCAAATCAAACAACTTGCTTCTAAATGATGAAATGAGAGTAAAAGTAGCCGATTTCGGAACATCCTGCCTCGAAACACAGTGCCGAGAATCAAAAGGGAACATGGGAACTTACCGATGGATGGCGCCGGAGATGATCAAGGAGAAGCCTTATACTCGCAAAGTTGATGTGTACAGCTTTGGGATTGTGCTGTGGGAGCTTACCACGGCTCTGCTTCCGTTTCAAGGGATGACCCCCGTGCAAGCTGCCTTTGCCGTCGCCGAGAAGAATGAGAGGCCACCATTACCGGCGAGTTGTCAGCCGGCACTAGCCCACCTGATAAAGCGGTGTTGGGCGGCAAATCCGTCGAAGCGGCCGGATTTCAGCGACATTGTGGTGGCTTTGGAGAAATACGATGAGTGTGTGAAAGAGGGTCTTCCCCTTGCACACCATAGAAGATTGGTAAACCGAAACGCCATTATTGAACGCTTGAAAGCTTGCGCTTCAACCAGTTCTTCAATCCCTGTACATGCCTAA 1122 45.9 MATSCFGSLRIRKSKSKPLSTPSSLKSQMNSEMENMERRRFDSLESWSMILESENVETWETAKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQKEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETILRLALDISRGMEYLHSQGVIHRDLKSNNLLLNDEMRVKVADFGTSCLETQCRESKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKNERPPLPASCQPALAHLIKRCWAANPSKRPDFSDIVVALEKYDECVKEGLPLAHHRRLVNRNAIIERLKACASTSSSIPVHA 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 35707722 35709131 - CrPI670011_04g017750.1 Cre04g1775 496079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre04g1775 373 PANTHER SERINE-THREONINE PROTEIN KINASE 55 331 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cre04g1775 373 CDD STKc_MAP3K-like 83 327 - -
Cre04g1775 373 PRINTS Tyrosine kinase catalytic domain signature 238 248 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre04g1775 373 PRINTS Tyrosine kinase catalytic domain signature 154 167 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre04g1775 373 PRINTS Tyrosine kinase catalytic domain signature 301 323 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre04g1775 373 PRINTS Tyrosine kinase catalytic domain signature 192 210 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre04g1775 373 PRINTS Tyrosine kinase catalytic domain signature 257 279 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre04g1775 373 ProSiteProfiles Protein kinase domain profile. 76 349 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre04g1775 373 SMART serkin_6 76 337 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre04g1775 373 SUPERFAMILY Protein kinase-like (PK-like) 52 327 IPR011009 -
Cre04g1775 373 FunFam Serine/threonine-protein kinase isoform 1 66 158 - -
Cre04g1775 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre04g1775 373 MobiDBLite consensus disorder prediction 14 31 - -
Cre04g1775 373 Pfam Protein tyrosine and serine/threonine kinase 79 329 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre04g1775 373 FunFam serine/threonine-protein kinase HT1 159 352 - -
Cre04g1775 373 Gene3D Transferase(Phosphotransferase) domain 1 159 354 - -
Cre04g1775 373 Gene3D Phosphorylase Kinase; domain 1 65 158 - -
Cre04g1775 373 MobiDBLite consensus disorder prediction 13 32 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre01g1270 Cre-Chr1:25948455 Cre04g1775 Cre-Chr4:35707722 4.50E-107 dispersed
Cre03g0903 Cre-Chr3:7784446 Cre04g1775 Cre-Chr4:35707722 3.40E-88 dispersed
Cre04g1775 Cre-Chr4:35707722 Cre04g1918 Cre-Chr4:36749287 1.10E-89 dispersed
Cre02g0739 Cre-Chr2:4229029 Cre04g1775 Cre-Chr4:35707722 3.70E-65 transposed
Cre05g1696 Cre-Chr5:28465568 Cre04g1775 Cre-Chr4:35707722 7.50E-67 transposed
Cre08g0638 Cre-Chr8:19301851 Cre04g1775 Cre-Chr4:35707722 9.00E-62 transposed
Cre10g0303 Cre-Chr10:1911369 Cre04g1775 Cre-Chr4:35707722 1.90E-69 transposed
Cre11g1556 Cre-Chr11:25129522 Cre04g1775 Cre-Chr4:35707722 1.10E-78 transposed
Cre03g0716 Cre-Chr3:6040361 Cre04g1775 Cre-Chr4:35707722 1.30E-39 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64076 PF07714 PK_Tyr_Ser-Thr 5.30E-68 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre04g1775 - - - 0.0