Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre04g1843 ATGGGAAGGTTGAGTTTAGAAGCGCTTTTCTTCGTTCTCGCAGCCTCACAATTCATATTTCCCACAACTTCTCAGCCACCCTTCTTATATCGCATCTGTTCCGACAAAGCCAACTACACCGCCGGCAGTCCTTTCAAGAAAAATCTCCACAACGTACTTCTCTCCATCTCTTCCAACACCCAAATCGATTACGGTTTCTACAACGCCACCTCCGGCAAAGATCCCAACACAGCCACCGCTTTGGCTCTTTGCCGTGGAGGCGCTCCGTTGGAACAATGTAGAAGCTGTGTGTATAACTCAACGCTCAGGATTACTCAAGATTGTCCAAACCAGAGAGAAGCAGAGGGATGGTACCAGGATTGTCAAATTCGTTACTCAAACAACACAATTTATGGCGTCGGAGACAACACTGTACAGATAATCTTCTGGAACTTTGCAAAAGCGGAAGACCCGGACGGGTTTAATGTGGCGGTGAGGAATTTGTTCGATCGGCTGCGAGTGGAGGCTGCGTCGGGGAGTTCTATTAAGAAATCGGCTTGGGGAGGGGAGAAGATTCCAAGTCCCAGCATGGATACTGTATATGGATTGGTTGATTGTTTTCCTGATTTGTCTTACTTGGATTGTTTAAGCTGCCTCAATCAGCTTCAAACAACTCTTCCTAATTGTTGTAATGCGAGCATAGGGGTGAGATTAATTGCAACTAGTTGTCAACTCAATTACGAGCTCCACCCCATTTATCCTCCGCTTTCGTCTCCGCCTCTGTCTCCTCATTCTCCTCCTCCTCTGCCCTCACCCTTGTCATCTTCGCCTTCAAGACCTGGAACTAACGGCAATATTGGTAGAACTAGAACTGTTATAATCATTGTGGTGACCATCGTTTCTGCTGTCATTCTTCTTGGCATTATTGTTATTTTGATATTGAGGAAGCAAAATCACAAAACATCATTAGACAATTCCGAAGATTTGTCTCTCGGAGACACCACGGTTGAAATTAGCAGCATGGAGATGATTCAATTTGATTTTGATAGCGTTAAAGCTGCAACAAATGACTTTGCAAGTGAAAACAAGCTCGGACAAGGTGGATTTGGAGCTGTTTATAAGGGTAAGCTACCTAATGGACGACTAATAGCTGTGAAGAGGCTTGCGAATAATTCACAACAAGGGGATGTTGAATTCAAAAATGAAGTCCTTTTGGTGGTCAAGCTTCAACATCGTAACTTGGTTAGGCTACTTGGGTTCTGCTTGCAAAGAAGCGAAAGACTTCTCATATATGAGTTTGTACAAAATGGCAGCCTTGACCACTTTATATTTGATTTTGCAAAGCGGTCGCTATTAGATTGGGAAACACGTTTCAAAATCATAAATGGCATTGCGAGAGGACTTCTTTACCTTCATGAAGATTCTCGTCATCGAATCATACATCGCGATCTTAAAGCTAGCAATATTTTGTTGGATACGAAAATGAATTCAAAGATTTCAGATTTTGGTATGGCAAGATTGTTCGAAGTAGATCAAACTCAAGGCAATACAAGTAGAATTGTGGGAACTTATGGCTATATGGCTCCAGAGTATGTAAAGCGTGGGCAATTCTCAATAAAATCAGATGTTTTTAGCTTTGGTGTCTTGGTTCTTGAGATTTTGAGTGGTCAAAGAAACAATAATTTTCACAATGGAGAACACTACAAAAATCTCTTAAGCTTTGCATGGACAAATTGGAGGGCAGGAACAACTACAAATGTCATAGATTCCACCCTTAGTATTGGTTCAAGGATCGAGATGATAAGATGCATTCATATTGGACTATTGTGTGTTCAAGAAAGTATAACCAATCGACCAACAATGACTTCAGTAGTTACGATGCTCAGTAGTTCTTCTTTCACTCTTCCTATACCCTCTAAACCAGGATTCTTCCTACATAGTCTTACCAACAGATCAAACAAACTCTTAAAGTTAGATGGAAATAGTTGTGAAAGCCCGTCTATTCAACTTTCGAAGAATGACATTTCAATTACAGAGATCCATCCACGTTAA 2031 41.56 MGRLSLEALFFVLAASQFIFPTTSQPPFLYRICSDKANYTAGSPFKKNLHNVLLSISSNTQIDYGFYNATSGKDPNTATALALCRGGAPLEQCRSCVYNSTLRITQDCPNQREAEGWYQDCQIRYSNNTIYGVGDNTVQIIFWNFAKAEDPDGFNVAVRNLFDRLRVEAASGSSIKKSAWGGEKIPSPSMDTVYGLVDCFPDLSYLDCLSCLNQLQTTLPNCCNASIGVRLIATSCQLNYELHPIYPPLSSPPLSPHSPPPLPSPLSSSPSRPGTNGNIGRTRTVIIIVVTIVSAVILLGIIVILILRKQNHKTSLDNSEDLSLGDTTVEISSMEMIQFDFDSVKAATNDFASENKLGQGGFGAVYKGKLPNGRLIAVKRLANNSQQGDVEFKNEVLLVVKLQHRNLVRLLGFCLQRSERLLIYEFVQNGSLDHFIFDFAKRSLLDWETRFKIINGIARGLLYLHEDSRHRIIHRDLKASNILLDTKMNSKISDFGMARLFEVDQTQGNTSRIVGTYGYMAPEYVKRGQFSIKSDVFSFGVLVLEILSGQRNNNFHNGEHYKNLLSFAWTNWRAGTTTNVIDSTLSIGSRIEMIRCIHIGLLCVQESITNRPTMTSVVTMLSSSSFTLPIPSKPGFFLHSLTNRSNKLLKLDGNSCESPSIQLSKNDISITEIHPR 676
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 36172712 36175431 + CrPI670011_04g018430.1 Cre04g1843 496147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre04g1843 676 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 94 637 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cre04g1843 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre04g1843 676 SMART serkin_6 351 602 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre04g1843 676 Gene3D Transferase(Phosphotransferase) domain 1 427 627 - -
Cre04g1843 676 MobiDBLite consensus disorder prediction 251 277 - -
Cre04g1843 676 Gene3D Phosphorylase Kinase; domain 1 313 426 - -
Cre04g1843 676 ProSiteProfiles Gnk2-homologous domain profile. 27 130 IPR002902 -
Cre04g1843 676 Pfam Protein tyrosine and serine/threonine kinase 354 619 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre04g1843 676 SUPERFAMILY Protein kinase-like (PK-like) 330 621 IPR011009 -
Cre04g1843 676 ProSiteProfiles Gnk2-homologous domain profile. 136 245 IPR002902 -
Cre04g1843 676 ProSiteProfiles Protein kinase domain profile. 351 627 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre04g1843 676 MobiDBLite consensus disorder prediction 251 268 - -
Cre04g1843 676 Gene3D - 135 244 IPR038408 -
Cre04g1843 676 Gene3D - 26 129 IPR038408 -
Cre04g1843 676 FunFam Cysteine-rich receptor-like protein kinase 28 427 629 - -
Cre04g1843 676 FunFam Cysteine-rich receptor-like protein kinase 10 308 426 - -
Cre04g1843 676 Pfam Salt stress response/antifungal 150 242 IPR002902 -
Cre04g1843 676 Pfam Salt stress response/antifungal 33 127 IPR002902 -
Cre04g1843 676 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 26 130 - -
Cre04g1843 676 CDD STKc_IRAK 357 621 - -
Cre04g1843 676 ProSitePatterns Protein kinases ATP-binding region signature. 357 379 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre04g1651 Cre-Chr4:34890768 Cre04g1843 Cre-Chr4:36172712 9.90E-84 dispersed
Cre04g1840 Cre-Chr4:36140352 Cre04g1843 Cre-Chr4:36172712 1.00E-197 dispersed
Cre04g1841 Cre-Chr4:36148341 Cre04g1843 Cre-Chr4:36172712 4.50E-199 dispersed
Cre04g1843 Cre-Chr4:36172712 Cre04g1845 Cre-Chr4:36182559 2.00E-198 dispersed
Cre04g1842 Cre-Chr4:36164430 Cre04g1843 Cre-Chr4:36172712 8.60E-164 tandem
Cre04g1843 Cre-Chr4:36172712 Cre04g1844 Cre-Chr4:36177550 3.60E-200 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64082 PF00069 Pkinase 3.00E-48 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre04g1843 - - - 0.0