Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre04g1927 ATGGCTCTGAATCTCAGACTCCATACACTCATATTCCTTCTCCTTCTCTTCTCCTTCTGTACTCCATCATTTTCAGATTCAATTCCATCTCCCAATTCCCAATGCGAAGCTCAGCTGCAACAAGGCTGCCATGACAGAGCCAAGGCCCTCAAACTCAAGCTCATCGCCATCGCTTCCATTTTAGTCGCGAGCATGATCGGCGTTTGTCTTCCCCTCTTCTCCCGCGCCGTGCCGGTGCTTCAACCAGAGAGAAAGCCCTTCGCAATCGTTAAGGCATTTGCCTCCGGTGTGATTCTAGCCACTGGATATATGCACGTTCTCCCCGATTCCTTCGATTGCTTGACATCCCCCTGTTTGCCAGAGAATCCATGGCGGAAATTCCCTTTCTCAACATTCATAGCAATGCTTTCCGCTGTTATGACTCTAATGTTGGACTCGTTTTCAATGAGTCGCTACAATAAAAAGTTGATACAGGATCAAGAAGCCGCAGACGAGGAGGAGAAGAACGAGGATCGCAAGGAAATCAGTGACAATTTTGGGAAAGAAGAAGGAATAATCGAGAAAAAACTTGGTTCGCAATTGCTACGGTACCGTGTTGTTGCTCAGTTATTAGAAGCGGGGATCGTTGTGCATTCGGTGGTGATAGGGCTTTCAATGGGGGCTTCAGATAATCCGTGTACCATAAGACCGCTCATCGCTGCTCTGTGCTTTCATCAGCTGTTTGAAGGGATGGGGCTTGGAGGGTGCATTTTGCAGGCGGAATATAGGTTGAAGATGAAGGCGATAATGGTGTTTTTCTTCTCGGTTACAACGCCGTTTGGAATAGCATTGGGGATTGGGTTGTTGAATGTGTACAGTGAGAACAGTCCCACGGCTCTTATAGTTGTGGGAATTTTGAATGCTTTATCTGCTGGGTTGTTGAATTATATGGCATTGGTTGATTTGTTGGCGCATGATTTCATGGGGCCTAAATTGCAAGCCAATATCAAGCTGCAAATATGGGCTTATGTTGCTGTTTTGTTGGGCGTTGAACGTCTAGTGCTGATTGCTTCTACCGAAGCTGCTGTCCTCAACACCGTCTTCTTAATCTTCTCACACCATATCACAGCCTATCATCCTATCATGGCGACGCGGGAAGTTGTGGATCATGCCAGAAATTTTGCCATCATGGTCAGAGTCCAAGGCCCTGACCCGAAGGGCCTGAAGATGCAAAAACATGCATTCCATCAGTATCATTCTGGGAGGACAACTCTTTCAGCATCTGGGATGATATTACCTGAAACCCTTTATGACACTAGGGTCGCTAAGCATCTTGGTAATTATAAGGATCAATTTGCAACATTGGTCCTTACTGTTTCCTCCATTTTTGAGCCTTTTATGCCACTTCAACACAGAGATACTATTCATAAGGGAAAGCCTGAGCTAATTCCTGGTGTTCAGATTGACATTATGGTTGAGGGTAACTCATTGATGGAGAGAGATTCTGATGTTAACAAAACTCCTCATTGGCATGCTGCCCACTTGTTGGCTTTGTATGATATACCTACATCTGCCACTGCTCTTCAATCAGTCATGGATGCTTCCTTAGATTCATTACATCAGAGATGGGAGGTCGGCTGGTCTCTGGCCTCGTATACAAATGGTTCTCCATCTTTTAGGGATTCTCTTCGGGGACAGATTGAAAATGACAATAAAACTTTTGTTGGTAGCCAGAGAAATTTGGATATGGAAGGATCTAACAAGAATAATGACTTAACACTAAGAATCGCCATTCTTGGTGTTCCCTCATTCTCAAAGGACATGCCGAACATCAGTATATCTCCCTCAAGGCAGAGAGGATCCTTTCTTCTTGCTGTTGGTTCTCCTTTTGGTGTTCTATCACCATTGCATTTCCTTAACAGCATAATGGTCGGATCAATTTCCAATTGCTACCCTCCCAGCTCATGGAGCAAGTCATTGCTGATGGCTGACATGCGGTGTCTTCCTGGAATGGAAGGCTGTCCGGTTTTTGATGAACAAGGACGTCTCATCGGTGTTCTGATTAGGCCACTTGTGCATTATATGACTGGTGCTGAGATTCAGCTGTTGATTCCATGGGGAGCCATCGCAACTGCTTGCAATGGTCTACTGCTTGGGGCTTATAATGCTGGAGAAAGGATTGGCAACGACGGGTGTATTAGTGTTGTGGCGAATGAGGCAATGAATAAGGAACAAAATTTTCAGGGAGCCTTCAGCAGTATTCAAGAAAATTCTGGTTCTCGTTCATTCCCATTTAAAGTTGAGAAGGCAATGGCTTCTGTTTGTCTTGTTACAATTGGCGAAGGAATATGGGCATCTGGCGTTTTGCTCAATAGGCAAGGCCTAATACTCACGAATGCCCACTTGATAGAGCCATGGAGATTTGGGAAAACAAATGTTAGTGGAGAAAGATCAATTGAAAATGCCAAGCTGCTGCAGTCCCACACTCAACATTCTCCGTGTTCAATGCATAATGGTGTTTTTGGCGGCAAAAAGGGTGGAAATATAACAAAAAATGCCTCTAAGAATGCAAATCACGACCAACTTGAGGATAATAAGTCGAGTTTTGCTAACTATGGCCGTAGAAACTTGCGTGTTCGCTTGAATCATGCAGAGCCTTGGATTTGGTGTGATGCTAAAGTGTTATACATCTGCAAGGGACCTTGGGATGTTGCCCTGTTGCAGCTTGAGCAAGTTCCGGAGCAGCTCTCTCCTATTATCATGGATTGTTCATGGCCATCCTTGGGATCAAAGATACATGTTATTGGATATGGACTGTTGGGACCGAAATCTGGCTTCTCCCCATCTGTTAGCTCTGGTGTGGTGGCCAATGTGGTGAAAGCAAAGATTCCCTCATCCTATCACCAAGGAGATTCATTAAAATATTTTCCTGCGATGCTTGAAACAACCGCTGCAGTGCATCCTGGTGGTAGTGGGGGTGCTGTTGTCAATTCAGAAGGCCATATGATTGGACTTGTTACAAGCAATGCGAGGCATGGGCGAGGAGTTATTATTCCACACTTGAACTTCAGCATACCTTGTGCAGCTTTGGAACCCATTCATAGGTTCTCCAAAGACATGGAGGACCTCTCAGTGGTAAAAGTTCTGGATGAACCAGATGAGCAACTTTCTTCTATATGGGCATTGATGTCACAGCGATCTCCCAAGCCCTCTCCTCTGCCTGATCTGCCTCAATTGCTAGGTGAAGAGCATGAAACAAAAGGGAAAGGTTCTCGATTTGCAAAGTTCATCGCTGAACGGCGTGAAGTACTCCGAAAGCCAACTCTTCACGACGAGGGGGAAAGGCTTCCATCTGATATAATCCGTAGCAAGTTATGA 3357 45.25 MALNLRLHTLIFLLLLFSFCTPSFSDSIPSPNSQCEAQLQQGCHDRAKALKLKLIAIASILVASMIGVCLPLFSRAVPVLQPERKPFAIVKAFASGVILATGYMHVLPDSFDCLTSPCLPENPWRKFPFSTFIAMLSAVMTLMLDSFSMSRYNKKLIQDQEAADEEEKNEDRKEISDNFGKEEGIIEKKLGSQLLRYRVVAQLLEAGIVVHSVVIGLSMGASDNPCTIRPLIAALCFHQLFEGMGLGGCILQAEYRLKMKAIMVFFFSVTTPFGIALGIGLLNVYSENSPTALIVVGILNALSAGLLNYMALVDLLAHDFMGPKLQANIKLQIWAYVAVLLGVERLVLIASTEAAVLNTVFLIFSHHITAYHPIMATREVVDHARNFAIMVRVQGPDPKGLKMQKHAFHQYHSGRTTLSASGMILPETLYDTRVAKHLGNYKDQFATLVLTVSSIFEPFMPLQHRDTIHKGKPELIPGVQIDIMVEGNSLMERDSDVNKTPHWHAAHLLALYDIPTSATALQSVMDASLDSLHQRWEVGWSLASYTNGSPSFRDSLRGQIENDNKTFVGSQRNLDMEGSNKNNDLTLRIAILGVPSFSKDMPNISISPSRQRGSFLLAVGSPFGVLSPLHFLNSIMVGSISNCYPPSSWSKSLLMADMRCLPGMEGCPVFDEQGRLIGVLIRPLVHYMTGAEIQLLIPWGAIATACNGLLLGAYNAGERIGNDGCISVVANEAMNKEQNFQGAFSSIQENSGSRSFPFKVEKAMASVCLVTIGEGIWASGVLLNRQGLILTNAHLIEPWRFGKTNVSGERSIENAKLLQSHTQHSPCSMHNGVFGGKKGGNITKNASKNANHDQLEDNKSSFANYGRRNLRVRLNHAEPWIWCDAKVLYICKGPWDVALLQLEQVPEQLSPIIMDCSWPSLGSKIHVIGYGLLGPKSGFSPSVSSGVVANVVKAKIPSSYHQGDSLKYFPAMLETTAAVHPGGSGGAVVNSEGHMIGLVTSNARHGRGVIIPHLNFSIPCAALEPIHRFSKDMEDLSVVKVLDEPDEQLSSIWALMSQRSPKPSPLPDLPQLLGEEHETKGKGSRFAKFIAERREVLRKPTLHDEGERLPSDIIRSKL 1118
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 36810892 36820781 - CrPI670011_04g019270.1 Cre04g1927 496231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre04g1927 1118 FunFam Glyoxysomal processing protease glyoxysomal 918 1036 - -
Cre04g1927 1118 SUPERFAMILY Trypsin-like serine proteases 757 1023 IPR009003 -
Cre04g1927 1118 Coils Coil 149 169 - -
Cre04g1927 1118 NCBIfam ZIP zinc/iron transport family 35 350 IPR004698 GO:0005385(InterPro)|GO:0016020(InterPro)|GO:0071577(InterPro)
Cre04g1927 1118 Gene3D - 918 1035 IPR043504 -
Cre04g1927 1118 Gene3D - 745 917 IPR043504 -
Cre04g1927 1118 Pfam Trypsin-like peptidase domain 778 998 - -
Cre04g1927 1118 Pfam Trypsin-like peptidase domain 576 679 - -
Cre04g1927 1118 PANTHER SERINE PROTEASE-RELATED 375 1117 IPR039245 GO:0004252(InterPro)|GO:0004252(PANTHER)|GO:0005777(InterPro)|GO:0005777(PANTHER)|GO:0016485(PANTHER)|GO:0016485(InterPro)
Cre04g1927 1118 MobiDBLite consensus disorder prediction 1058 1083 - -
Cre04g1927 1118 Gene3D - 606 711 IPR043504 -
Cre04g1927 1118 SUPERFAMILY Trypsin-like serine proteases 581 703 IPR009003 -
Cre04g1927 1118 Pfam ZIP Zinc transporter 51 349 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre01g0826 Cre-Chr1:9540266 Cre04g1927 Cre-Chr4:36810892 3.60E-103 dispersed
Cre04g1927 Cre-Chr4:36810892 Cre11g2094 Cre-Chr11:32727640 1.20E-75 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre04g1927 K23012 - csv:101204270 1310.82