Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre04g1962 ATGAGAGCCGACCCATTTCTCGATCAAAGAGTTCGTTCCCATGTCGCTGATATAAGCACTTCGTTTGCGAAGATGGGTTCTGGTCGTTGGTTTAAGGCAGTAATTCGCTTAAAGAAAGTGAAAACCTGCAGTTCAAAACAAACTAAGGAGAAATTGGATGATTTGCAAAAAGATTCCCCAAGGTTTAAAAATGGTGGCACCAATGGGAATAGTAAGTCTCTTGGGATGCCAATTGAAGATGTAGCGGCAGTTCGGATTCAGACAGCATACCGAGCATATCGTGCCAGGAAAAATTTACGTCGCTTGAAAGGGGCCTTCAGACTGCAGAATCTGACTCAAGGCAATTCCGTTAGAAAGCATGCTACATCTACATTAGGCTATCTTCATTCATGGAGCAATATACAGGCTCAAATTAGGGCTCGTCGACTTTGTATGGTGACAGAAGGACGACTAAGACAAAAAAAATTAGAAAATCAACGAAAACTTGAGGCTAAGCTTCATCATATAGAGGTGGAGTGGTGTGGGGGTGCAGACTCCATGGATGGGATTCTTTCGAGGATACATGAGAGAGAAGAAGCGGCGGTTAAGCGCGAGCGTGCTATGGCATATGCATTCTCACATCAGTGGAGAGCAAACTCCAATGAGATGTATGGGTTGGGTAAAGATGAACTTGGTAAAGCTGATTGGGGTTGGAGCTGGAAAGAACGATGGATAGCTGCTCGTCCGTGGGAAAGCCGTGTGCCATCTCAGTTCGATAGTCCAAAGAAATCTACAATTAGGCAATCAAGCAAAGTCAGTAAGAGAAACTCGCCATCCCCTAAAGCACGAGTTTCAATTAAACCTCCTTCCCCAAATGTGAAATCAACTTCAAAGGCTCGAAGGTTGTCTTATCCAGCAACCGAGAAAACCGAAAAACTGGCTACAGAAGAAAAAGGCGTCAAAGAAAGCGTTAAAAACGAAGGGAACACTAAGAAAGAAGAAACAGCATCCTAA 993 43.91 MRADPFLDQRVRSHVADISTSFAKMGSGRWFKAVIRLKKVKTCSSKQTKEKLDDLQKDSPRFKNGGTNGNSKSLGMPIEDVAAVRIQTAYRAYRARKNLRRLKGAFRLQNLTQGNSVRKHATSTLGYLHSWSNIQAQIRARRLCMVTEGRLRQKKLENQRKLEAKLHHIEVEWCGGADSMDGILSRIHEREEAAVKRERAMAYAFSHQWRANSNEMYGLGKDELGKADWGWSWKERWIAARPWESRVPSQFDSPKKSTIRQSSKVSKRNSPSPKARVSIKPPSPNVKSTSKARRLSYPATEKTEKLATEEKGVKESVKNEGNTKKEETAS 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 37087747 37093379 + CrPI670011_04g019620.1 Cre04g1962 496266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre04g1962 330 MobiDBLite consensus disorder prediction 246 330 - -
Cre04g1962 330 MobiDBLite consensus disorder prediction 46 73 - -
Cre04g1962 330 MobiDBLite consensus disorder prediction 282 296 - -
Cre04g1962 330 PANTHER IQ-DOMAIN 5-RELATED 73 291 - -
Cre04g1962 330 MobiDBLite consensus disorder prediction 250 273 - -
Cre04g1962 330 MobiDBLite consensus disorder prediction 297 330 - -
Cre04g1962 330 ProSiteProfiles IQ motif profile. 79 107 - -
Cre04g1962 330 MobiDBLite consensus disorder prediction 46 60 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g1557 Cre-Chr3:30944266 Cre04g1962 Cre-Chr4:37087747 1.50E-32 dispersed
Cre04g1962 Cre-Chr4:37087747 Cre07g1360 Cre-Chr7:28500905 2.40E-53 dispersed
Cre04g1962 Cre-Chr4:37087747 Cre01g0429 Cre-Chr1:3658142 1.60E-33 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre04g1962 - - - 0.0