Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre04g2022 ATGGAGAAATCAAGTTTCTTTCTCCTTCTGCTGCTCCTCCTTCTCCTCCCTTTCATTCAACAAGCCTCTTCTTCCCACACTCACAAACAGGCTTACATTGTTTACTTTGGAGAACACCATGGAGATAAGAGTTGGGAAGAGATAGAAGCAATTCACCATTCATATTTGATGTCTGTTAAAGAGAGTGAAGAAGATGCAAAATCCTCTCTTCTGTACAATTACAAACACTCCATCAATGCCTTTGCTGCAATTCTTACTCCTCAACAAGCCTCCAAACTTTTAGAATTGGATGAAGTGGTGTCTGTGATAGAGAGTAAAAAGTATATGATGCACACAACAAGGTCATGGGAGTTTTCAGGGGTTGAAGAAGACAAACCCACCATTAATGACTTGGTTTCTAGAGCTAACTATGGAAAGGATGTTGTGATTGGAATGCTTGACAGTGGTGTGTGGCCAAAGTCCAAAAGCTTTAGTGACAAAGGGATGGGACCCATTCCAAAATCATGGAAGGGAATCTGCCAAACAGGACCTGCCTTTCAATCTGCTCATTGTAATAGGAAGATAATTGGAGCTCGATATTACCTAAAGGGATACGAGCATCACTTTGGCCGTTTAAATGAAACGGCGGACTACCGATCACCCTGCGACAAGGACGGCCACGGATCTCACACAGCCTCCATCGCCGGCGGCCGGAGGGTATACAATGTGTCGGGCTTTGGCGGCGTCGCTTGGGGCACGGCCTCTGGCGGCGCCCCATGGGCCCGGCTTGCAATTTACAAAGTTTGTTGGGCCATTCCCAACCAAATGAAAGCTCTGGGAAACGTTTGTTTCGACACCGACATGTTGGCTGCCATGGACGACGCCATTGCCGACGGCGTCGATGTTCTTAGCTTGTCCATCGGAAAATCGGAACCGTACAATTACACGGATGACGGAATCGCCATCGGAGCTCTGCACGCCGTTAAAAAAGACATCGTTGTGTCTTGTAGCGCTGGGAATTATGGGCCTACGCCGTCGGCGTTGTCTAATGTTGCGCCGTGGATCATAACCGTTGGAGCTAGCACTGTGGATCGGGAATTTTATTCTCCGGTCATTCTCGGTAATGGATTGAAGATTAAGGGATTGTCGGTGGCTCCTTCGAAGTTGAAGAGGACGAAGATGTATCCATTGGTGTATGCTGGAGATATAATGAAGCCTCATGTACCCCGTAACCAATCTGGGCTATGTGTGGCAGGCTCGCTTTCACACGAGAAAGCCAAAGGAAAGATAGTGCTGTGCTTTAGAGGAGAAGGAATCAGCCGATACGCCGGCAGCCTAGAAGTTAAAAGGTCAGGCGGCGCCGGAATGATACTTGGAAACGTGCCGGCGGTAGGACGGAGGCTGCACGCCGATCCCCATTTCGTTCCGGCCACCGCCGTCTCTTACGAAGATGCAAATATGATCCTTAAATATATAAAATCTCGCGCAAATCCAACTGCAACTATTGTTCCACCTGTCACTATCTACGGCTCCAGGCCGGCGCCGGCCATGGCCAACTTCTCAAGTAGAGGTCCAAACCCCGTCGACCCTCATTTTCTTAAGCCGGACATAACAGCTCCGGGGGTGGACATACTAGCAGCATGGTCCGAAGAAGATTCCCCAACTAAACTTCCAAAATCCTTGGACTCTCGTATTGTCCAATACAATCTCTACTCCGGCACCTCCATGTCCTGTCCCCACGTCTCCGCCGCCGCTGCCCTCCTCCGCGCCATCCACCCTACATGGTCCCAAGCCGCCATCCGCTCCGCCCTCATGACCACCGCCACCACCAACAACAAATCCGGCCACCCCATCACCGACGACGCCACCCCCGACAACTCCCCCGCCAACCCTTTCTCCTTTGGGTCCGGCCACTTCCGCCCCTCCAAGGCGGCGGACCCCGGCCTCGTCTACGACACCAATTACACTGACTATCTCCACTACCTGTGCGGCCTCAAAATGAACTCCATTGACCCTTCCTTCACGTGCCCTCCACGTGCCCTCCCACCCCACGACCTCAATTACCCTTCCATTGCCGTCCCTCAACTCAGAGGCACCGTGAGGATCAAAAGGACCGTCACCAACGTGGGCGGCGGAGGTAAAAGTGTGTACTTCTTTTACAGCGAGGCGCCGCCGGGTGTGGCGGTGAGTGCTTCTCCTAATATACTGTATTTCAATAGAGTTGGGGAGAGGAAAAGATTTACAATTTCAGTGAGCGGGAAAGTGAAAAATAGTAGTAGTAATGATAATAATAATAATAATGGGTACTCTTTTGGTTGGTTTGCTTGGAGTGATGGGATTCACTATGTTAGAAGCCCAATTGCAGTTTCTTCAACTTAA 2358 50.42 MEKSSFFLLLLLLLLLPFIQQASSSHTHKQAYIVYFGEHHGDKSWEEIEAIHHSYLMSVKESEEDAKSSLLYNYKHSINAFAAILTPQQASKLLELDEVVSVIESKKYMMHTTRSWEFSGVEEDKPTINDLVSRANYGKDVVIGMLDSGVWPKSKSFSDKGMGPIPKSWKGICQTGPAFQSAHCNRKIIGARYYLKGYEHHFGRLNETADYRSPCDKDGHGSHTASIAGGRRVYNVSGFGGVAWGTASGGAPWARLAIYKVCWAIPNQMKALGNVCFDTDMLAAMDDAIADGVDVLSLSIGKSEPYNYTDDGIAIGALHAVKKDIVVSCSAGNYGPTPSALSNVAPWIITVGASTVDREFYSPVILGNGLKIKGLSVAPSKLKRTKMYPLVYAGDIMKPHVPRNQSGLCVAGSLSHEKAKGKIVLCFRGEGISRYAGSLEVKRSGGAGMILGNVPAVGRRLHADPHFVPATAVSYEDANMILKYIKSRANPTATIVPPVTIYGSRPAPAMANFSSRGPNPVDPHFLKPDITAPGVDILAAWSEEDSPTKLPKSLDSRIVQYNLYSGTSMSCPHVSAAAALLRAIHPTWSQAAIRSALMTTATTNNKSGHPITDDATPDNSPANPFSFGSGHFRPSKAADPGLVYDTNYTDYLHYLCGLKMNSIDPSFTCPPRALPPHDLNYPSIAVPQLRGTVRIKRTVTNVGGGGKSVYFFYSEAPPGVAVSASPNILYFNRVGERKRFTISVSGKVKNSSSNDNNNNNGYSFGWFAWSDGIHYVRSPIAVSST 785
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 37515343 37523354 + CrPI670011_04g020220.1 Cre04g2022 496326

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cre04g2022 785 ProSiteProfiles Serine proteases, subtilase domain profile. 115 638 - -
Cre04g2022 785 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 780 IPR045051 -
Cre04g2022 785 Gene3D Peptidase S8/S53 domain 140 651 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cre04g2022 785 Pfam PA domain 388 480 IPR003137 -
Cre04g2022 785 Gene3D - 655 785 - -
Cre04g2022 785 SUPERFAMILY Subtilisin-like 111 642 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cre04g2022 785 Gene3D - 357 502 - -
Cre04g2022 785 Pfam Subtilase family 138 612 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cre04g2022 785 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 111 IPR037045 -
Cre04g2022 785 FunFam subtilisin-like protease SBT1.5 357 502 - -
Cre04g2022 785 Pfam Peptidase inhibitor I9 32 111 IPR010259 -
Cre04g2022 785 Pfam Fibronectin type-III domain 678 782 IPR041469 -
Cre04g2022 785 MobiDBLite consensus disorder prediction 603 626 - -
Cre04g2022 785 ProSitePatterns Serine proteases, subtilase family, serine active site. 566 576 IPR023828 -
Cre04g2022 785 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Cre04g2022 785 PRINTS Subtilisin serine protease family (S8) signature 565 581 IPR015500 -
Cre04g2022 785 PRINTS Subtilisin serine protease family (S8) signature 216 229 IPR015500 -
Cre04g2022 785 MobiDBLite consensus disorder prediction 603 631 - -
Cre04g2022 785 FunFam Subtilisin-like protease SBT1.5 140 382 - -
Cre04g2022 785 CDD Peptidases_S8_3 108 602 IPR034197 -
Cre04g2022 785 FunFam Subtilisin-like protease SBT5.3 20 111 - -
Cre04g2022 785 CDD PA_subtilisin_like 364 495 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre04g2022 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre04g2022 Cre-Chr4:37515343 Cre10g0638 Cre-Chr10:5970357 2.20E-169 dispersed
Cre04g2022 Cre-Chr4:37515343 Cre09g0097 Cre-Chr9:1216869 2.90E-161 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi10g300 . . . . . . Bma14g00928 . . . . . . . . . . Bhi03g00012 . . . Hepe04g1951 . . Cla01g02353 Cam01g2470 Cec04g2116 Cco04g2195 Clacu01g2489 Cmu01g2355 Cre04g2022 . . . . . Csa06g03738 . Cme08g00188 Blo08g00593 . . . . Bpe08g00737 Bma07g00806 . . . Cmo07g00148 . . . . Cpe19g01098 . . . . . . . . . . . . . . . . . Chy02g00195 .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cre07g1024 . 59 808 Subtilisin-like Serine Gene Family AT1G01900 56.5 3.4e-231 798.5
Cre07g1023 . 18 777 Subtilisin-like Serine Gene Family AT1G01900 54.3 6.4e-230 794.3
Cre07g0501 . 12 769 Subtilisin-like Serine Gene Family AT1G04110 67.4 8.0e-314 1072.8
Cre05g1717 . 3 762 Subtilisin-like Serine Gene Family AT1G20150 53.5 7.4e-226 780.8
Cre05g1717 . 6 505 Subtilisin-like Serine Gene Family AT1G20160 61.3 3.1e-170 595.5
Cre08g1005 . 207 664 Subtilisin-like Serine Gene Family AT1G20160 50.5 7.8e-121 431.4
Cre04g2154 . 9 832 Subtilisin-like Serine Gene Family AT1G30600 65.2 1.2e-309 1059.3
Cre07g1171 . 56 775 Subtilisin-like Serine Gene Family AT1G32940 54.8 2.5e-228 788.9
Cre07g1171 . 56 775 Subtilisin-like Serine Gene Family AT1G32950 54.5 4.9e-224 774.6
Cre07g1171 . 4 775 Subtilisin-like Serine Gene Family AT1G32960 53.4 1.2e-231 800.0
Cre01g0873 . 8 764 Subtilisin-like Serine Gene Family AT1G62340 58.7 1.9e-251 865.9
Cre02g0642 . 28 768 Subtilisin-like Serine Gene Family AT2G04160 63.7 2.5e-282 968.4
Cre10g0638 . 8 758 Subtilisin-like Serine Gene Family AT2G04160 57.5 1.2e-257 886.3
Cre10g0634 . 26 764 Subtilisin-like Serine Gene Family AT2G04160 58.0 2.8e-249 858.6
Cre10g0636 . 2 706 Subtilisin-like Serine Gene Family AT2G04160 57.3 7.8e-236 813.9
Cre10g0637 . 6 747 Subtilisin-like Serine Gene Family AT2G04160 53.9 3.3e-234 808.5
Cre10g0644 . 6 726 Subtilisin-like Serine Gene Family AT2G04160 55.4 4.0e-232 801.6
Cre01g1043 . 5 769 Subtilisin-like Serine Gene Family AT2G04160 53.3 2.0e-231 799.3
Cre10g0635 . 6 746 Subtilisin-like Serine Gene Family AT2G04160 54.0 9.9e-231 797.0
Cre10g0643 . 2 509 Subtilisin-like Serine Gene Family AT2G04160 51.6 8.3e-153 538.1
Cre03g1776 . 26 765 Subtilisin-like Serine Gene Family AT2G05920 73.5 0.0e+00 1100.1
Cre04g1357 . 22 761 Subtilisin-like Serine Gene Family AT2G05920 55.7 3.9e-232 801.6
Cre09g0097 . 30 760 Subtilisin-like Serine Gene Family AT2G05920 53.6 3.3e-215 745.3
Cre05g0942 . 27 771 Subtilisin-like Serine Gene Family AT2G05920 51.9 6.3e-214 741.1
Cre08g1580 . 38 755 Subtilisin-like Serine Gene Family AT2G05920 54.0 1.6e-209 726.5
Cre02g1497 . 31 764 Subtilisin-like Serine Gene Family AT2G05920 51.5 2.0e-207 719.5
Cre09g0122 . 28 781 Subtilisin-like Serine Gene Family AT2G05920 51.3 2.5e-202 702.6
Cre11g1608 . 34 835 Subtilisin-like Serine Gene Family AT2G19170 81.8 0.0e+00 1338.6
Cre09g0097 . 8 767 Subtilisin-like Serine Gene Family AT3G14067 63.7 5.6e-282 967.2
Cre04g1357 . 9 761 Subtilisin-like Serine Gene Family AT3G14067 54.1 1.4e-224 776.5
Cre03g1776 . 25 763 Subtilisin-like Serine Gene Family AT3G14067 54.1 1.6e-220 763.1
Cre09g0122 . 9 787 Subtilisin-like Serine Gene Family AT3G14067 50.1 8.0e-204 707.6
Cre09g0122 . 31 789 Subtilisin-like Serine Gene Family AT3G14240 77.2 0.0e+00 1209.9
Cre02g1497 . 32 772 Subtilisin-like Serine Gene Family AT3G14240 58.8 6.4e-246 847.4
Cre04g1357 . 27 757 Subtilisin-like Serine Gene Family AT3G14240 52.4 4.8e-217 751.5
Cre09g0097 . 29 758 Subtilisin-like Serine Gene Family AT3G14240 51.7 7.2e-213 737.6
Cre03g1776 . 29 759 Subtilisin-like Serine Gene Family AT3G14240 51.1 9.7e-210 727.2
Cre07g0720 . 8 704 Subtilisin-like Serine Gene Family AT3G46840 50.1 7.6e-180 627.9
Cre07g1029 . 12 570 Subtilisin-like Serine Gene Family AT4G00230 60.8 2.7e-196 682.2
Cre07g1031 . 9 566 Subtilisin-like Serine Gene Family AT4G00230 58.8 2.8e-188 655.6
Cre07g1171 . 56 773 Subtilisin-like Serine Gene Family AT4G10510 53.2 7.9e-222 767.3
Cre07g1171 . 33 773 Subtilisin-like Serine Gene Family AT4G10520 54.8 1.8e-229 792.7
Cre07g1171 . 33 773 Subtilisin-like Serine Gene Family AT4G10530 52.5 7.9e-217 750.7
Cre07g1171 . 32 775 Subtilisin-like Serine Gene Family AT4G10540 54.2 4.3e-234 808.1
Cre07g1171 . 56 775 Subtilisin-like Serine Gene Family AT4G10550 53.4 1.0e-221 766.9
Cre04g2154 . 15 832 Subtilisin-like Serine Gene Family AT4G20430 68.5 0.0e+00 1132.9
Cre03g0807 . 1 273 Subtilisin-like Serine Gene Family AT4G21320 78.5 2.9e-127 451.8
Cre07g1171 . 28 772 Subtilisin-like Serine Gene Family AT4G21650 50.4 2.4e-205 712.6
Cre01g1144 . 62 791 Subtilisin-like Serine Gene Family AT4G26330 55.3 2.4e-234 808.9
Cre11g1608 . 29 835 Subtilisin-like Serine Gene Family AT4G30020 81.5 0.0e+00 1334.3
Cre02g1497 . 25 772 Subtilisin-like Serine Gene Family AT4G34980 74.9 0.0e+00 1149.4
Cre09g0122 . 16 789 Subtilisin-like Serine Gene Family AT4G34980 53.1 2.9e-230 795.4
Cre04g1357 . 1 757 Subtilisin-like Serine Gene Family AT4G34980 51.2 3.9e-211 731.9
Cre05g0942 . 9 770 Subtilisin-like Serine Gene Family AT4G34980 50.9 2.1e-209 726.1
Cre03g1776 . 25 759 Subtilisin-like Serine Gene Family AT4G34980 50.7 1.7e-206 716.5
Cre04g1084 . 4 564 Subtilisin-like Serine Gene Family AT5G03620 58.1 6.8e-184 641.0
Cre07g1031 . 5 566 Subtilisin-like Serine Gene Family AT5G03620 51.5 3.3e-146 515.8
Cre07g1029 . 28 568 Subtilisin-like Serine Gene Family AT5G03620 52.1 3.7e-145 512.3
Cre07g0720 . 8 536 Subtilisin-like Serine Gene Family AT5G03620 52.1 1.1e-144 510.8
Cre06g1670 . 291 1050 Subtilisin-like Serine Gene Family AT5G19660 80.0 0.0e+00 1272.7
Cre04g2154 . 34 612 Subtilisin-like Serine Gene Family AT5G44530 70.8 8.2e-244 840.1
Cre04g2022 . 77 783 Subtilisin-like Serine Gene Family AT5G45640 52.7 6.8e-200 694.5
Cre04g2022 . 23 783 Subtilisin-like Serine Gene Family AT5G45650 57.9 7.5e-250 860.5
Cre05g0942 . 27 769 Subtilisin-like Serine Gene Family AT5G51750 73.4 0.0e+00 1150.6
Cre04g1357 . 13 761 Subtilisin-like Serine Gene Family AT5G51750 52.3 3.8e-230 795.0
Cre03g1776 . 24 763 Subtilisin-like Serine Gene Family AT5G51750 51.3 5.2e-219 758.1
Cre08g1580 . 16 755 Subtilisin-like Serine Gene Family AT5G51750 50.6 1.6e-212 736.5
Cre05g2357 . 37 734 Subtilisin-like Serine Gene Family AT5G59190 50.8 1.8e-191 666.4
Cre07g0720 . 27 702 Subtilisin-like Serine Gene Family AT5G59190 50.1 1.4e-180 630.2
Cre10g0638 . 760 1502 Subtilisin-like Serine Gene Family AT5G59810 62.1 4.4e-263 904.4
Cre01g1043 . 13 770 Subtilisin-like Serine Gene Family AT5G59810 59.5 7.1e-261 897.1
Cre02g0642 . 11 768 Subtilisin-like Serine Gene Family AT5G59810 58.7 6.0e-260 894.0
Cre10g0634 . 1 764 Subtilisin-like Serine Gene Family AT5G59810 55.3 5.7e-234 807.7
Cre10g0635 . 4 746 Subtilisin-like Serine Gene Family AT5G59810 55.9 9.7e-234 807.0
Cre10g0636 . 1 706 Subtilisin-like Serine Gene Family AT5G59810 55.7 3.7e-225 778.5
Cre10g0644 . 19 726 Subtilisin-like Serine Gene Family AT5G59810 55.0 6.3e-225 777.7
Cre10g0637 . 4 749 Subtilisin-like Serine Gene Family AT5G59810 53.5 1.1e-221 766.9
Cre10g0643 . 2 513 Subtilisin-like Serine Gene Family AT5G59810 51.5 1.4e-144 510.8
Cre04g1357 . 8 762 Subtilisin-like Serine Gene Family AT5G67360 72.4 0.0e+00 1105.1
Cre08g1580 . 14 756 Subtilisin-like Serine Gene Family AT5G67360 62.8 1.5e-276 949.1
Cre03g1776 . 27 764 Subtilisin-like Serine Gene Family AT5G67360 56.2 5.2e-232 801.2
Cre09g0097 . 8 759 Subtilisin-like Serine Gene Family AT5G67360 56.1 6.3e-230 794.3
Cre05g0942 . 11 768 Subtilisin-like Serine Gene Family AT5G67360 53.8 7.7e-228 787.3
Cre02g1497 . 12 767 Subtilisin-like Serine Gene Family AT5G67360 51.4 1.5e-210 729.9
Cre09g0122 . 9 784 Subtilisin-like Serine Gene Family AT5G67360 51.6 1.9e-210 729.6
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004225 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3 1 1 1 4 1 1 1 1 1 2 1 2 37