Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre04g2022 ATGGAGAAATCAAGTTTCTTTCTCCTTCTGCTGCTCCTCCTTCTCCTCCCTTTCATTCAACAAGCCTCTTCTTCCCACACTCACAAACAGGCTTACATTGTTTACTTTGGAGAACACCATGGAGATAAGAGTTGGGAAGAGATAGAAGCAATTCACCATTCATATTTGATGTCTGTTAAAGAGAGTGAAGAAGATGCAAAATCCTCTCTTCTGTACAATTACAAACACTCCATCAATGCCTTTGCTGCAATTCTTACTCCTCAACAAGCCTCCAAACTTTTAGAATTGGATGAAGTGGTGTCTGTGATAGAGAGTAAAAAGTATATGATGCACACAACAAGGTCATGGGAGTTTTCAGGGGTTGAAGAAGACAAACCCACCATTAATGACTTGGTTTCTAGAGCTAACTATGGAAAGGATGTTGTGATTGGAATGCTTGACAGTGGTGTGTGGCCAAAGTCCAAAAGCTTTAGTGACAAAGGGATGGGACCCATTCCAAAATCATGGAAGGGAATCTGCCAAACAGGACCTGCCTTTCAATCTGCTCATTGTAATAGGAAGATAATTGGAGCTCGATATTACCTAAAGGGATACGAGCATCACTTTGGCCGTTTAAATGAAACGGCGGACTACCGATCACCCTGCGACAAGGACGGCCACGGATCTCACACAGCCTCCATCGCCGGCGGCCGGAGGGTATACAATGTGTCGGGCTTTGGCGGCGTCGCTTGGGGCACGGCCTCTGGCGGCGCCCCATGGGCCCGGCTTGCAATTTACAAAGTTTGTTGGGCCATTCCCAACCAAATGAAAGCTCTGGGAAACGTTTGTTTCGACACCGACATGTTGGCTGCCATGGACGACGCCATTGCCGACGGCGTCGATGTTCTTAGCTTGTCCATCGGAAAATCGGAACCGTACAATTACACGGATGACGGAATCGCCATCGGAGCTCTGCACGCCGTTAAAAAAGACATCGTTGTGTCTTGTAGCGCTGGGAATTATGGGCCTACGCCGTCGGCGTTGTCTAATGTTGCGCCGTGGATCATAACCGTTGGAGCTAGCACTGTGGATCGGGAATTTTATTCTCCGGTCATTCTCGGTAATGGATTGAAGATTAAGGGATTGTCGGTGGCTCCTTCGAAGTTGAAGAGGACGAAGATGTATCCATTGGTGTATGCTGGAGATATAATGAAGCCTCATGTACCCCGTAACCAATCTGGGCTATGTGTGGCAGGCTCGCTTTCACACGAGAAAGCCAAAGGAAAGATAGTGCTGTGCTTTAGAGGAGAAGGAATCAGCCGATACGCCGGCAGCCTAGAAGTTAAAAGGTCAGGCGGCGCCGGAATGATACTTGGAAACGTGCCGGCGGTAGGACGGAGGCTGCACGCCGATCCCCATTTCGTTCCGGCCACCGCCGTCTCTTACGAAGATGCAAATATGATCCTTAAATATATAAAATCTCGCGCAAATCCAACTGCAACTATTGTTCCACCTGTCACTATCTACGGCTCCAGGCCGGCGCCGGCCATGGCCAACTTCTCAAGTAGAGGTCCAAACCCCGTCGACCCTCATTTTCTTAAGCCGGACATAACAGCTCCGGGGGTGGACATACTAGCAGCATGGTCCGAAGAAGATTCCCCAACTAAACTTCCAAAATCCTTGGACTCTCGTATTGTCCAATACAATCTCTACTCCGGCACCTCCATGTCCTGTCCCCACGTCTCCGCCGCCGCTGCCCTCCTCCGCGCCATCCACCCTACATGGTCCCAAGCCGCCATCCGCTCCGCCCTCATGACCACCGCCACCACCAACAACAAATCCGGCCACCCCATCACCGACGACGCCACCCCCGACAACTCCCCCGCCAACCCTTTCTCCTTTGGGTCCGGCCACTTCCGCCCCTCCAAGGCGGCGGACCCCGGCCTCGTCTACGACACCAATTACACTGACTATCTCCACTACCTGTGCGGCCTCAAAATGAACTCCATTGACCCTTCCTTCACGTGCCCTCCACGTGCCCTCCCACCCCACGACCTCAATTACCCTTCCATTGCCGTCCCTCAACTCAGAGGCACCGTGAGGATCAAAAGGACCGTCACCAACGTGGGCGGCGGAGGTAAAAGTGTGTACTTCTTTTACAGCGAGGCGCCGCCGGGTGTGGCGGTGAGTGCTTCTCCTAATATACTGTATTTCAATAGAGTTGGGGAGAGGAAAAGATTTACAATTTCAGTGAGCGGGAAAGTGAAAAATAGTAGTAGTAATGATAATAATAATAATAATGGGTACTCTTTTGGTTGGTTTGCTTGGAGTGATGGGATTCACTATGTTAGAAGCCCAATTGCAGTTTCTTCAACTTAA 2358 50.42 MEKSSFFLLLLLLLLLPFIQQASSSHTHKQAYIVYFGEHHGDKSWEEIEAIHHSYLMSVKESEEDAKSSLLYNYKHSINAFAAILTPQQASKLLELDEVVSVIESKKYMMHTTRSWEFSGVEEDKPTINDLVSRANYGKDVVIGMLDSGVWPKSKSFSDKGMGPIPKSWKGICQTGPAFQSAHCNRKIIGARYYLKGYEHHFGRLNETADYRSPCDKDGHGSHTASIAGGRRVYNVSGFGGVAWGTASGGAPWARLAIYKVCWAIPNQMKALGNVCFDTDMLAAMDDAIADGVDVLSLSIGKSEPYNYTDDGIAIGALHAVKKDIVVSCSAGNYGPTPSALSNVAPWIITVGASTVDREFYSPVILGNGLKIKGLSVAPSKLKRTKMYPLVYAGDIMKPHVPRNQSGLCVAGSLSHEKAKGKIVLCFRGEGISRYAGSLEVKRSGGAGMILGNVPAVGRRLHADPHFVPATAVSYEDANMILKYIKSRANPTATIVPPVTIYGSRPAPAMANFSSRGPNPVDPHFLKPDITAPGVDILAAWSEEDSPTKLPKSLDSRIVQYNLYSGTSMSCPHVSAAAALLRAIHPTWSQAAIRSALMTTATTNNKSGHPITDDATPDNSPANPFSFGSGHFRPSKAADPGLVYDTNYTDYLHYLCGLKMNSIDPSFTCPPRALPPHDLNYPSIAVPQLRGTVRIKRTVTNVGGGGKSVYFFYSEAPPGVAVSASPNILYFNRVGERKRFTISVSGKVKNSSSNDNNNNNGYSFGWFAWSDGIHYVRSPIAVSST 785
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 37515343 37523354 + CrPI670011_04g020220.1 Cre04g2022 496326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre04g2022 785 ProSiteProfiles Serine proteases, subtilase domain profile. 115 638 - -
Cre04g2022 785 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 780 IPR045051 -
Cre04g2022 785 Gene3D Peptidase S8/S53 domain 140 651 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cre04g2022 785 Pfam PA domain 388 480 IPR003137 -
Cre04g2022 785 Gene3D - 655 785 - -
Cre04g2022 785 SUPERFAMILY Subtilisin-like 111 642 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cre04g2022 785 Gene3D - 357 502 - -
Cre04g2022 785 Pfam Subtilase family 138 612 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cre04g2022 785 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 111 IPR037045 -
Cre04g2022 785 FunFam subtilisin-like protease SBT1.5 357 502 - -
Cre04g2022 785 Pfam Peptidase inhibitor I9 32 111 IPR010259 -
Cre04g2022 785 Pfam Fibronectin type-III domain 678 782 IPR041469 -
Cre04g2022 785 MobiDBLite consensus disorder prediction 603 626 - -
Cre04g2022 785 ProSitePatterns Serine proteases, subtilase family, serine active site. 566 576 IPR023828 -
Cre04g2022 785 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Cre04g2022 785 PRINTS Subtilisin serine protease family (S8) signature 565 581 IPR015500 -
Cre04g2022 785 PRINTS Subtilisin serine protease family (S8) signature 216 229 IPR015500 -
Cre04g2022 785 MobiDBLite consensus disorder prediction 603 631 - -
Cre04g2022 785 FunFam Subtilisin-like protease SBT1.5 140 382 - -
Cre04g2022 785 CDD Peptidases_S8_3 108 602 IPR034197 -
Cre04g2022 785 FunFam Subtilisin-like protease SBT5.3 20 111 - -
Cre04g2022 785 CDD PA_subtilisin_like 364 495 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre04g2022 Cre-Chr4:37515343 Cre10g0638 Cre-Chr10:5970357 2.20E-169 dispersed
Cre04g2022 Cre-Chr4:37515343 Cre09g0097 Cre-Chr9:1216869 2.90E-161 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre04g2022 - - - 0.0