Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre04g2045 | ATGTCAGATGAAATGTTTAAAGATCTTTTTTATGGCGGGATGGATGAGTACGAGTCTCTAGTGAGAGCTTTTGGGGAATCATCGGATTATTCGAATAATAATAATGAAATTTCGGGGACTCCCATAAATTCTTGTGGATCTTTGTCGTCTTCGGATGCTGGAGCTGAGGAGGATGATTCTGTGAAAGAGAAGGATAAGCAGATCGACAAAGAACATGTTGAAGATGGAGGAGAGAGTTCTAAGGCTGGATCAGGTAAATCAAAGAAGAAAGGAGAGAAGAAAGAGAGAGAAGCAAGAGTTGCTTTCATGACGAAGAGCGAGGTTGATCATCTTGAGGATGGATATAGATGGAGAAAATATGGACAGAAGGCTGTTAAGAACAGTGCTTATCCTAGGAGCTATTACAGATGCACAACTCAAAAATGCGGAGTAAAAAAACGAGTAGAGAGATCCTTTGAAGATCCATCCATTGTAATTACAACCTACGAAGGTCAACACAACCACCCAGTCCCGACAACGCTAAGAGGAAACCTATCGGCGGCGAGCAGCGCGTTCTCACCATCCATGCTAGCACCAATGCCAGTGGTCGGTGGCATTGGGTTTCTACCTACAGAGTTGTTGAGTAATTCTTCCAGCAACAATAACCAGGCCATCAATGGTGGCGCATCCGTTTATTCACATAACAACTTTGACTACACTTATAGTGAGCGACAATCAGAATATGGGCTTTTGCAGGATATTTTTCCAACTCCTTCATCGTTCTTCAACCGGCAATTGTGA | 780 | 42.95 | MSDEMFKDLFYGGMDEYESLVRAFGESSDYSNNNNEISGTPINSCGSLSSSDAGAEEDDSVKEKDKQIDKEHVEDGGESSKAGSGKSKKKGEKKEREARVAFMTKSEVDHLEDGYRWRKYGQKAVKNSAYPRSYYRCTTQKCGVKKRVERSFEDPSIVITTYEGQHNHPVPTTLRGNLSAASSAFSPSMLAPMPVVGGIGFLPTELLSNSSSNNNQAINGGASVYSHNNFDYTYSERQSEYGLLQDIFPTPSSFFNRQL | 259 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 37696344 | 37697930 | + | CrPI670011_04g020450.1 | Cre04g2045 | 496349 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre04g2045 | 259 | FunFam | WRKY transcription factor 57 | 97 | 171 | - | - | |
Cre04g2045 | 259 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 55 | 209 | IPR044810 | GO:0003700(InterPro) | |
Cre04g2045 | 259 | SMART | WRKY_cls | 111 | 170 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cre04g2045 | 259 | MobiDBLite | consensus disorder prediction | 27 | 98 | - | - | |
Cre04g2045 | 259 | Gene3D | WRKY domain | 95 | 172 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cre04g2045 | 259 | ProSiteProfiles | WRKY domain profile. | 106 | 171 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cre04g2045 | 259 | SUPERFAMILY | WRKY DNA-binding domain | 103 | 171 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cre04g2045 | 259 | MobiDBLite | consensus disorder prediction | 27 | 54 | - | - | |
Cre04g2045 | 259 | Pfam | WRKY DNA -binding domain | 112 | 169 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cre04g2045 | 259 | MobiDBLite | consensus disorder prediction | 55 | 98 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre01g0235 | Cre-Chr1:1736481 | Cre04g2045 | Cre-Chr4:37696344 | 5.50E-41 | dispersed | |
Cre04g2045 | Cre-Chr4:37696344 | Cre06g1206 | Cre-Chr6:5917369 | 3.90E-38 | dispersed | |
Cre10g1308 | Cre-Chr10:26373199 | Cre04g2045 | Cre-Chr4:37696344 | 4.20E-14 | dispersed | |
Cre11g1198 | Cre-Chr11:9855583 | Cre04g2045 | Cre-Chr4:37696344 | 4.30E-21 | transposed | |
Cre02g2148 | Cre-Chr2:35073683 | Cre04g2045 | Cre-Chr4:37696344 | 7.40E-36 | wgd | |
Cre04g2045 | Cre-Chr4:37696344 | Cre09g0909 | Cre-Chr9:9133848 | 1.30E-11 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
53551 | PF03106 | WRKY | 8.00E-26 | CL0274 | Cre | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre04g2045 | - | - | - | 0.0 |