Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre04g2154 ATGGATATTATTTACTGTGCACGTCTACTATGTGGTGTTGTCTGTTTTGGGATGTTTCTATGCGCATCTTGTCTTGACGAATTCGGTGATTCAACAGCTGTTTACATTGTAACTCTCAAGGAACCTCCTTCCACTACTCATTACTATGGTCAGCTTAGACAAAATACCACTTCTTTTAGGCTTAATACTTCTGGTGGATTAAGCATCCACAAACCAAGAAACATATCGAGAAAGCATCGAAGATATAGATCTTACATAGCCCGAGTTCATGATTCATTGTTGAAGAAGGTCTTGAAGGGGGAAAAATATCTAAAGCTGTACAGTTACCATTTCTTGATCAATGGATTTGCTGTGCTTGTTACCGAAGAACAGGCAAGTAAACTTTCAAAGAGGATAGAGGTGGCAAATGTTGTCATGGATTTCTCTGTTAGAACTGCTACGACCCACACTCCACAGTTCTTGGGCCTACCGCAGGGAGCTTGGTCTCAAGATGGTGGCTTTGAGTCTGCTGGAGCTGGGATTGTGATAGGGTTCATTGACACTGGCATTGATCCTTCGCACCCCAGCTTTGCTGATGATTTGACTGATAATCCGTTTCCCATTCCGGCTCACTTCTCTGGAATCTGTGAGGTAACTCCAGATTTTCCATCTGGATCTTGCAATCGGAAGCTTGTGGGAGCACGCCATTTTGCAGCATCAGCTATAACAAGGGGAATATTTAATGCATCTCAGGATTATGCATCGCCATTTGATGGTGATGGACATGGCACGCACACAGCTTCAATTGCTGCTGGAAACCATGGCATTCCAGTCATAGTTGCTGGACATCACTTTGGAAATGCCAGTGGGATGGCTCCTCGTTCACACATTGCTGTTTACAAGGCACTGTACAAAAGTTTTGGAGGTTTTGCTGCTGATGTTGTTGCTGCAGTTGATCAGGCTGCTCAGGATGGAGTGGATATAATAAGTTTATCAATCACACCGAATCGGCGTCCCCCTGGTATTGCAACATTTTTTAATCCCATAGATATGGCACTGCTCTCTGCTGTAAAGGCTGGTATATTCGTTGTGCAAGCAGCTGGCAATACTGGACCAGCACCAAAGAGCATGTCTTCCTTCAGTCCATGGATCTTTACTGTTGGTGCTGCTTCTCACGATAGAAGCTATGCTAACTCTATACACCTTGGCAATAATGTCACCATCCCGGGGGTTGGTCTTGCACCTGGAACCTATAATGACACAAAGTACAAACTAGTTGCTGCAATACATGCACTGAACAATGACACAAACGTGTCAGAGGACATGTATGTGGGCGAATGCCAAGACTCCAGTAACTTTGATCAGGATCTGGTCCAAGGGAACCTTCTAATATGCAGCTACTCAATCAGATTTGTGCTAGGGCTTTCGACGGTTAAACAGGCTTTACAGACGGCAAAAAACTTGAGTGCTGCTGGTGTCATTTTCTATATGGATTCTTTTGTGATAGGTTTTAGGCTCAACCCAATTCCAATGAAAATGCCTGGCATCATAATTTCATCACCAGAAGATTCCAAGATGCTTCTTCAATACTACAATTCTTCTTTGGAAGTAGATGGATTAACAAAGAAAATTTCTAAATTTGGAGCTGTTGCCAGCATATGTGGAGGATTGAAGGCAAATTATAGCTCTTCTGCCCCACAAATTATGTACTACTCTGCTAGAGGACCAGATCCAGAAGACAGTTCTCTTGATGATTCTGATATTATGAAGCCTAACTTGGTAGCTCCTGGAAATTCCATATGGGCTGCTTGGAGCTCTGTTGCCACTGACTCTATTGAATTTCTCGGTGAAAACTTTGCAATGATGTCGGGAACGAGCATGGCTGCTCCTCATATTGCAGGCCTCGCCTCACTCATAAAGCAGAAGTATCCTAGTCTTAGTCCTTCAGCCATTGCATCTGCACTATCGACAACAGCTTCTCTTTACAACAAGACTGGTGGACCGATCATGGCGCAGCGTGCTTATGCTAACCCTGAACAGAACCAGTCTCCAGCTACGCCTTTCGATATGGGAAGTGGTTTTGTGAATGCAACAGCAGCTCTCAACCCAGGGTTGATATTTGATTCTAGTTACGATGATTATATGTCTTTTCTTTGTGGTATCAACGGATCATCTCCTGTGGTCTTCAACTACACAGGCCAGAACTGTGGGCTATACAATTCGAGCATCACTGGAGCTGATTTGAACTTGCCCTCTGTGACGATAGCAAAACTTAACCAGTCGAGAGTAGTGCAACGAACCGTGACCAACATTGCTGGACCTGAGTTTTATAGTGTTGGTTGGAGTGCTCCTTATGGGATTTCTTTGAAGGTTTCTCCAACTCGATTTACAATCGGCAGTGGCGAGAAACAAGAGCTAACCATATTCTTCAACTCCACGATGAACAGCTCGGTTGCTAGCTTTGGTAGGATTGGACTTTTTGGGAGTGCAGGCCATATAATCAACATTCCTCTTTCGAAAGTAGGATATGGGCTGGAAGAACAAGAGAATGCTTTTCATTATGAGAATTACAGGAGTATCATTACTAAAGAAGAGGCTTTCCCCTTTATGGTTCTCTACTCAAAGCTCGTTCACTCAATGATTCGGTACAGAAATCACACAAGTAATACAGTACAGACCCTCAATTCTTCAGGTCCACAATATACATCGCATTCACAGGGTAAAAGTTCTCTGAACCTCAAATTGAAGTTGACTCAAGAATGA 2742 43.51 MDIIYCARLLCGVVCFGMFLCASCLDEFGDSTAVYIVTLKEPPSTTHYYGQLRQNTTSFRLNTSGGLSIHKPRNISRKHRRYRSYIARVHDSLLKKVLKGEKYLKLYSYHFLINGFAVLVTEEQASKLSKRIEVANVVMDFSVRTATTHTPQFLGLPQGAWSQDGGFESAGAGIVIGFIDTGIDPSHPSFADDLTDNPFPIPAHFSGICEVTPDFPSGSCNRKLVGARHFAASAITRGIFNASQDYASPFDGDGHGTHTASIAAGNHGIPVIVAGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAVDQAAQDGVDIISLSITPNRRPPGIATFFNPIDMALLSAVKAGIFVVQAAGNTGPAPKSMSSFSPWIFTVGAASHDRSYANSIHLGNNVTIPGVGLAPGTYNDTKYKLVAAIHALNNDTNVSEDMYVGECQDSSNFDQDLVQGNLLICSYSIRFVLGLSTVKQALQTAKNLSAAGVIFYMDSFVIGFRLNPIPMKMPGIIISSPEDSKMLLQYYNSSLEVDGLTKKISKFGAVASICGGLKANYSSSAPQIMYYSARGPDPEDSSLDDSDIMKPNLVAPGNSIWAAWSSVATDSIEFLGENFAMMSGTSMAAPHIAGLASLIKQKYPSLSPSAIASALSTTASLYNKTGGPIMAQRAYANPEQNQSPATPFDMGSGFVNATAALNPGLIFDSSYDDYMSFLCGINGSSPVVFNYTGQNCGLYNSSITGADLNLPSVTIAKLNQSRVVQRTVTNIAGPEFYSVGWSAPYGISLKVSPTRFTIGSGEKQELTIFFNSTMNSSVASFGRIGLFGSAGHIINIPLSKVGYGLEEQENAFHYENYRSIITKEEAFPFMVLYSKLVHSMIRYRNHTSNTVQTLNSSGPQYTSHSQGKSSLNLKLKLTQE 913
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 38671285 38678553 + CrPI670011_04g021540.1 Cre04g2154 496458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre04g2154 913 Gene3D Peptidase S8/S53 domain 173 707 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cre04g2154 913 CDD PA_subtilisin_like 392 527 - -
Cre04g2154 913 CDD Peptidases_S8_3 146 653 IPR034197 -
Cre04g2154 913 Pfam Fibronectin type-III domain 740 831 IPR041469 -
Cre04g2154 913 Pfam Subtilase family 171 666 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cre04g2154 913 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 176 187 IPR023827 -
Cre04g2154 913 Pfam Peptidase inhibitor I9 34 145 IPR010259 -
Cre04g2154 913 SUPERFAMILY Subtilisin-like 146 698 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cre04g2154 913 Gene3D - 711 834 - -
Cre04g2154 913 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 144 IPR037045 -
Cre04g2154 913 FunFam Subtilisin-like protease SBT1.5 173 397 - -
Cre04g2154 913 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 94 799 IPR045051 -
Cre04g2154 913 ProSitePatterns Serine proteases, subtilase family, serine active site. 617 627 IPR023828 -
Cre04g2154 913 PRINTS Subtilisin serine protease family (S8) signature 616 632 IPR015500 -
Cre04g2154 913 PRINTS Subtilisin serine protease family (S8) signature 171 190 IPR015500 -
Cre04g2154 913 PRINTS Subtilisin serine protease family (S8) signature 251 264 IPR015500 -
Cre04g2154 913 Gene3D - 386 554 - -
Cre04g2154 913 ProSiteProfiles Serine proteases, subtilase domain profile. 151 694 - -
Cre04g2154 913 MobiDBLite consensus disorder prediction 887 913 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre04g2154 Cre-Chr4:38671285 Cre11g1608 Cre-Chr11:26792491 5.30E-191 dispersed
Cre04g2154 Cre-Chr4:38671285 Cre05g0942 Cre-Chr5:8604731 1.00E-85 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre04g2154 - - - 0.0