Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre05g0071 | ATGAAGAGGATTCCAGAGTCAAAAGCACTTCCATTATTACTGCCCATAGAGATGCTTCCAGAATCAAATGTACTTCCGGGAAAATTTTGTGTTTTGGATGATATACCAAAAGCACATGTGGCCTCAGCCAAGCAAGCTGGCCACTGGTCGAACATGCACTCAGCTAAGGTACGAGACGTGGGAAGATCAATTGGACAAGGATTTCAAGATTCAGAAGTTTCTGCACCTATACGGACGTCAAAGGGGAAATCCTCTTTTTTGGGGCAGGAAGAAGCTAAGCGTGATGTCACTTTAAAGGGCAGTAGCTCTTTGATTGAGGAAGGTGGTCCAAGTTCCTTCTCTGGGGCTAGCCACCCGCCAGAGCCTGTGGATATGGATCTAATGAGAACTGTTTATGTACCCATAGGGCAAAATAAACCTGATCCCGGCTGCTTGATGAAGAGCTTTTCCGTTAAGGGCCCTTTTCTTGAGGATCTTTCAATTAGGGTTCCAGCCAAGAAACCAAGCCCTGCTGTTCTCTCCCCTACAGAAAGCTTAGTTGACGAGCCGCATGACTTGGGTGTTTTATCTTCCCCTTTTTCAATTCCTCGTGCATCACAAAATACAGAAACCTCTCTACTTCCCCCAGATTCTGAGGAGAAGGAATGTGTTTGGGATGCTTCTTTGCCCCCAAGTGGCAATGTAAGTCCACTCAGTAGCATTGACAGTAGTGGAGTTGTCACAGCTATGAGCATTGTTAATAGTTGTGCTAGCACATATCGAAGTGATGGAATGGTTAGTATTGAAAGGAACTGTGAGAGTACAAAAGGAAGCATTAGAGGGGACTCTCTCGAGAGTGCAAAAACAAGTATTAGTCGAGCTAGTGATAGCAGTGGTCTCAGCGATGATAGTAGTTGGAGTAACATCACAGGAAGTGCTAATAAGCCTCACAAAGGAAACGATCCTAGGTGGAAAGCCATTCTTGCTATTCGAGCAAGAGATGGAATATTAGGCATGAGCCATTTTAGACTGCTGAAAAGACTTGGATGTGGCGATATTGGTAGTGTTTATCTCTCAGAGCTAAGTGGGACGCGCTGTTATTTTGCAATGAAAGTAATGGACAAGGCATCGCTTGCTATAAGGAAGAAGTTAACGAGAGCTCAGACAGAAAGGGAGATCTTGCAGTTACTTGACCATCCATTTCTGCCGACTTTGTACACCCATTTTGAGACTGACAGATTTTCCTGTCTAGTAATGGAATATTGTCCAGGGGGAGACCTGCACACTTTGAGGCAACGGCAACCAGGGAAACACTTCTCTGAGTATGCTGCAAGGTTCTATGCTGCAGAGGTTTTACTGGCCCTCGAATATCTCCACATGCTTGGAGTTGTCTATAGGGACTTGAAACCGGAGAATGTACTGGTTCGTGATGACGGCCACATAATGCTCTCAGATTTCGACCTTTCACTAAGATGTGCAGTGTCACCCACCCTGATAAAAACCTCATACGATTCTGACCCATCAAAACGAGCTGCATTCTGTGTCCAGCCTGCCTGTATTGAGCCATCATCAGTTTGCATCCAACCAGCATGTTTTATTCCTCGACTCTTCCCTCAGAAAAGCAAAAAGAAAAGTCCCAAGCCTCGAAGTGATCTGGGCTTGCAATCCAGTGCTCTTCCCGAGCTGGTAGCAGAGCCTACTGCTGCCCGATCCATGTCTTTTGTTGGCACCCATGAATACCTAGCCCCTGAAATCATCAAAGGAGAGGGTCATGGAAGTGCTGTTGATTGGTGGACTTTTGGCATTTTCTTGCATGAACTATTGTATGGAAAAACCCCGTTCAAGGGATCCGGAAACAGAGCCACACTATTCAATGTAGTAGGGCAGCAACTGAAGTTCCCGGAGTCTCCGGCAACTAGTTATGCTAGCCGAGATCTTATTCGAGGTTTGCTAGTAAAGGAGCCACAGCATCGGCTCGGAGTGAAGAGGGGAGCAACGGAGATCAAGCAGCATCCTTTCTTTGAAGGTGTGAATTGGGCTTTGATACGATGCAGCACGCCCCCAGAAGTGCCAAGACCAATGGAGGCGGAACTGCCTAAGTTTGGGGTAGTTGACACAACAGGGGTTGGGAGCAGCAGTAAGAGGATGGTAGGTACAGATGTTGTTAAGTCTGGTGGTCAATATCTTGACTTCGAGTTCTTTTAA | 2184 | 46.29 | MKRIPESKALPLLLPIEMLPESNVLPGKFCVLDDIPKAHVASAKQAGHWSNMHSAKVRDVGRSIGQGFQDSEVSAPIRTSKGKSSFLGQEEAKRDVTLKGSSSLIEEGGPSSFSGASHPPEPVDMDLMRTVYVPIGQNKPDPGCLMKSFSVKGPFLEDLSIRVPAKKPSPAVLSPTESLVDEPHDLGVLSSPFSIPRASQNTETSLLPPDSEEKECVWDASLPPSGNVSPLSSIDSSGVVTAMSIVNSCASTYRSDGMVSIERNCESTKGSIRGDSLESAKTSISRASDSSGLSDDSSWSNITGSANKPHKGNDPRWKAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSGTRCYFAMKVMDKASLAIRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSYDSDPSKRAAFCVQPACIEPSSVCIQPACFIPRLFPQKSKKKSPKPRSDLGLQSSALPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLKFPESPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPMEAELPKFGVVDTTGVGSSSKRMVGTDVVKSGGQYLDFEFF | 727 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 906286 | 910796 | - | CrPI670011_05g000710.1 | Cre05g0071 | 496584 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre05g0071 | 727 | MobiDBLite | consensus disorder prediction | 269 | 308 | - | - | |
Cre05g0071 | 727 | Gene3D | Transferase(Phosphotransferase) domain 1 | 419 | 490 | - | - | |
Cre05g0071 | 727 | ProSiteProfiles | Protein kinase domain profile. | 335 | 667 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre05g0071 | 727 | MobiDBLite | consensus disorder prediction | 68 | 86 | - | - | |
Cre05g0071 | 727 | Pfam | Protein kinase domain | 564 | 667 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre05g0071 | 727 | Pfam | Protein kinase domain | 336 | 486 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre05g0071 | 727 | MobiDBLite | consensus disorder prediction | 191 | 214 | - | - | |
Cre05g0071 | 727 | FunFam | serine/threonine-protein kinase D6PK-like | 562 | 685 | - | - | |
Cre05g0071 | 727 | MobiDBLite | consensus disorder prediction | 193 | 207 | - | - | |
Cre05g0071 | 727 | FunFam | Serine/threonine-protein kinase D6PK-like | 333 | 418 | - | - | |
Cre05g0071 | 727 | Gene3D | Phosphorylase Kinase; domain 1 | 333 | 418 | - | - | |
Cre05g0071 | 727 | PANTHER | FLIPPASE KINASE 1-RELATED | 211 | 688 | - | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
Cre05g0071 | 727 | MobiDBLite | consensus disorder prediction | 68 | 120 | - | - | |
Cre05g0071 | 727 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 456 | 468 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre05g0071 | 727 | MobiDBLite | consensus disorder prediction | 269 | 312 | - | - | |
Cre05g0071 | 727 | SUPERFAMILY | Protein kinase-like (PK-like) | 317 | 691 | IPR011009 | - | |
Cre05g0071 | 727 | CDD | STKc_phototropin_like | 333 | 686 | - | - | |
Cre05g0071 | 727 | SMART | serkin_6 | 335 | 667 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre05g0071 | 727 | FunFam | serine/threonine-protein kinase D6PK-like | 419 | 486 | - | - | |
Cre05g0071 | 727 | Gene3D | Transferase(Phosphotransferase) domain 1 | 562 | 684 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre02g2508 | Cre-Chr2:38353164 | Cre05g0071 | Cre-Chr5:906286 | 1.80E-148 | dispersed | |
Cre02g2510 | Cre-Chr2:38371670 | Cre05g0071 | Cre-Chr5:906286 | 3.10E-114 | dispersed | |
Cre05g0071 | Cre-Chr5:906286 | Cre10g1529 | Cre-Chr10:29217918 | 1.00E-181 | dispersed | |
Cre05g0071 | Cre-Chr5:906286 | Cre01g1029 | Cre-Chr1:16858212 | 1.00E-189 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
64101 | PF00069 | Pkinase | 5.30E-36 | CL0016 | Cre | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre05g0071 | - | - | - | 0.0 |