Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre05g0133 ATGGTTGTATTCATATTGGGAGAAATCCAGATCAATCTCCTTCCTGCTTCATTCGTCATCCCTCTTTTATTCACAATCCTGATTCGATTTTCATTTCCCTTTTCGTCTTTTTGCCCCATTCCGGATCCGAAGCAATTTCTCCAGGATTCAGGGGAATTTGCTTATGGTATGGAAACAGGGCCTGCCACTTCTAACCATTCATCGTCATTGCCCTTTGTTATGGAATGCCGATTTCGCTTGCAATCGGCATTCGATTCTTTTTGCATTGCGTCCGAAGCCTTTTCCGAGCATCGTCGTTGTCGAATTCCGATCTGGCGACATGCTTTTTCTAGCAAAAATGAGTGCCTAGCTGATCCCATTAGTGCGTTATTTGGAAGTATGGAGTCTCCTGATACTGCTGCTGAGAAAGATCCTACCGGTCGTTACGTTCGGTACGATGAAATCCTGGGAAGGGGCGCTTTCAAGACAGTTTACAAGGCATTCGACGAAGTGGATGGAATTGAAGTCGCCTGGAACCAAGTTAGGATTGATGGTTTCTTGCAGTCACCTGAGGATTTAGAAAAGTTGTACTCCGAAGTACATCTACTTAAATCATTAAAACATGAGAATATTATCAAGTTCTACAATTCTTGGGTGGATGATAAGAAGAAAACAGTCAACATGATCACTGAGCTCTTCACATCTGGGAGTTTGAGGCAATACCGTAAAAAGCATAAAAATGTTGATATGAAGGCCATAAAGAACTGGGCGCGACAGGTTCTTCGAGGGTTGGTCTATCTTCACAGTCATGATCCCCCCATTATTCATAGAGATTTGAAAGGTGATAACATTTTTATTAATGGAAATCATGGAGAAGTTAAGATTGGAGATCTTGGACTAGCGATCGTTATGCAGCAGCCTACTGCTCGAAGTGTAATTGGAACTCCTGAGTTCATGGCTCCTGAGCTTTATGAAGAGGAGTACAATGAGCTTGTTGATGTATATTCTTTTGGGATGTGCATGCTGGAGATGGTTACCTTTGAGTATCCATATAATGAATGTAAAAATCCAGCTCAGATCTTTAGGAAGGTTACATCTGGTATTAAGCCTGCTTCCCTTGCTAAGGTGAGTGATCCACAGACTATGGAGTTCATCAATAAATGTTTGGTTCCAGCGCATGAGAGGTTGTCTGCAAAAGAGCTTCTTAAAGATTCATTCCTTCAAGTTGAGAACCCAAAGGAATCAGCGCGCAATCCCCTACAGCTACCTATCCAGGTTCCTAAATCAATGAATTTGCCAAAGAGTGGACCTATCTCCATGGACATTGACATTGACCACAAACAACATTCTTTAAGCACTTATGCTGAAAGCAATAGTGGGAGTCCACACTTTCCAGTCGTGGAGTTCCAGACAATGAATAAAAACAACGAGTTCAGGTTACGTGGAAATAAGAATGATGAAAACTCCGTGGCATTAACCTTGCGTATTGCAGACTCAAATGGTCGAGTGAGGAATATACATTTTACATTTTATCTCGATTCTGATACTGCACTATCAGTAGCAGCTGAAATGGCTGAACAATTGGAGTTGATAAATCATGATGTGGATTTCATAGCTGAATTTATTGATTTTTTGATAACAAAGCTTATACCTGGTTGGAAGCCCTTGTCTGTTAATTCCTCAAATGGAGAATCGAGTCTCTGCGGCGGTCCCCCCATCCTCAAAAGTGTGAAATCATCTATTGGATCTCCATGGGGTTCAATGTCAACTGGGATTCATGATGGGTTGGTCGAACAAGACATTTCCTCTGTGTTAGTGTGTAGTACTCAAAAGGATTGTCTGCAATCTGAGCGAGATGGCTGGGCTGACGATATTCCCAGTAGTCACATTTTTGATACTTGCCCTTCTTCTCCCAGTTTGGCTAATTTTGAGGACTTGAATTCACACGCTTCATTTGCGTCAGAGTTACTGGTCGAAGATTGCTCTACCAAAAGTTCTAAGGTGTTTGATTGTTCCAATATTGATGGAAGTTCAAAAGGCTCGAGCTGGTCGATTGGGGAACTAGAGCCCCACGGTTCATCATATGTTGAAGAAAAATTGCAAAGAAATGTTAGTGATGTTGGAATCATCACTCCCATGGATTATTTTGTGAAGAACTCGGTGGTGTCATTGCCTGCTCCAAGTGAAGCATCTAATGTGATGAGCTTGACAAGCAGTTGTTCTTCGTTATCGTTTGCGGACAAGGATCTCGATGCTGAACTCAAGATGGAAATCAATGCTATCGAGACACATTATCGGCAACTGTATGACGAGCTATCACGAATGAGAGAGGAGGCACTAGAGGCCACCAGAAAGAGATGGATTGCAAAGAAGAAACTGATTCATTGA 2367 42.08 MVVFILGEIQINLLPASFVIPLLFTILIRFSFPFSSFCPIPDPKQFLQDSGEFAYGMETGPATSNHSSSLPFVMECRFRLQSAFDSFCIASEAFSEHRRCRIPIWRHAFSSKNECLADPISALFGSMESPDTAAEKDPTGRYVRYDEILGRGAFKTVYKAFDEVDGIEVAWNQVRIDGFLQSPEDLEKLYSEVHLLKSLKHENIIKFYNSWVDDKKKTVNMITELFTSGSLRQYRKKHKNVDMKAIKNWARQVLRGLVYLHSHDPPIIHRDLKGDNIFINGNHGEVKIGDLGLAIVMQQPTARSVIGTPEFMAPELYEEEYNELVDVYSFGMCMLEMVTFEYPYNECKNPAQIFRKVTSGIKPASLAKVSDPQTMEFINKCLVPAHERLSAKELLKDSFLQVENPKESARNPLQLPIQVPKSMNLPKSGPISMDIDIDHKQHSLSTYAESNSGSPHFPVVEFQTMNKNNEFRLRGNKNDENSVALTLRIADSNGRVRNIHFTFYLDSDTALSVAAEMAEQLELINHDVDFIAEFIDFLITKLIPGWKPLSVNSSNGESSLCGGPPILKSVKSSIGSPWGSMSTGIHDGLVEQDISSVLVCSTQKDCLQSERDGWADDIPSSHIFDTCPSSPSLANFEDLNSHASFASELLVEDCSTKSSKVFDCSNIDGSSKGSSWSIGELEPHGSSYVEEKLQRNVSDVGIITPMDYFVKNSVVSLPAPSEASNVMSLTSSCSSLSFADKDLDAELKMEINAIETHYRQLYDELSRMREEALEATRKRWIAKKKLIH 788
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1469645 1473633 - CrPI670011_05g001330.1 Cre05g0133 496646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre05g0133 788 Gene3D - 481 552 - -
Cre05g0133 788 Pfam Protein kinase domain 146 400 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre05g0133 788 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 129 774 IPR050588 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER)
Cre05g0133 788 SMART serkin_6 143 400 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre05g0133 788 Gene3D Phosphorylase Kinase; domain 1 126 224 - -
Cre05g0133 788 ProSitePatterns Serine/Threonine protein kinases active-site signature. 267 279 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre05g0133 788 CDD STKc_WNK 141 400 - -
Cre05g0133 788 FunFam Probable serine/threonine-protein kinase WNK1 128 224 - -
Cre05g0133 788 Coils Coil 751 778 - -
Cre05g0133 788 FunFam probable serine/threonine-protein kinase WNK9 226 405 - -
Cre05g0133 788 SUPERFAMILY Protein kinase-like (PK-like) 145 445 IPR011009 -
Cre05g0133 788 Gene3D Transferase(Phosphotransferase) domain 1 226 405 - -
Cre05g0133 788 ProSiteProfiles Protein kinase domain profile. 143 400 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g0610 Cre-Chr3:5021396 Cre05g0133 Cre-Chr5:1469645 1.50E-137 dispersed
Cre05g0133 Cre-Chr5:1469645 Cre09g2350 Cre-Chr9:42767772 4.60E-175 dispersed
Cre05g0133 Cre-Chr5:1469645 Cre02g1958 Cre-Chr2:32971515 2.10E-127 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64103 PF00069 Pkinase 6.00E-53 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre05g0133 K08867 - csv:101204101 1208.36