Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre05g0223 | ATGTCACAAACAGATGATTTCGAGACGTTCACTCCAACGACTGATGTTGAGCCTCTAAAGAGGGCCTGGTGTAATGAGAAGGCTGCTCCTGAGATTCTACCCTTTGAGGGATCTTTGGTTGGGAGAATCAAAGAGCAGATTCGGTCAATGGAAGAGACTATAGAGGAATATTCAAGAAGTGGTATCGATCCCCTAATTGTATCACTCTATCAAATGGATTTAGATAGGACACAGTTCTTGTTGAGATCGTATGTTAGGAGTCGTTTGCAGAAGATTGAGAAGTACATGCTCTATATCTTGAAGTCAGATGAACTTTTCAGACGTCTTTCCAAAGAAGAGATAACGTTTACTGATAGGTGTCGTCATGATATGAAAAAACATTTTGATGAGAGTGTTCTATCAAAATTGCCAAATAATTATCAGGACATTTTGAGGCAATCTATAACAAGTGAAGAGGATGACATGGTTCCAGAACCTCCACTGGACACATTTGTGGTCTGCAAAAGTAAGGAATATCTTGAACATATACAGCTTGAGGATGAGGAAGAGAGGGCATCCAGTAGAATAGAGGAACCTTTTGAGATGGAGGCCAATCTTTCGACATGGGTGATGGAGACTATTTCATTGGCTGCTTGGATGCTAATTTCAACATTGGATGAGCTCATAAATGAAAGGAATGATAGAGCATTGAAGGCATTGGCAAAGGCTGGTGAGCCATTTCAATCTGATATTTCATGA | 738 | 40.24 | MSQTDDFETFTPTTDVEPLKRAWCNEKAAPEILPFEGSLVGRIKEQIRSMEETIEEYSRSGIDPLIVSLYQMDLDRTQFLLRSYVRSRLQKIEKYMLYILKSDELFRRLSKEEITFTDRCRHDMKKHFDESVLSKLPNNYQDILRQSITSEEDDMVPEPPLDTFVVCKSKEYLEHIQLEDEEERASSRIEEPFEMEANLSTWVMETISLAAWMLISTLDELINERNDRALKALAKAGEPFQSDIS | 245 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 2143066 | 2146379 | - | CrPI670011_05g002230.1 | Cre05g0223 | 496736 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre05g0223 | 245 | PANTHER | SLD5 PROTEIN | 4 | 204 | IPR008591 | GO:0000727(PANTHER)|GO:0000811(PANTHER)|GO:0006261(InterPro) | |
Cre05g0223 | 245 | Coils | Coil | 40 | 60 | - | - | |
Cre05g0223 | 245 | SUPERFAMILY | GINS helical bundle-like | 11 | 145 | IPR036224 | - | |
Cre05g0223 | 245 | FunFam | DNA replication complex GINS protein SLD5 | 1 | 202 | - | - | |
Cre05g0223 | 245 | Pfam | GINS complex protein helical bundle domain | 67 | 129 | IPR021151 | - | |
Cre05g0223 | 245 | CDD | GINS_A_Sld5 | 15 | 133 | IPR038749 | - | |
Cre05g0223 | 245 | Gene3D | - | 2 | 205 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre05g0223 | K10735 | - | csv:101210888 | 371.703 |