Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre05g0223 ATGTCACAAACAGATGATTTCGAGACGTTCACTCCAACGACTGATGTTGAGCCTCTAAAGAGGGCCTGGTGTAATGAGAAGGCTGCTCCTGAGATTCTACCCTTTGAGGGATCTTTGGTTGGGAGAATCAAAGAGCAGATTCGGTCAATGGAAGAGACTATAGAGGAATATTCAAGAAGTGGTATCGATCCCCTAATTGTATCACTCTATCAAATGGATTTAGATAGGACACAGTTCTTGTTGAGATCGTATGTTAGGAGTCGTTTGCAGAAGATTGAGAAGTACATGCTCTATATCTTGAAGTCAGATGAACTTTTCAGACGTCTTTCCAAAGAAGAGATAACGTTTACTGATAGGTGTCGTCATGATATGAAAAAACATTTTGATGAGAGTGTTCTATCAAAATTGCCAAATAATTATCAGGACATTTTGAGGCAATCTATAACAAGTGAAGAGGATGACATGGTTCCAGAACCTCCACTGGACACATTTGTGGTCTGCAAAAGTAAGGAATATCTTGAACATATACAGCTTGAGGATGAGGAAGAGAGGGCATCCAGTAGAATAGAGGAACCTTTTGAGATGGAGGCCAATCTTTCGACATGGGTGATGGAGACTATTTCATTGGCTGCTTGGATGCTAATTTCAACATTGGATGAGCTCATAAATGAAAGGAATGATAGAGCATTGAAGGCATTGGCAAAGGCTGGTGAGCCATTTCAATCTGATATTTCATGA 738 40.24 MSQTDDFETFTPTTDVEPLKRAWCNEKAAPEILPFEGSLVGRIKEQIRSMEETIEEYSRSGIDPLIVSLYQMDLDRTQFLLRSYVRSRLQKIEKYMLYILKSDELFRRLSKEEITFTDRCRHDMKKHFDESVLSKLPNNYQDILRQSITSEEDDMVPEPPLDTFVVCKSKEYLEHIQLEDEEERASSRIEEPFEMEANLSTWVMETISLAAWMLISTLDELINERNDRALKALAKAGEPFQSDIS 245
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2143066 2146379 - CrPI670011_05g002230.1 Cre05g0223 496736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre05g0223 245 PANTHER SLD5 PROTEIN 4 204 IPR008591 GO:0000727(PANTHER)|GO:0000811(PANTHER)|GO:0006261(InterPro)
Cre05g0223 245 Coils Coil 40 60 - -
Cre05g0223 245 SUPERFAMILY GINS helical bundle-like 11 145 IPR036224 -
Cre05g0223 245 FunFam DNA replication complex GINS protein SLD5 1 202 - -
Cre05g0223 245 Pfam GINS complex protein helical bundle domain 67 129 IPR021151 -
Cre05g0223 245 CDD GINS_A_Sld5 15 133 IPR038749 -
Cre05g0223 245 Gene3D - 2 205 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre05g0223 K10735 - csv:101210888 371.703