Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre05g0288 | ATGAATGTCTCAGTAATTTTTTTGATTCTAGCTGGAAAGCTGAGGAAGAAGAAGTATCATCCAATTGCAGGCACTGTATTTCACCAGCTCCTCAATTTCCACCGGTTGCAAGATTACATGACTGATCTTGCTCGAAAGCATAAAACATACAGGCTTCTTGGGCCCTTCAGGAATGAGGTTTATACTTCTGACCCACCAAATGTTGAGTATATACTCAGAACCAACTTCGAGAATTTTGGCAAGGGGTCACATAACTACAGAATTCTCAGGGATCTTCTTGGCGATGGAATTTTCACAGTTGATGGAGAGAAGTGGCGTCAGCAGAGAAAGATTTCAAGCTATGAGTTCTCTACAAAAGTTCTGAGGGACTACAGCAGTGTCATCTTCCGGAAAACTGCTGTTAAACTAGCTAACATCGTGTCCGAAGCTGCTATTTTGAATCGAGTAATTGATATTCAAGATCTGTTTATGAAAACAACTCTGGATTCAATATTTCATGTCTCATTTGGAATTGATCTAGATAGCTTGCATGGATCAAATGAAGAAATGAACAAGTTTTGCTCTGCTTTTGAAGCATCAAGTACAATGACACTCTGGCGATACGTTGATGTAATCTGGCCAATCAAGAAGGCTCTGAACATTGGGTCCGAAGCTATCTTAAAAGAGAACATGAAAATTGTTGATGAGTACATATATAAGCTCATTAGTAGCGCACTCGAACAGAGAGAAAAGTTAGGCGACAACGCTTTGATGAAAAGAGAGAATATAGTGTCGAGGTTTTTGCAAGCGGAAACGTCCGATCCAAAGTATCTAAGAGATATTATTCTTAATTTTGTAATAGCTGGAAAAGACACAACGGCAGTTACCCTTGCTTGGTTCATTTACATGCTTTGCAAGCATCCTGCAGTGCAGGAAAGAGTTGCTAGAGAGATCAAGGAAGTGACAAACGTTGAAGATGTTACCAATTTTGCGGAGTTTGCTGCAAGATTGACTGAAGAATCTCTAGAGAAGATGCAGTTTCTTACTGCGGCTATCAATGAAACGCTTAGACTCTATCCTGCTGTTCCAGTGGATGCAAAGATTTGCTTTTCTGACGATACACTTCCGGATGGATTCAGTGTGAGGAAAGGAGATATGGTGTCGTACCAGCCATATGCAATGGGTAGGATGAAATTCATATGGGGTGATGATGCCGAGGAATTCCGACCAGAGAGATGGTTTGATGGAGATGGAAATCTCCAGCCTCAGAGCCCTTTCAAATTTACAGCCTTTCAGGCAGGGCCACGAATTTGTCTGGGAAAAGAGTTTGCTTACAGGCAGATAAAAATCATCTCAGCTCTATTATTGAGCTGTTTTAAATTCAAAATGAGTGATGAGAAGAAAATTGTGCAGTATCAACCAATGATCAATCTTCTCATAAAAGGAGGCCTTCAAGTTTGTGCCATTCCTAGACGTCCTATGCCCTAA | 1467 | 40.76 | MNVSVIFLILAGKLRKKKYHPIAGTVFHQLLNFHRLQDYMTDLARKHKTYRLLGPFRNEVYTSDPPNVEYILRTNFENFGKGSHNYRILRDLLGDGIFTVDGEKWRQQRKISSYEFSTKVLRDYSSVIFRKTAVKLANIVSEAAILNRVIDIQDLFMKTTLDSIFHVSFGIDLDSLHGSNEEMNKFCSAFEASSTMTLWRYVDVIWPIKKALNIGSEAILKENMKIVDEYIYKLISSALEQREKLGDNALMKRENIVSRFLQAETSDPKYLRDIILNFVIAGKDTTAVTLAWFIYMLCKHPAVQERVAREIKEVTNVEDVTNFAEFAARLTEESLEKMQFLTAAINETLRLYPAVPVDAKICFSDDTLPDGFSVRKGDMVSYQPYAMGRMKFIWGDDAEEFRPERWFDGDGNLQPQSPFKFTAFQAGPRICLGKEFAYRQIKIISALLLSCFKFKMSDEKKIVQYQPMINLLIKGGLQVCAIPRRPMP | 488 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 2635501 | 2643244 | + | CrPI670011_05g002880.1 | Cre05g0288 | 496801 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre05g0288 | 488 | PRINTS | E-class P450 group I signature | 342 | 360 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g0288 | 488 | PRINTS | E-class P450 group I signature | 421 | 431 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g0288 | 488 | PRINTS | E-class P450 group I signature | 270 | 287 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g0288 | 488 | PRINTS | E-class P450 group I signature | 290 | 316 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g0288 | 488 | PRINTS | E-class P450 group I signature | 431 | 454 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g0288 | 488 | CDD | CYP86A | 48 | 477 | - | - | |
| Cre05g0288 | 488 | SUPERFAMILY | Cytochrome P450 | 18 | 484 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g0288 | 488 | PRINTS | P450 superfamily signature | 343 | 354 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g0288 | 488 | PRINTS | P450 superfamily signature | 422 | 431 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g0288 | 488 | PRINTS | P450 superfamily signature | 431 | 442 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g0288 | 488 | PRINTS | P450 superfamily signature | 281 | 298 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g0288 | 488 | PANTHER | CYTOCHROME P450 | 11 | 477 | - | - | |
| Cre05g0288 | 488 | Gene3D | Cytochrome P450 | 13 | 485 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g0288 | 488 | Pfam | Cytochrome P450 | 20 | 472 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre05g0288 | Cre-Chr5:2635501 | Cre10g1764 | Cre-Chr10:32039833 | 1.30E-90 | dispersed | |
| Cre05g0288 | Cre-Chr5:2635501 | Cre05g0291 | Cre-Chr5:2695439 | 7.40E-139 | proximal | |
| Cre11g1350 | Cre-Chr11:14678281 | Cre05g0288 | Cre-Chr5:2635501 | 1.70E-105 | transposed | |
| Cre11g0766 | Cre-Chr11:4859582 | Cre05g0288 | Cre-Chr5:2635501 | 1.20E-22 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre05g0288 | - | - | - | 0.0 |