Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre05g0352 | ATGGAGGTGAGTTGGGCTGTGGCGGCGGTAGCTGCAGCAGCGGCAGTGTTTGCGGCGGTGAAATGGGCGGCGAAGAGTTTGAATGAGTGGATATATGAGGCGAAATTAGGTGATCGGCGGATGGCTCTGCCGCCGGGGGATTTGGGATGGCCTATAATTGGAAATATGTTGGGTTTTCTTAGAGCTTTCAAGTCCAAGAACCCTGAAACCTTCATTGATAGCTATGTTTCCAGGTTTGGGAAAATAGGAGTGTACAAGGTTCATTTGTTTGGAAACCCTAGCGTGGTCGTGACGACGCCGGAGACATGCCGGAAAGTTCTTACAGACGACGAGGCCTTTCAGCCCGGTTGGCCACGCGCGGCCGTAGAGCTCATCGGAAAGAAGTCCTTCATCGAAATGCCGGTCGAGGAACACAAGCGCCTTCGCCGCTTAACCTCTGCTCCGGTGAACGGTTTCGAGGCTTTGAGCAATTACATTCCTTACATCGAAGAGAATGTATTGAAATCGTTGGATAAATGGTCCAATATGGGGCCAATCGAATTCTTAACTCAACTTCGTAAGCTCACATTCACCATTATCATGTACATTTTCCTTAGCGCGGAGAGCGAATCGGTAATGGAGGCGTTAGAGAAGGAGTACACTCGGCTGAACTACGGTGTTCGAGCCCTGAGAATTAACATACCTGGATTTGCTTACCACAGAGCACTCAAGGCTCGGAAGAATCTTGTGGCTGCGTTGCAAGCAATTGTTACTGATCGAAGAAAACGAAGATTGGACAAATGGGCGCCGATGAGGAAGGACATGATGGACGCTCTGATTGATGTTGAAGATGAAAATGGCAGAAAATTGACTGATGAGGAGATCATTGATATCCTAGTGATGTACTTGAATGCTGGTCATGAATCTTCAGGCCATACCATGATGTGGGCAACTATTTTGTTGAATCAACACCCAGAAGTTCTCAAGAAAGCTAAGGCAGAGCAGGAGAAGATTGTGAGGAGGAGACCTCCAGGTCAAAAGGGATTGACTTTGAAAGAATGCAGGGAAATGGAATATCTCTCAAAAGTGGTCGACGAGACTCTTCGCTATGTGTCATTCTCCCTTGTTGTCTTCAGAGAAGCACAGATGGATGTCAATCTTAATGGCTATCTAATTCCCAAGGGTTGGAAAGTCCTGGCTTGGTTCAGAAGCATTCACTATGACAGTGAAGTTTACCCAGACCCAAAGAAATTTGATCCTTCAAGATGGGATGGATTTATCCCAAAAGCAGGTGAGTTTCTTCCATTTGGAGCAGGAAGCAGGCTGTGCCCAGGAAATGATCTAGCCAAATTGGAGATCTGCATTTTCATTCACTATTTTCTCCTCAATTACAAGCTTGAATGGCTGACCCCTGATTGTCCAATCTTGTATCTGCCCCATTCAAGGCCAAAGGACAATTGCTTGGCTAAAATCAGTAAGAATTCCAGCACTGTTGTGTAA | 1479 | 46.52 | MEVSWAVAAVAAAAAVFAAVKWAAKSLNEWIYEAKLGDRRMALPPGDLGWPIIGNMLGFLRAFKSKNPETFIDSYVSRFGKIGVYKVHLFGNPSVVVTTPETCRKVLTDDEAFQPGWPRAAVELIGKKSFIEMPVEEHKRLRRLTSAPVNGFEALSNYIPYIEENVLKSLDKWSNMGPIEFLTQLRKLTFTIIMYIFLSAESESVMEALEKEYTRLNYGVRALRINIPGFAYHRALKARKNLVAALQAIVTDRRKRRLDKWAPMRKDMMDALIDVEDENGRKLTDEEIIDILVMYLNAGHESSGHTMMWATILLNQHPEVLKKAKAEQEKIVRRRPPGQKGLTLKECREMEYLSKVVDETLRYVSFSLVVFREAQMDVNLNGYLIPKGWKVLAWFRSIHYDSEVYPDPKKFDPSRWDGFIPKAGEFLPFGAGSRLCPGNDLAKLEICIFIHYFLLNYKLEWLTPDCPILYLPHSRPKDNCLAKISKNSSTVV | 492 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 3208308 | 3214944 | - | CrPI670011_05g003520.1 | Cre05g0352 | 496865 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre05g0352 | 492 | FunFam | Ent-kaurenoic acid oxidase | 34 | 487 | - | - | |
| Cre05g0352 | 492 | PRINTS | P450 superfamily signature | 427 | 436 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g0352 | 492 | PRINTS | P450 superfamily signature | 298 | 315 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g0352 | 492 | PRINTS | P450 superfamily signature | 355 | 366 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g0352 | 492 | PRINTS | P450 superfamily signature | 436 | 447 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g0352 | 492 | Gene3D | Cytochrome P450 | 34 | 487 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g0352 | 492 | PANTHER | CYTOCHROME P450 26 | 42 | 464 | - | GO:0004497(PANTHER)|GO:0005783(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)|GO:0051777(PANTHER) | |
| Cre05g0352 | 492 | Pfam | Cytochrome P450 | 44 | 462 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g0352 | 492 | SUPERFAMILY | Cytochrome P450 | 39 | 484 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g0352 | 492 | PRINTS | E-class P450 group I signature | 394 | 418 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g0352 | 492 | PRINTS | E-class P450 group I signature | 307 | 333 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g0352 | 492 | PRINTS | E-class P450 group I signature | 436 | 459 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g0352 | 492 | PRINTS | E-class P450 group I signature | 426 | 436 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g0352 | 492 | CDD | CYP90-like | 76 | 486 | - | - | |
| Cre05g0352 | 492 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 429 | 438 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre05g0352 | Cre-Chr5:3208308 | Cre10g0438 | Cre-Chr10:3295159 | 2.70E-133 | dispersed | |
| Cre09g0888 | Cre-Chr9:8880721 | Cre05g0352 | Cre-Chr5:3208308 | 4.80E-111 | transposed | |
| Cre10g0437 | Cre-Chr10:3275604 | Cre05g0352 | Cre-Chr5:3208308 | 1.30E-104 | wgd | |
| Cre11g0766 | Cre-Chr11:4859582 | Cre05g0352 | Cre-Chr5:3208308 | 6.60E-21 | wgd | |
| Cre05g0352 | Cre-Chr5:3208308 | Cre06g0846 | Cre-Chr6:1775472 | 6.40E-199 | wgd | |
| Cre05g0352 | Cre-Chr5:3208308 | Cre09g1177 | Cre-Chr9:13635051 | 8.20E-130 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre05g0352 | K04123 | - | csv:101221667 | 944.495 |