Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre05g0380 ATGTATGAGGCTGAGATCCACAATGGTTTCGGCAAATCCTCCATTTTCTCAGCTTCCAAACAGAGCCAGCGGAACCCTTCCACTTCTCCTTCTCCTTCTTCATCTCTCTCCGACCTTGCGAGAGCCGAGCGACCCCCTTCTCTCTCCGCCATGTTCCGACGAGCTTCCAGCCTTTTGGCCCGCTCTTTTCTCTCTGCAAGGACCAGATCCTTCTCCACCGATCTGCCCGCAGCTGCTTCCACCGACGATGCCTTTGTCTCCGCCTGGAAGAAGGTGATCCCCAATATTGACCCTCCTAAAACTCCTCTCTCTTTCATGGCTCCTCGTCCTGCTACGCCTTCTTCCATCCCTTCTAAGCTCACTGTCAACTTCGTCCTTCCTTATGCCTCCGAACTCTCGGCCAAAGAGGTTGACATGGTCATAATTCCAGCAACAACTGGGCAAATGGGTGTTCTTCCTGGTCATGTAGCTACAATCGCCGAGTTAAAGCCAGGGGTTCTATCAGTACACGATGGGAGTGACATCAAAAAATACTTCGTCAGCAGTGGTTTTGCATTCATCCATGGCAACTCATACGCTGACATAATCGCTGTCGAAGCTGTGCCTGTAGATCAAATCGATGCTAGCCAAGTACAGAAGGGTCTTGCTGAATTCACCCAGAAGTTGAACTCTGCCTCAACAGACTTGGAGAAAGCCGAAGCCCAAATCGGAGTTGACGTGCACAGTGCCCTGAATTCTGCCCTTACAGGATAG 753 51.13 MYEAEIHNGFGKSSIFSASKQSQRNPSTSPSPSSSLSDLARAERPPSLSAMFRRASSLLARSFLSARTRSFSTDLPAAASTDDAFVSAWKKVIPNIDPPKTPLSFMAPRPATPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVHDGSDIKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDASQVQKGLAEFTQKLNSASTDLEKAEAQIGVDVHSALNSALTG 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3472300 3474488 + CrPI670011_05g003800.1 Cre05g0380 496893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre05g0380 250 Coils Coil 215 235 - -
Cre05g0380 250 Hamap ATP synthase epsilon chain [atpC]. 118 238 IPR001469 GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro)
Cre05g0380 250 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 76 250 IPR001469 GO:0000275(PANTHER)|GO:0015986(InterPro)|GO:0015986(PANTHER)|GO:0045261(InterPro)|GO:0046933(PANTHER)|GO:0046933(InterPro)
Cre05g0380 250 FunFam ATP synthase subunit delta 207 249 - -
Cre05g0380 250 Gene3D - 108 206 IPR036771 -
Cre05g0380 250 CDD F1-ATPase_delta 120 243 IPR001469 GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro)
Cre05g0380 250 MobiDBLite consensus disorder prediction 13 42 - -
Cre05g0380 250 Gene3D - 207 249 - -
Cre05g0380 250 FunFam ATP synthase delta 109 206 - -
Cre05g0380 250 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 120 191 IPR020546 GO:0015986(InterPro)
Cre05g0380 250 MobiDBLite consensus disorder prediction 13 40 - -
Cre05g0380 250 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 120 201 IPR036771 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre05g0380 K02134 - csv:101206104 350.517