Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre05g0385 ATGTCTTTCAATCAATCAAGGCATGATAAGAATGAGGATCCTCAGTTTAAGAAATCTGGGCGATCGTCGAGCTTCAATCAACAGAAAATCTCTTGTGAACTTCATTCTAAGCCGGGCGATTCCGGCAGGTATGCGCCGCCGATCGTCTCCAACCATAGTGTTAAGCAGTCTAACGATGCGCAACAAGCACGGAAAACTAGGGCTGGTGTATCCTCTGTAAGTTCTACCGTTTCTACTACCCCTCGGGAAGGGCAAAACGGTTCTCATGTGCAGCCGCAACAGAATGGTTCAGCATCCAATCCAGTAAAATTGTCAGGATCCCAAAGCGGGGTTGTTAAAAAAAATGCAACTTCTCGAACGGCCTCCAAGACTTCTGATGCATTTTTAGAATCCAAGAGCGGAATTGTTCAAAATAAAGCGACTTCTAAGCCTACCTCAAAAACTTTCGGCACTACCTCCTTTAAAGACCTGGGGGAACAGCATATGACATTTCCACTTCAATTTGGATCCTTAAGTCCTGGTTTCCAGATTCCTAGGACCAGCTCAGCTCCTTCGAATCTGCAAGAACAGATATTGAACCAGGCACCACGCCATGTGTTTAAATCTGTACCTTCAGGGTCAGTGCAGCCAGTACCCAGACAACCAATAGCAAACAATGATTCCAGTGTCTGTGATCAACCAAATATTGGAACGTCCAATCCAGAGCCAGAGACCAAAAAGGAGATGCCAGTCTCGTCAGGAGCACCCGTAAGCCAGATTCAGAAGCCTTCCCATGTATCATTTGTTAGTCACAGAGCTTCTATTTCCCTCCCTGACAGTAAGAGTATGAGCCTTGTGCATCATGTTGCTAATTCACCTAATGTGAAAGAAGTCCAAGTTCATGATGAGAACTCTACTTCCTCAGCAGCAAAGCATGTGGCAATGCAGTCTCTTCCTGGGTCTTTGACGCAGGTCATCTACTCATGTCCTAAAGAAAGCCTATCTAAGTCCAACTCAAATAAGGCCGATAACAAAGTATCCGGCAAGAAAGGACCGATTCAACTGCTGCATCAGGTTGAGGTTGCAGATCCCATTTTTTATACTAAGCTGGAATCCTCTTTGCAATTCGAGCAATCAAAGCATGAGCTCGTTGGAACAGAAAAGGTAGGAGCAAGAAGATCGCCTGATTCTCAAGATAACATAGAACAAAGTAAACCACCATCTTGTATGAAGCCAACGGCAATTAATAACGGCAATTCAACGTCAAAAACACTGAAAGAAGTTGGCAGTACAAACGACAATAATGTTCTTTCTAACTCCATAACTCATGGTTGTAAGACTTCACCTATTATTATATCTTCTTGTCAAAGCGATAGTAACACTATCGATGATACTGTAGTTTGCCGAGCTGATCTGCAATCTCCTCTTGTTGAAACGTCTGACCTCTCAGAGATGAAGCAGGAAGGAGATAGAATAGAGCACACAGGTGGTCAATGTGACCCTAATTTTAGACCCTTTATTGAAGATAAATCTGTCATAGACATAAATAAGATGAGGAATAGGTCGAAGAAGAAGAGGAAGGAAATTCTTCGGAAGGCAGATGCTGCTGGGACTACTTCCGACCTTTATATGGCATATAAAGAACCTGAAGAGAAGAAAGAGACAACTATCTCTGCAGAAAGCTCCAATGCGAGCATAAATATGAAAAACGAGTCTGCTGGTTCCTTTAAGGAAGAGGCTGCCTTGACCAAGAAGGATGTTCAGGGTAAACTCGAGCCAGATGATTGGGAAGATGCAGTTGATAATTCTACTGATACATTGAAATACGAGGGTGGTTTTGAGGATAAGGCCAACGGAAAAGTAGCATTGCACCTCGAGGATGGGAGTAGAGATCTGGCCAAAAAGTACTCCAGAGATTTCCTCCTGAAATTCGCCGAGCAGTTCATGGACCTTCCCGATGGGTTTGAAGTTTCTCCCAACATGAAGGCTTTAATGAGTAACCATGGCTCTCGTTCTGTCAATAGTAATTCACCTGCTAATCATGGAAAAATGGATAAGCCAAGTGGAGGGTCTCGACTTGATCATCGTGCTATTACTGTGGATGACAGACTATTTGCTTCAGGGCGGCATTCGCACTTGGATAGCACTCGACCTACTCAAGGTGCTAACAATAGTGCTGTAAAGACCCCTTGGGCGCACACCGGTTCACAGGGAAAAATCCAAAGAAATGGCTCCAATACTGATAGGTGGCAAAGAGATGCTAGTTTTCAGCTGAAAGGTATAATTTCTCCTTCAACTCCATCACAGGTGATGCACAGAGCCGAGAAGAAATATGAAGTGGGTAAAGTGGCTGACCAGGAAGAGACCAAACAAAGGCAGCTGAAGGCTATACTAAACAAGCTAACTCCACAAAATTTTGATAAACTCTTTGAACAAGTGAAAGCAGTTAATATTGATAGTTCGAAGACACTAAGTGGTGTCATCTCTCAGATATTTGACAAAGCTCTGATGGAGCCTACTTTCTGTGAAATGTATGCCAATTTTTGTCTCCATCTGGCTGGCGAGTTACCTGATTTTAGCGATGATAATCAGAAGATTACTTTTAAGAGGTTGCTTTTAAACAAATGCCAAGAGGAATTTGAGAAAGAGCAGGAAGAAAATGATGAAGTTAATAAGGTCGGTGAGATGAAACAGTCTGCAGAGGAACGAGAAGTGAATAGAATAAAGGCGCGCAGAAGAATGCTTGGCAACATTAGGTTAATTGGGGAGCTTTACAAGAAAAAGATGATAACAGAGAAAATTATGCATGTATGCATCAAGAAATTGTTAGGTCAGTACCAAAATCCGGATGAGGAAGATATTGAAGCATTATGCAAATTGATGACCACTATAGGAGAGATGATAGATCACCCCAAAGCTAAGGAGCATATGAATGCATATTTTGAGATGATGACTAAATTATCTAATAACATCAAGCTGTCATCTAGAGTTAGATTCATGTTGAAGGATGCAATTGATTTGAGAAAGAATAAATGGCAGCAGAGGAGAAAAATTGAAGGACCTAAAAAAATTGATGAAGTGCACAGGGATGCTGTGCAAGAACGTCAAGCGCAAGCTAATAGATTAAGCCGTGGTCCTGGAATCAGTGCACCATTGAGGAGGGGAACATCCATGGATTTTGGTTCAAAAGCGCCTGCATTATTGCCTTCTCCCAATGCCCAGATTGGTGGTTTTCACGGTTTTTCAACCCAGAATTGTGGTTCAAGCAGTCAAGACGCTCGCTTTGAAGGTAAACTACGGTCTCCTGAGGCCAAGGCATTCCCAACTCCATTGCCCCAAAGACCTATCAGTGATGATGCTATCACTTTAGGTCCCCAGTGTAGTTTAGCTAGAGGAATGTCCATTAGAGGGTCAAGATCCATTTCATCCAATTCATTAGTAGATTTGTCCTTGCCGACTGGTAATAACTGCCAAAGAATGGTAGCTGCTTTAAATCCTCATGGCTTTGTACCAGAGCATGCAATTTCCAACTCCAGAGGGGACATCCCTTCAAGAAAATTTTCAAAGGGAACACTAGGTTCAGAATCCTTCGATCAGGCGACGAGTACACTGGAACCTGGTATTAGTTTTGGATCTAGGCAAAGGGGAAACGTTGATAGCGGTCTTGGGAGGTCTCAGCCGACCAAATATGAACAACCAGCTTTGACTACGAATGGCCATTCTGAGGTTACGTCCAAAGAACATCTACGAGATAAGTCCATAGCAGCTATTAGGGAATATTACAGTGCTAGAGATGAGAAGGAAGTTACCCTGTGCATCAAGGACTTGAATTCGCCTGAATTCCATTCATCCATGATTTCTCTTTGGGTCACAGACTCCTTTGAGAGAGAAAACACAGAAAGGGATCTTTTAGCTAAACTTCTTGTTAGCCTCACCAAATCAAAGGATGATACATTGACTCAACTCCAACTTCTCAAAGGAATCCAGCTCGTTGTTGCCACACTGGAGGATGCTGTGAATGATGCCCCAAAAGCTCCAGAATTTATGGGCCGATTACTCGCTAACTTGGTGGTGGAAAACTTGATTTCATTGAAAGAAATCGGGAAGTTTATATATGAAGGTGGAGAGGAGGCTGGGAAGCTTCTACAAGTTGGGCTTGCAGCTGATGTTCTTGGCAACGTGCTGGAAGTAGTTCAATTGGAGAAAGGTCAGATTTTCTTGAACGAAATTCTTAAATGTTCTGATCTACAATTAGAAACATTTCGCCCTTCATACCCAATCAAATCAACAAAGTTAGAGAAATTTATTTAG 4290 42.68 MSFNQSRHDKNEDPQFKKSGRSSSFNQQKISCELHSKPGDSGRYAPPIVSNHSVKQSNDAQQARKTRAGVSSVSSTVSTTPREGQNGSHVQPQQNGSASNPVKLSGSQSGVVKKNATSRTASKTSDAFLESKSGIVQNKATSKPTSKTFGTTSFKDLGEQHMTFPLQFGSLSPGFQIPRTSSAPSNLQEQILNQAPRHVFKSVPSGSVQPVPRQPIANNDSSVCDQPNIGTSNPEPETKKEMPVSSGAPVSQIQKPSHVSFVSHRASISLPDSKSMSLVHHVANSPNVKEVQVHDENSTSSAAKHVAMQSLPGSLTQVIYSCPKESLSKSNSNKADNKVSGKKGPIQLLHQVEVADPIFYTKLESSLQFEQSKHELVGTEKVGARRSPDSQDNIEQSKPPSCMKPTAINNGNSTSKTLKEVGSTNDNNVLSNSITHGCKTSPIIISSCQSDSNTIDDTVVCRADLQSPLVETSDLSEMKQEGDRIEHTGGQCDPNFRPFIEDKSVIDINKMRNRSKKKRKEILRKADAAGTTSDLYMAYKEPEEKKETTISAESSNASINMKNESAGSFKEEAALTKKDVQGKLEPDDWEDAVDNSTDTLKYEGGFEDKANGKVALHLEDGSRDLAKKYSRDFLLKFAEQFMDLPDGFEVSPNMKALMSNHGSRSVNSNSPANHGKMDKPSGGSRLDHRAITVDDRLFASGRHSHLDSTRPTQGANNSAVKTPWAHTGSQGKIQRNGSNTDRWQRDASFQLKGIISPSTPSQVMHRAEKKYEVGKVADQEETKQRQLKAILNKLTPQNFDKLFEQVKAVNIDSSKTLSGVISQIFDKALMEPTFCEMYANFCLHLAGELPDFSDDNQKITFKRLLLNKCQEEFEKEQEENDEVNKVGEMKQSAEEREVNRIKARRRMLGNIRLIGELYKKKMITEKIMHVCIKKLLGQYQNPDEEDIEALCKLMTTIGEMIDHPKAKEHMNAYFEMMTKLSNNIKLSSRVRFMLKDAIDLRKNKWQQRRKIEGPKKIDEVHRDAVQERQAQANRLSRGPGISAPLRRGTSMDFGSKAPALLPSPNAQIGGFHGFSTQNCGSSSQDARFEGKLRSPEAKAFPTPLPQRPISDDAITLGPQCSLARGMSIRGSRSISSNSLVDLSLPTGNNCQRMVAALNPHGFVPEHAISNSRGDIPSRKFSKGTLGSESFDQATSTLEPGISFGSRQRGNVDSGLGRSQPTKYEQPALTTNGHSEVTSKEHLRDKSIAAIREYYSARDEKEVTLCIKDLNSPEFHSSMISLWVTDSFERENTERDLLAKLLVSLTKSKDDTLTQLQLLKGIQLVVATLEDAVNDAPKAPEFMGRLLANLVVENLISLKEIGKFIYEGGEEAGKLLQVGLAADVLGNVLEVVQLEKGQIFLNEILKCSDLQLETFRPSYPIKSTKLEKFI 1429
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3508626 3514937 + CrPI670011_05g003850.1 Cre05g0385 496898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre05g0385 1429 MobiDBLite consensus disorder prediction 393 424 - -
Cre05g0385 1429 ProSiteProfiles MI domain profile. 1241 1365 IPR003891 -
Cre05g0385 1429 MobiDBLite consensus disorder prediction 207 252 - -
Cre05g0385 1429 MobiDBLite consensus disorder prediction 50 125 - -
Cre05g0385 1429 Gene3D - 784 1017 - -
Cre05g0385 1429 MobiDBLite consensus disorder prediction 659 675 - -
Cre05g0385 1429 MobiDBLite consensus disorder prediction 659 686 - -
Cre05g0385 1429 FunFam Eukaryotic translation initiation factor 4G 784 1017 - -
Cre05g0385 1429 MobiDBLite consensus disorder prediction 18 34 - -
Cre05g0385 1429 SUPERFAMILY ARM repeat 1238 1419 IPR016024 -
Cre05g0385 1429 MobiDBLite consensus disorder prediction 1184 1235 - -
Cre05g0385 1429 MobiDBLite consensus disorder prediction 705 741 - -
Cre05g0385 1429 SMART if4_15 784 1004 IPR003890 GO:0003723(InterPro)|GO:0005515(InterPro)
Cre05g0385 1429 SMART ma3_7 1242 1356 IPR003891 -
Cre05g0385 1429 MobiDBLite consensus disorder prediction 877 897 - -
Cre05g0385 1429 MobiDBLite consensus disorder prediction 381 424 - -
Cre05g0385 1429 SUPERFAMILY ARM repeat 778 1006 IPR016024 -
Cre05g0385 1429 MobiDBLite consensus disorder prediction 1 125 - -
Cre05g0385 1429 FunFam Eukaryotic translation initiation factor 4G 1235 1428 - -
Cre05g0385 1429 Coils Coil 866 886 - -
Cre05g0385 1429 Gene3D - 1233 1429 - -
Cre05g0385 1429 MobiDBLite consensus disorder prediction 1184 1240 - -
Cre05g0385 1429 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 253 1418 IPR045208 GO:0003729(PANTHER)|GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0016281(PANTHER)
Cre05g0385 1429 Pfam MA3 domain 1243 1355 IPR003891 -
Cre05g0385 1429 MobiDBLite consensus disorder prediction 1 17 - -
Cre05g0385 1429 MobiDBLite consensus disorder prediction 203 252 - -
Cre05g0385 1429 MobiDBLite consensus disorder prediction 703 741 - -
Cre05g0385 1429 Pfam MIF4G domain 785 1004 IPR003890 GO:0003723(InterPro)|GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g0385 Cre-Chr5:3508626 Cre06g2121 Cre-Chr6:28972978 1.30E-53 dispersed
Cre05g0385 Cre-Chr5:3508626 Cre06g1613 Cre-Chr6:11772458 1.90E-272 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre05g0385 K03260 - csv:101222372 2215.27