Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre05g0427 ATGGGTAGCGGAGAAAAGGTTTTCACCTTGAAGGAAGTCGCTGAGCACAACAATCACAAGGACTGTTGGCTCATCATCAGTGGCAAGGTATATGATGTGACCAAGTTCTTAGAGGACCATCCTGGTGGTGACGATGTTTTGTTATCAGCTACAGGAAAAGATGCAACCGACGACTTCGAAGACGTGGGCCACAGTGACAATGCAAGAGAGATGATGGATCAATACTATGTTGGGGAGATTGATGCTTCAACAATTCCAAAGAAGGTCGCCTACACACCTCCAAAGCAGCCTCATTACAATCAGGACAAGACATCCGAGTTCATCATCAAGCTTCTCCAATTCCTCGTCCCGCTTGCAATTTTGGGATTGGCAGTTGCCATACGCTTCTACACCAAACAAGCTTGA 405 46.42 MGSGEKVFTLKEVAEHNNHKDCWLIISGKVYDVTKFLEDHPGGDDVLLSATGKDATDDFEDVGHSDNAREMMDQYYVGEIDASTIPKKVAYTPPKQPHYNQDKTSEFIIKLLQFLVPLAILGLAVAIRFYTKQA 134
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3865275 3867612 + CrPI670011_05g004270.1 Cre05g0427 496940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre05g0427 134 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Cre05g0427 134 SMART Cyt_b5_2 8 81 IPR001199 -
Cre05g0427 134 FunFam Cytochrome b5 type B 3 85 - -
Cre05g0427 134 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037(InterPro)
Cre05g0427 134 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 80 IPR001199 -
Cre05g0427 134 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 6 90 IPR036400 -
Cre05g0427 134 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Cre05g0427 134 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Cre05g0427 134 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Cre05g0427 134 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Cre05g0427 134 PANTHER CYTOCHROME B5 5 131 IPR050668 GO:0005783(PANTHER)|GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
Cre05g0427 134 Gene3D - 2 86 IPR036400 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g0123 Cre-Chr5:1410014 Cre05g0427 Cre-Chr5:3865275 6.50E-35 dispersed
Cre05g0427 Cre-Chr5:3865275 Cre09g2485 Cre-Chr9:44142096 2.40E-47 dispersed
Cre06g1046 Cre-Chr6:4193297 Cre05g0427 Cre-Chr5:3865275 2.60E-30 transposed
Cre06g1099 Cre-Chr6:4868051 Cre05g0427 Cre-Chr5:3865275 2.20E-09 transposed
Cre08g0985 Cre-Chr8:22964277 Cre05g0427 Cre-Chr5:3865275 1.30E-26 transposed
Cre05g0427 Cre-Chr5:3865275 Cre06g1552 Cre-Chr6:10651270 3.90E-58 wgd
Cre05g0427 Cre-Chr5:3865275 Cre07g0553 Cre-Chr7:3362635 1.50E-49 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre05g0427 K23490 - csv:101214209 275.404