Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre05g0467 | GTTGAGGTCAAATCATCAAATGTCTATCCGAAGGATCCTGAATTTCCGCCATGTGGTGTGGATGATATGACAAAACTAGCTTATTTGCATGAGCCGGGGCTTCTACAAAATTTAAAATCTCGTTACGATGTTAATGAAATTTATACATATACTGGAAGTATACTAATAGCCGTAAATCCTTTTCGAAGACTTCCTCATTTATATGATAATCACATGATGCAACAATATAAAGGTGCAGCTTTAGGTGAGCTGAGCCCGCATCCCTTTGCCATTGCAAATTCTGCTTATAGACAGATGATTAATGAAAGTATCAGCCAGTCAATTTTAGTTAGTGGGGAAAGTGGTGCTGGAAAAACGGAGAGTACAAAGATGCTCATGCGCTATCTTGCCCATGTCGGAGGGAGAGCTGGAGGGAAGGCTGCAACTGGTGAACGTTCTGTAGAGCAGCAAGTACTAGAGTCCAACCCTGTTCTAGAAGCATTTGGCAATGCAAAGACTGTTAGAAACAATAATTCAAGCCGGTTTGGTAAATTTGTGGAGATCCAATTTGATCAGAGTTGGAGAATTTCTGGAGCTGCTATTAGAACTTATTTATTAGAACGTTCCCGTGTTTGCCAAGTGTCTGATCCTGAGAGGAATTATCATTGCTTCTATATGCTTTGTGCTGCACCAACAGAGGAAATTGAAAAGTATAAATTAGGGAATCCAAGAACATTTCATTACCTTAATCAATCTAATTGCTGTGAACTTGATGGAGTGGATGATTCCAAGGAATATCTTTCTACCAGGAAAGCCATGGATGTTGTTGGAATAAGTACAACTGAGCAGGATGCAATATTTCGAGTGGTAGCTGCGGTACTTCATTTGGGCAATGTTGAATTTGCAAAGGGGAAGGATGCAGATTCCTCTGAACCGAAGGATGACAAAGCTCGGTTCCATCTCAAAATGGCAGCAGAACTATTCATGTGTGATGAGAAGGCTCTTGAAGATTCAATGTGTACTCGTGTGATAGTTACACGTGATGAAACCATAACTAAATGTCTCGATCCGGACTCTGCATCTCTTAGTAGGGATGCTTTAGCAAAGATTGTTTATTCAAGATTATTTGATTGGATTGTTGATAAGATTAATAACTCAATTGGCCAAGATCCTCATTCAAAGAACTTAATTGGGGTTCTGGATATCTATGGATTCGAGAGTTTCAAGACAAACAGCTTTGAGCAATTCTGTATTAACCTGACCAATGAGAAATTGCAGCAACATTTCAACCAGCATGTGTTCAAGATGGAGCAAGAAGAATATACAAAAGAAGAAATTGACTGGAGTTATATTGAATTTATTGATAATCAGGATGTTCTTGATCTCATTGAGAAGAAACCTGGTGGCGTCATTGCTCTTCTGGATGAGGCTTGCATGTTTCCGAGATCCACACATGACACTTTTGCGCAGAAACTATATCAAACTTTTAAGGACCATAAGCGTTTTAGTAAGCCGAAATTGTCACGAACTGACTTCACAATTTGTCATTATGCTGGTGATGTTACGTACCAAACTGAACTCTTCTTGGACAAAAACAAAGATTATGTTGTTGCGGAGCATCAAGCACTGTTGAGTGCTTCTAAGTGCCCCTTTGTTTCGGGGCTTTTCCCCCCCTTACCTGAAGAAACCTCCAAATCATCCAAGTTCTCATCAATAGGGACTCGATTTAAGCAACAACTTCAATCTTTGCTTGAGACACTAAATGCTACTGAGCCACACTACATACGCTGTGTAAAGCCAAACAATCTTCTTAAACCAGCCATCTTTGAGAACAATAATGTTTTACAGCAGCTCCGATGTGGGGGAGTCATGGAAGCAATCAGGATCAGTTGTGCTGGATATCCCACTAGGAAGACATTTGATGAATTTATTGGTCGGTTTACTATCTTGGCGCCTGATGTTTTGAAGGGGAGCTCTAATGAAGCAACTGCGTGTAAGAGGCTTTTGGAGAAAGTGAACCTTAAAGGGTATCAGATTGGTAAAACAAAAGTGTTTCTCAGGGCTGGTCAAATGGCAGAATTAGATGCTTGCCGAACTGAGGTTTTGGGAAGATCTGCTATTGTTATCCAAAGGAAAGTTCGCTCATATTTGGGGCGCAAAAACTTTATTTTGTTGCGGTTGGCTGCTATTCAAATTCAAGCCCTGTGTAGAGGGCAAGTTGCACGCCAGCATTATGAAGACATCAGAAAGGAAGCTGCTTCTATCAAAATCCAAAAGTATTGGCGTATGCATTTTGCCCGATGTTGCTATAAAAGATTGTGCTCTTCAGCTGTAGCTATTCAAGCTGGTATCCACGGTATGATTGCCCGTAAAGAGCTTGAGTTCAGGAGGCAGACAAGAGCTGCTATTATCATTCAGAGTCGATGTCGGCAATACTTGGCCCGCATGCATTATTTGAGGATAAAAAAAGCTGCAATTACTACTCAATGTGCTTGGAGAGGAAGAGTTGCACGCAAAGAACTTCGAAAGCTTAAAATGGCTGCTAAGGAAACAGGCGCTCTCCAAGCTGCCAAAAATCTGCTGGAGAAGCAAGTGGAAGAACTAACATGGAGATTGCAGCTAGAGAAACGAATGCGGGCTGACATGGAGGAAGCCAAGAGTAAAGAAAACACAAAATTGAAGGCTGATTTGGAAGAAATGAGAACTCAATTTCAGGAAACGAAAGCGCTGCTTAATGAGGAACGTGAAGCTGCAATGAAAGTAGTTGAGCAAGTTCCAGTCATACAGGAGGTTCCCGTTGTTGATCATGAGCTGATCAATAAGTTAACTACTGAAAATGAACAACTTAAGGCTCTTGTAAGTACTTTGGAAAATAAAATTGATGAAACAGAAAGGAAATTTGAGGAAAGTAACAGACTTAGTGAAGAGCGGCTGAAGCAGGCTACGGAGGCAGAGTCAAAGATAATTGAATTAAAGACTGCCATGCAAAGGCTTGAGGAAAAATTATCTGACTTGGAAACTGAGGACCAAATTCTGAGGCAGCAAACACTGCTAAAGCCTCCTTCAAGAAAGATGTCTGGACGCATAGCAATGCAGCCTTTGGAAAATGGCCACCATGAATTACTAAGCAACGCTCCATCGAAAAAGTACGGTACTGATGCTGATGCAAAATTGAGGAGATCCCAAATTGAAAGGCAGAATGAAGGCATGGATGCTCTGTCAAAATACCTGACACAGGATCTTGGGTACAGTGAGGGAAAACCTGTTGCTGCTTTTGTAATTTATAAATCTTTTCTCCATTGGAGATCATTTGAAGCAGAAAAAACAAGTGTTTTTGATCGGCTTATTCAGCTGATTGGTTCTGCAATCGAGAATCAGGATGATAATGATCTTATGACCTATTGGTTATCCAACACAACTACATTGTTGTTCCTTCTTCAAAAGAGTTTAAAAACCACACCACGGAAGCCTCCCACCCCTACATCATTTTTTGAGCGGATGACCCAAGGTTTTCGGTCATCTTCTGCCCTTCCAGTTGGCACCCTTGATGTGGTGCGGCAAGTGGAAGCCAAATATCCTGCCCTACTTTTCAAGCAGCAGCTAACTGCGTATGTAGAAAAGATATATGGAATAGTTAGAGACAACCTAAAGAAGGAACTATCGCCGTTGATTTCAACTTGTATTCAGGCTCCCAGATCTTCGAGAGGAAATATTTTGAAATCATCTGGCCAGGAAAATAGTAGTAGCCCTTCCAGTAATTCATGGAGCAGCATCATTGATAACCTTAATGATCATCTCTGTAGATTGCAAAAGAACTTCGTGCCTAACGTTTTGGTTCAGAAGATATTCTCTCAGGTTTTTTCATATATCAACGTTCAACTTTTTAACAGTCTTCTACTTCGTCGAGAGTGCTGTACGTTTAGCAATGGGGAATATGTGAAGTCAGGATTGGCTGAGTTAGAGATTTGGTGTGGCCAAGCACAAGAAGAGTATGCTGGGTCATCTTGGGATGAGCTAAAACCGGTGAGGCAAGCTGTTGGATTCTTGGTTATTCACCAGAAGTCTAGAATATCTTATGATGAAATTACAAATGATCTCTGTCCAATATTGAGCGTTCAACAGCTTTATAGAATATGTACTCTTTATTGGGACGACAATTACAATACCAGGAGTGTAGCTCCAGATGTTATTTCTAGCATGAAGGTTTTGATGACTGAGGATTCCAATGATGAAGATAGTAGTTCCTTTTTGTTGGATGACAATTCCAGTATACCTTTCTCAGTTGATGACGTATTCACTTCCCTGCAAGAAAAGAATTTTCAAGATATAAAGCCTCCGGCAGAACTACTGGAGAATCCGGCCTTCCAATTTTTACAGGAATAA | 4362 | 40.76 | VEVKSSNVYPKDPEFPPCGVDDMTKLAYLHEPGLLQNLKSRYDVNEIYTYTGSILIAVNPFRRLPHLYDNHMMQQYKGAALGELSPHPFAIANSAYRQMINESISQSILVSGESGAGKTESTKMLMRYLAHVGGRAGGKAATGERSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQSWRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPTEEIEKYKLGNPRTFHYLNQSNCCELDGVDDSKEYLSTRKAMDVVGISTTEQDAIFRVVAAVLHLGNVEFAKGKDADSSEPKDDKARFHLKMAAELFMCDEKALEDSMCTRVIVTRDETITKCLDPDSASLSRDALAKIVYSRLFDWIVDKINNSIGQDPHSKNLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFIDNQDVLDLIEKKPGGVIALLDEACMFPRSTHDTFAQKLYQTFKDHKRFSKPKLSRTDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCPFVSGLFPPLPEETSKSSKFSSIGTRFKQQLQSLLETLNATEPHYIRCVKPNNLLKPAIFENNNVLQQLRCGGVMEAIRISCAGYPTRKTFDEFIGRFTILAPDVLKGSSNEATACKRLLEKVNLKGYQIGKTKVFLRAGQMAELDACRTEVLGRSAIVIQRKVRSYLGRKNFILLRLAAIQIQALCRGQVARQHYEDIRKEAASIKIQKYWRMHFARCCYKRLCSSAVAIQAGIHGMIARKELEFRRQTRAAIIIQSRCRQYLARMHYLRIKKAAITTQCAWRGRVARKELRKLKMAAKETGALQAAKNLLEKQVEELTWRLQLEKRMRADMEEAKSKENTKLKADLEEMRTQFQETKALLNEEREAAMKVVEQVPVIQEVPVVDHELINKLTTENEQLKALVSTLENKIDETERKFEESNRLSEERLKQATEAESKIIELKTAMQRLEEKLSDLETEDQILRQQTLLKPPSRKMSGRIAMQPLENGHHELLSNAPSKKYGTDADAKLRRSQIERQNEGMDALSKYLTQDLGYSEGKPVAAFVIYKSFLHWRSFEAEKTSVFDRLIQLIGSAIENQDDNDLMTYWLSNTTTLLFLLQKSLKTTPRKPPTPTSFFERMTQGFRSSSALPVGTLDVVRQVEAKYPALLFKQQLTAYVEKIYGIVRDNLKKELSPLISTCIQAPRSSRGNILKSSGQENSSSPSSNSWSSIIDNLNDHLCRLQKNFVPNVLVQKIFSQVFSYINVQLFNSLLLRRECCTFSNGEYVKSGLAELEIWCGQAQEEYAGSSWDELKPVRQAVGFLVIHQKSRISYDEITNDLCPILSVQQLYRICTLYWDDNYNTRSVAPDVISSMKVLMTEDSNDEDSSSFLLDDNSSIPFSVDDVFTSLQEKNFQDIKPPAELLENPAFQFLQE | 1453 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 4215094 | 4239865 | - | CrPI670011_05g004670.1 | Cre05g0467 | 496980 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre05g0467 | 1453 | FunFam | Class V myosin | 399 | 541 | - | - | |
| Cre05g0467 | 1453 | ProSiteProfiles | Dilute domain profile. | 1106 | 1399 | IPR002710 | - | |
| Cre05g0467 | 1453 | FunFam | Myosin 2 | 272 | 389 | - | - | |
| Cre05g0467 | 1453 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 3 | 746 | IPR027417 | - | |
| Cre05g0467 | 1453 | Coils | Coil | 851 | 871 | - | - | |
| Cre05g0467 | 1453 | PANTHER | MYOSIN | 789 | 1398 | - | GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER) | |
| Cre05g0467 | 1453 | Coils | Coil | 876 | 910 | - | - | |
| Cre05g0467 | 1453 | Coils | Coil | 932 | 966 | - | - | |
| Cre05g0467 | 1453 | Gene3D | - | 212 | 270 | - | - | |
| Cre05g0467 | 1453 | SMART | MYSc_2a | 12 | 693 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cre05g0467 | 1453 | CDD | MyosinXI_CBD | 1057 | 1422 | IPR037975 | GO:0007015(InterPro) | |
| Cre05g0467 | 1453 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 748 | 843 | IPR027417 | - | |
| Cre05g0467 | 1453 | Gene3D | - | 399 | 583 | - | - | |
| Cre05g0467 | 1453 | Gene3D | - | 794 | 842 | - | - | |
| Cre05g0467 | 1453 | Gene3D | - | 745 | 793 | - | - | |
| Cre05g0467 | 1453 | Gene3D | - | 695 | 744 | - | - | |
| Cre05g0467 | 1453 | ProSiteProfiles | Myosin motor domain profile. | 18 | 692 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cre05g0467 | 1453 | Coils | Coil | 974 | 1008 | - | - | |
| Cre05g0467 | 1453 | ProSiteProfiles | IQ motif profile. | 814 | 843 | - | - | |
| Cre05g0467 | 1453 | ProSiteProfiles | IQ motif profile. | 768 | 795 | - | - | |
| Cre05g0467 | 1453 | ProSiteProfiles | IQ motif profile. | 718 | 747 | - | - | |
| Cre05g0467 | 1453 | SMART | DIL_2 | 1274 | 1381 | IPR002710 | - | |
| Cre05g0467 | 1453 | PRINTS | Myosin heavy chain signature | 442 | 470 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cre05g0467 | 1453 | PRINTS | Myosin heavy chain signature | 105 | 130 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cre05g0467 | 1453 | PRINTS | Myosin heavy chain signature | 48 | 67 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cre05g0467 | 1453 | PRINTS | Myosin heavy chain signature | 389 | 417 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cre05g0467 | 1453 | PRINTS | Myosin heavy chain signature | 156 | 183 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cre05g0467 | 1453 | Pfam | DIL domain | 1274 | 1379 | IPR002710 | - | |
| Cre05g0467 | 1453 | FunFam | Myosin heavy chain | 212 | 267 | - | - | |
| Cre05g0467 | 1453 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 272 | 561 | - | - | |
| Cre05g0467 | 1453 | FunFam | unconventional myosin-Va | 793 | 841 | - | - | |
| Cre05g0467 | 1453 | Pfam | IQ calmodulin-binding motif | 816 | 835 | IPR000048 | GO:0005515(InterPro) | |
| Cre05g0467 | 1453 | Pfam | IQ calmodulin-binding motif | 745 | 764 | IPR000048 | GO:0005515(InterPro) | |
| Cre05g0467 | 1453 | Pfam | IQ calmodulin-binding motif | 697 | 715 | IPR000048 | GO:0005515(InterPro) | |
| Cre05g0467 | 1453 | Pfam | IQ calmodulin-binding motif | 721 | 738 | IPR000048 | GO:0005515(InterPro) | |
| Cre05g0467 | 1453 | Pfam | IQ calmodulin-binding motif | 792 | 811 | IPR000048 | GO:0005515(InterPro) | |
| Cre05g0467 | 1453 | Pfam | Myosin head (motor domain) | 20 | 680 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cre05g0467 | 1453 | Gene3D | Kinesin motor domain | 21 | 622 | IPR036961 | - | |
| Cre05g0467 | 1453 | CDD | MYSc_Myo11 | 32 | 680 | IPR036018 | - | |
| Cre05g0467 | 1453 | FunFam | Myosin XI D | 695 | 744 | - | - | |
| Cre05g0467 | 1453 | SMART | iq_5 | 790 | 812 | IPR000048 | GO:0005515(InterPro) | |
| Cre05g0467 | 1453 | SMART | iq_5 | 717 | 739 | IPR000048 | GO:0005515(InterPro) | |
| Cre05g0467 | 1453 | SMART | iq_5 | 765 | 787 | IPR000048 | GO:0005515(InterPro) | |
| Cre05g0467 | 1453 | SMART | iq_5 | 813 | 835 | IPR000048 | GO:0005515(InterPro) | |
| Cre05g0467 | 1453 | SMART | iq_5 | 694 | 716 | IPR000048 | GO:0005515(InterPro) | |
| Cre05g0467 | 1453 | SMART | iq_5 | 742 | 764 | IPR000048 | GO:0005515(InterPro) | |
| Cre05g0467 | 1453 | ProSiteProfiles | IQ motif profile. | 743 | 772 | - | - | |
| Cre05g0467 | 1453 | ProSiteProfiles | IQ motif profile. | 791 | 820 | - | - | |
| Cre05g0467 | 1453 | Gene3D | - | 627 | 690 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre05g0467 | Cre-Chr5:4215094 | Cre09g0341 | Cre-Chr9:3326430 | 0.00E+00 | dispersed | |
| Cre05g0467 | Cre-Chr5:4215094 | Cre06g0901 | Cre-Chr6:2375693 | 0.00E+00 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre05g0467 | K10357 | - | csv:101221506 | 2735.67 |