Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre05g0524 ATGGAAAAGCTTATTAGTGGCGGCAAAGAAGGCGAGAAAAAGAGGGACAAAAATGGAATATTCGGAGCTAAGCGCGACTCAGATTCCAAGCACGTGAGTTGGAGGGTGTTGCCGCTTCTTAAATATCCCATCATCCCCACCTCATTTCTCTCCATCGCCGCTCCTTCCTCCTCCTCCTCCGCCGCCGCCTCCATTTTCCGGCGCAGTGAAGATCGCAGTCATTCAGTGCTTACTCTCATTCGGTCCACGCTTCTTAGGGGAAGAATTTTGAGAAGAGAAACCATTGTGATAGCTGGAATGGGCTTTTTCACAGACGCATATGATCTATTTTGTGTATCTCTTGTTACCAAACTATTGGGTCGAATTTACTATCACAAAGAAGGCTCAAACAAGCCTGGTGAATTGCCTTCAAACATAGCCGCCGCTATAAACGGCGTCGCTTTCTGTGGAACCCTCTCTGGCCAGCTCTTCTTTGGGTGGCTTGGTGACAAGATGGGCCGGAAACGAGTCTACGGAATGACCCTTATGCTTATGGTCATTTGCTCTGTAGCTTCCGGACTATCTTTCAGCAGCACCCCAACATCTGTGGTGGCCACTCTCTGTTTTTTCCGATTCTGGCTTGGATTTGGCATCGGCGGCGATTACCCACTTTCCGCCACCATCATGTCGGAATATGCCAATAAAAGGACACGAGGGGCGTTCATTGCCGCTGTCTTTGCAATGCAAGGGTTTGGGATTTTGGCCGGTGGGGTGGTGGCAATAATTGTCTCCGCCGCATTTGACGCCAAATTCCCATCTCCATCGTATAAGGACAATCCCACCGCCTCAACCGTCCCACAAGCTGATTATGTGTGGCGAATTATTGTGATTTTTGGTGCCTTTCCGGCTCTACTCACTTATTACTGGCGAATGAAAATGCCTGAAACTGCTCGTTACACCGCCTTGGTTGCTAAAAATGCCAAACAAGCAGCCGCTGATATGTCTAAAGTTCTACAAGTTGAATTGGAATCAGAGCAGGAAAAAATCGACGAGGGAAAATCGAAGAATAATGACTTTGGGTTGTTCTCAATGAGTTTTGTTCGTCGGCATGGGCTTCACTTGCTGGGGACTACTACTACATGGTTCTTGTTAGACATTGCATTTTACAGTCAGAATCTCTTCCAGAAGGACATTTTCACTGCCATTGGTTGGCTTCCTCCACCAGAGACGATGAACGCCATTGAAGAAGTTTTCAGAATCGCCAAAGCTCAAACCCTCATTGCATTGTGCAGTACAGTACCTGGGTATTGGTTCACTGTGGCGCTCATTGACGTAATGGGACGGTTTGCTATTCAATTGATGGGGTTTTTCTTCATGACGGTATTTATGTTCGCATTGGCCATTCCATACAAGCATTGGACTTTAGAAGCCAATAGAATTGGGTTTGTTGTGATGTATTCGTTGACGTTCTTCTTCGCGAATTTTGGGCCAAATGCCACCACTTTCGTGGTTCCAGCAGAGATATTTCCAGCCAGACTTCGATCGACGTGCCATGGAATATCGGCTGCTTCTGGAAAAGCAGGGGCAATTGTGGGGGCGTTCGGGTTTCAGTATGCTGAAAAGGGGCTTGGAGTGAAGAAGACATTGATAATTCTTGGTGTTGTGAATGCTCTTGGTATGTTCTTCACTCTGTTGGTACCGGAATCGAAGGGGAAGTCTTTGGAAGAAATGTCGGGTGAAGCTGGAGATGAGGCAGAGAGCAAACCAGAGTCAAGGACTCAATCTGATCACAGAACTATGCCTGTTTGA 1788 47.2 MEKLISGGKEGEKKRDKNGIFGAKRDSDSKHVSWRVLPLLKYPIIPTSFLSIAAPSSSSSAAASIFRRSEDRSHSVLTLIRSTLLRGRILRRETIVIAGMGFFTDAYDLFCVSLVTKLLGRIYYHKEGSNKPGELPSNIAAAINGVAFCGTLSGQLFFGWLGDKMGRKRVYGMTLMLMVICSVASGLSFSSTPTSVVATLCFFRFWLGFGIGGDYPLSATIMSEYANKRTRGAFIAAVFAMQGFGILAGGVVAIIVSAAFDAKFPSPSYKDNPTASTVPQADYVWRIIVIFGAFPALLTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVELESEQEKIDEGKSKNNDFGLFSMSFVRRHGLHLLGTTTTWFLLDIAFYSQNLFQKDIFTAIGWLPPPETMNAIEEVFRIAKAQTLIALCSTVPGYWFTVALIDVMGRFAIQLMGFFFMTVFMFALAIPYKHWTLEANRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFQYAEKGLGVKKTLIILGVVNALGMFFTLLVPESKGKSLEEMSGEAGDEAESKPESRTQSDHRTMPV 595
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4646408 4650925 - CrPI670011_05g005240.1 Cre05g0524 497037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre05g0524 595 Gene3D MFS general substrate transporter like domains 91 337 IPR036259 -
Cre05g0524 595 Gene3D MFS general substrate transporter like domains 342 588 IPR036259 -
Cre05g0524 595 ProSiteProfiles Major facilitator superfamily (MFS) profile. 94 564 IPR020846 GO:0022857(InterPro)
Cre05g0524 595 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 56 569 - -
Cre05g0524 595 MobiDBLite consensus disorder prediction 1 22 - -
Cre05g0524 595 NCBIfam phosphate:H+ symporter 93 573 IPR004738 GO:0005315(InterPro)|GO:0006817(InterPro)|GO:0016020(InterPro)
Cre05g0524 595 SUPERFAMILY MFS general substrate transporter 87 571 IPR036259 -
Cre05g0524 595 MobiDBLite consensus disorder prediction 568 595 - -
Cre05g0524 595 Pfam Sugar (and other) transporter 96 571 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cre05g0524 595 CDD MFS_PhT 95 563 - -
Cre05g0524 595 FunFam Inorganic phosphate transporter 1-6 90 585 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g0524 Cre-Chr5:4646408 Cre07g0482 Cre-Chr7:2643673 2.00E-218 dispersed
Cre05g0524 Cre-Chr5:4646408 Cre05g0525 Cre-Chr5:4662610 1.30E-217 tandem
Cre05g0524 Cre-Chr5:4646408 Cre06g1458 Cre-Chr6:9103398 1.00E-219 wgd
Cre05g0524 Cre-Chr5:4646408 Cre07g0464 Cre-Chr7:2409442 1.70E-214 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre05g0524 K08176 - csv:101209582 882.093