Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre05g0665 | ATGGGCAGGGCCCATGCCATGAGACTCGGCCTGCCTTGGCCGAAGTCAAGGCTGACCATAAGAAGCCTAATGGAGGGAGATCAAGCCTCGATTATCGGGGGAGTCATAGAGTTTATCAAGGAGTTGCATCAAGTTTTACAATCGTTGGAGTCCAACAAACGGAGGAGGAAGAGTATAAGCCCTAGCCCTGGTCCGAGTCCGAGGCCACCATCGATGGCGGGATCCGATAATGGCTCGCTTGGATTTGAAAATGGAGTTGATGTCGTCGGAGCGTGTTGCAATTCATCGGTTGCAGATGTCGAAGCAAAGATTTCGGGTTCAAACGTGGTTTTGAAGATCATTTCCCGACGGATTCCTGGTCAACTTTCGAAGATGATTGGTGTCTTCGAGAGGCTCTCCTTTGAGGTTCTTCATCTCAATATTAGTAGTATGGATGACACGATTCTGTACTCTTTTGTTGTCAAGATAGGGCTTGAATGTCAACTAAGTTTGGAGGAACTAGCTTATGAAGTTCAACAAAGCTTCTGCTCTCAAGTGTATTTATGCCAATGA | 552 | 46.92 | MGRAHAMRLGLPWPKSRLTIRSLMEGDQASIIGGVIEFIKELHQVLQSLESNKRRRKSISPSPGPSPRPPSMAGSDNGSLGFENGVDVVGACCNSSVADVEAKISGSNVVLKIISRRIPGQLSKMIGVFERLSFEVLHLNISSMDDTILYSFVVKIGLECQLSLEELAYEVQQSFCSQVYLCQ | 183 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 5849738 | 5853131 | + | CrPI670011_05g006650.1 | Cre05g0665 | 497178 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre05g0665 | 183 | PANTHER | TRANSCRIPTION FACTOR FAMA | 21 | 175 | IPR044283 | GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0010052(InterPro)|GO:0010374(PANTHER)|GO:0045893(PANTHER) | |
| Cre05g0665 | 183 | MobiDBLite | consensus disorder prediction | 50 | 77 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre05g0665 | Cre-Chr5:5849738 | Cre05g1058 | Cre-Chr5:9833800 | 8.00E-22 | dispersed | |
| Cre05g0665 | Cre-Chr5:5849738 | Cre08g1073 | Cre-Chr8:23834758 | 5.60E-15 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre05g0665 | - | - | - | 0.0 |