Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cre05g0665 ATGGGCAGGGCCCATGCCATGAGACTCGGCCTGCCTTGGCCGAAGTCAAGGCTGACCATAAGAAGCCTAATGGAGGGAGATCAAGCCTCGATTATCGGGGGAGTCATAGAGTTTATCAAGGAGTTGCATCAAGTTTTACAATCGTTGGAGTCCAACAAACGGAGGAGGAAGAGTATAAGCCCTAGCCCTGGTCCGAGTCCGAGGCCACCATCGATGGCGGGATCCGATAATGGCTCGCTTGGATTTGAAAATGGAGTTGATGTCGTCGGAGCGTGTTGCAATTCATCGGTTGCAGATGTCGAAGCAAAGATTTCGGGTTCAAACGTGGTTTTGAAGATCATTTCCCGACGGATTCCTGGTCAACTTTCGAAGATGATTGGTGTCTTCGAGAGGCTCTCCTTTGAGGTTCTTCATCTCAATATTAGTAGTATGGATGACACGATTCTGTACTCTTTTGTTGTCAAGATAGGGCTTGAATGTCAACTAAGTTTGGAGGAACTAGCTTATGAAGTTCAACAAAGCTTCTGCTCTCAAGTGTATTTATGCCAATGA 552 46.92 MGRAHAMRLGLPWPKSRLTIRSLMEGDQASIIGGVIEFIKELHQVLQSLESNKRRRKSISPSPGPSPRPPSMAGSDNGSLGFENGVDVVGACCNSSVADVEAKISGSNVVLKIISRRIPGQLSKMIGVFERLSFEVLHLNISSMDDTILYSFVVKIGLECQLSLEELAYEVQQSFCSQVYLCQ 183
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 5849738 5853131 + CrPI670011_05g006650.1 Cre05g0665 497178
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cre05g0665 183 PANTHER TRANSCRIPTION FACTOR FAMA 21 175 IPR044283 GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0010052(InterPro)|GO:0010374(PANTHER)|GO:0045893(PANTHER)
Cre05g0665 183 MobiDBLite consensus disorder prediction 50 77 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g0665 Cre-Chr5:5849738 Cre05g1058 Cre-Chr5:9833800 8.00E-22 dispersed
Cre05g0665 Cre-Chr5:5849738 Cre08g1073 Cre-Chr8:23834758 5.60E-15 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre05g0665 - - - 0.0