Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre05g0718 ATGGGTGGGTGTTTTCCTTGTTTTGGATCCTCCGATGAAGATGGTAATGGTGTGAAAGAAGCTACTAAGAAGGATTCAGCCAAGGATGGCTCCACCGCTCAGTCTCACCATGTTAGAAGAGTGAGCTCAGATAAATCGAAGTCACGGAGTGTATCTGATGCTAAGAAGGAGCCAACTGTTCAAAAGGATGGAACAACAGCACATATTGCTGCTCAAACATTTACATTCCGGGAGCTTGCTACAGCCACGAAGAACTTTAGATCAGAATGCTTGCTCGGAGAAGGGGGGTTTGGAAGGGTTTACAAAGGTCGCTTGGAGAGCACAGGACAGGTAGTGGCTGTGAAGCAGCTTGACCGTAATGGTCTTCAAGGAAATCGGGAATTTTTGGTGGAGGTTCTAATGCTTAGCCTGTTACATCACCCTAATCTTGTTAACTTGATAGGCTATTGTGCTGACGGGGATCAACGTCTTCTTGTTTATGAGTTCATGCCATTGGGTTCATTGGAAGATCATTTGCATGACCTTCCACCAGATAAGGAGCCCTTGGATTGGAATACGAGAATGAAGATTGCAGCTGGTGCTGCAAAAGGATTGGAATATTTGCATGACAAAGCAAACCCGCCTGTTATATATCGAGACTTGAAGTCGTCTAATATTCTTCTTGACGAGGGCTACCACCCCAAGCTGTCAGATTTCGGTCTTGCAAAACTGGGTCCAGTTGGTGACAAGACTCATGTCTCTACGAGAGTGATGGGAACATACGGTTACTGTGCTCCTGAGTATGCTATGACTGGCCAACTCACTCTCAAATCGGATGTATATAGTTTTGGAGTTGTCTTTCTGGAACTTATCACGGGGCGCAAGGCAATCGATAATACTAGAGGTCCGGGGGAGCATAATCTTGTGGCATGGGCTCGGCCACTTTTTAAAGATCGCCGGAAGTTCCCTAAGATGGCTGATCCACTACTGCAGGGTCGATATCCCATGCGGGGACTTTATCAGGCATTGGCAGTTGCAGCAATGTGCTTACAGGAACAGGCTGCAACAAGACCTCTAATTGGGGATGTTGTTACTGCTTTGACGTATTTAGCTTCCCAAACTTATGATCCTAATGCAGCTGCTTCTCAAAGCAATCGAATGGGTGGATCTACTCCACGAGCCCGAGATGAGCGGAGAGGTTTTCCAGATGGACTGGATAGCCCTGATGAGCGTGGACGAGGACGTGGTTCCCCATCGAACTACAGAAACTCACCTGATTACCGAAAGAAAGACCTCCATAGGGAAATGAATTGTGGAGGTACAGAGCTGAGCAAAATCGACACTGGAGGCGGATCTGGTCGAAAATGGGGATTGGATGAGCTAGAGCGACAAGAATCTCTGCGAGACAGTCCTGTATATACTGGGAGAGCAAGGGAAACACCGAGGAACCGCGACCTAAACAGAGAACGTGCAGTTGCAGAAGCAAAAGAAATGAAGTTGCCAGTGCCTACTAGACTACGGGTAAAAATTGCAGGAAGAAGAGGAAGGAAAGATTCAGATTACAAAACTACAGCATTTATCTTTCCTCGATTCAAGTCGGTGCCGTCGCCGGTAGTTGAACGTGTCGATCATCGGCAGAACCGCCAAATTGCCGGGCTGCTTTTCTCCTTTTCCAAATTGTTGACAGTGGCGATTTTTGCTTGCCTGATCGCTTTTTCCGTCGGAAGGGAGTTCAGATTGAACCACAAGCACAGTGGTGATGATATTTCCTTTAACCATACTCTTGCCGAAATCTTGGTGGAGTATGCTTCTGCGGCATACATATCTGATTTAACGGAACTGTTTACTTGGACATGCACAAGATGCGATGACCTGACTCAGGGTTTTGAAGTTATAGAACTGGTTGTTGATGTCCAGCACTGTCTACAGGCATATGTTGGAGTAGCAAAGAGTCTTAATGCTGTCATTATTGCTTTTAGAGGAACTCAAGAAAACAGCGTACAGAACTGGATTGAAGACCTATACTGGAAGCAGCTTGACCTGATGTACCCTGGCATGCCAGATGCAATGGTGCACCATGGGTTTTATTATGCTTATCACAATACAACAATACGCCCTGCAATATTAAGTGCTGTTGATAGAGCCAGGAAGTTCTATGGTAACCTTGACATCATGGTGACTGGACATTCAATGGGAGGGGCAATGGCAGCATTTTGTGGCCTTGATCTTGCAGTTAACTACAATTCCCAGAATGTCCAGGTTATGACATTTGGACAACCTCGTATTGGCAATGCAGTATTTGCATCTTACTATAGCAATATAGTGCCAAATACGTTTCGGGTTACGAATGGAAATGATGTCGTCCCCCATTTGCCTCCATTTTATGCTTATTTTCCTAAAAAGACATATCACCATTTTCCTAGAGAGGTTTGGCTTTATAACGTTGGATTCGGAAGTTTTGTTTATCAAGTTGAAAAGGTTTGTGATGATTCTGGTGAAGACCCATCTTGTAGCAGGTCTGTCTCAGGGAAAAGTATTTCAGATCATTTGGTGTACTATGGTGTTGAGTTAAGTAGTCCAGCATGGAGATCATGTAGATTTGTAATGGATCCTCCTCTGGCGGCATACGGAGCAACAGATCTGAACGGAAACCGAGTTTTCTCTAGGGATCCTGGAATTCCTCTTATCAGACTGAAGAAACAATCGGGAACAGCCAAAGTTTTCAAAGATTTAGGGGCTTTTTAG 2724 45.23 MGGCFPCFGSSDEDGNGVKEATKKDSAKDGSTAQSHHVRRVSSDKSKSRSVSDAKKEPTVQKDGTTAHIAAQTFTFRELATATKNFRSECLLGEGGFGRVYKGRLESTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLDEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNTRGPGEHNLVAWARPLFKDRRKFPKMADPLLQGRYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQTYDPNAAASQSNRMGGSTPRARDERRGFPDGLDSPDERGRGRGSPSNYRNSPDYRKKDLHREMNCGGTELSKIDTGGGSGRKWGLDELERQESLRDSPVYTGRARETPRNRDLNRERAVAEAKEMKLPVPTRLRVKIAGRRGRKDSDYKTTAFIFPRFKSVPSPVVERVDHRQNRQIAGLLFSFSKLLTVAIFACLIAFSVGREFRLNHKHSGDDISFNHTLAEILVEYASAAYISDLTELFTWTCTRCDDLTQGFEVIELVVDVQHCLQAYVGVAKSLNAVIIAFRGTQENSVQNWIEDLYWKQLDLMYPGMPDAMVHHGFYYAYHNTTIRPAILSAVDRARKFYGNLDIMVTGHSMGGAMAAFCGLDLAVNYNSQNVQVMTFGQPRIGNAVFASYYSNIVPNTFRVTNGNDVVPHLPPFYAYFPKKTYHHFPREVWLYNVGFGSFVYQVEKVCDDSGEDPSCSRSVSGKSISDHLVYYGVELSSPAWRSCRFVMDPPLAAYGATDLNGNRVFSRDPGIPLIRLKKQSGTAKVFKDLGAF 907
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 6341480 6352907 - CrPI670011_05g007180.1 Cre05g0718 497231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre05g0718 907 MobiDBLite consensus disorder prediction 417 433 - -
Cre05g0718 907 SUPERFAMILY Protein kinase-like (PK-like) 68 360 IPR011009 -
Cre05g0718 907 ProSitePatterns Protein kinases ATP-binding region signature. 92 115 IPR017441 GO:0005524(InterPro)
Cre05g0718 907 SUPERFAMILY alpha/beta-Hydrolases 585 849 IPR029058 -
Cre05g0718 907 ProSiteProfiles Protein kinase domain profile. 86 363 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre05g0718 907 PANTHER OS07G0668900 PROTEIN 35 379 - -
Cre05g0718 907 Pfam Protein kinase domain 90 297 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre05g0718 907 FunFam Serine/threonine-protein kinase PBS1 163 378 - -
Cre05g0718 907 Pfam Lipase (class 3) 649 787 IPR002921 GO:0006629(InterPro)
Cre05g0718 907 SMART serkin_6 86 363 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre05g0718 907 MobiDBLite consensus disorder prediction 1 64 - -
Cre05g0718 907 MobiDBLite consensus disorder prediction 372 456 - -
Cre05g0718 907 Gene3D Phosphorylase Kinase; domain 1 56 162 - -
Cre05g0718 907 MobiDBLite consensus disorder prediction 16 62 - -
Cre05g0718 907 Gene3D Transferase(Phosphotransferase) domain 1 163 381 - -
Cre05g0718 907 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre05g0718 907 Gene3D alpha/beta hydrolase 585 853 IPR029058 -
Cre05g0718 907 CDD Lipase_3 585 805 - -
Cre05g0718 907 MobiDBLite consensus disorder prediction 384 409 - -
Cre05g0718 907 FunFam Serine/threonine-protein kinase PBS1 59 162 - -
Cre05g0718 907 CDD STKc_IRAK 92 361 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g1692 Cre-Chr2:29975035 Cre05g0718 Cre-Chr5:6341480 2.40E-161 dispersed
Cre02g2377 Cre-Chr2:37166934 Cre05g0718 Cre-Chr5:6341480 1.90E-131 dispersed
Cre05g0718 Cre-Chr5:6341480 Cre10g2179 Cre-Chr10:36331013 2.20E-149 dispersed
Cre07g1781 Cre-Chr7:33268482 Cre05g0718 Cre-Chr5:6341480 1.60E-07 dispersed
Cre03g1402 Cre-Chr3:26290462 Cre05g0718 Cre-Chr5:6341480 5.50E-122 transposed
Cre06g0954 Cre-Chr6:3014227 Cre05g0718 Cre-Chr5:6341480 7.00E-171 transposed
Cre06g1297 Cre-Chr6:6884159 Cre05g0718 Cre-Chr5:6341480 8.60E-121 transposed
Cre09g1021 Cre-Chr9:10465024 Cre05g0718 Cre-Chr5:6341480 2.30E-130 transposed
Cre10g0763 Cre-Chr10:7436416 Cre05g0718 Cre-Chr5:6341480 1.20E-138 transposed
Cre03g1947 Cre-Chr3:36529118 Cre05g0718 Cre-Chr5:6341480 1.40E-80 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64128 PF00069 Pkinase 2.70E-45 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre05g0718 - - - 0.0