Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre05g0741 ATGCATAATACTTCTTCTTCAATTCATCCCCATTTCCTTCAATTCCCTCCTCACCACCGCCTCTGTCATATAGTATGCTTCAAGAAGCTTCAACAAAACCTGAGGGAGAACTTGAAGTTAGCTTTGGTTATAAATGCAATGCCTGGACTTCCAAGGATCAGCAGTTTCTCTTGCTTATCTGGTGCTGCATTGAGTGCTAATGCTACCCTAGCGAACACAAATATATGCAATGGGTTGATAGGAGAAGAAATTCTGCCGACCTGGGACTCTCCTAACTCCTTCCGTAAGGTTCCCTCATCACCTACTCTTTCAAGGTTGGATATATTGTCAACGTCTCTGCAGAGTAGTCTTTCAAACTTAAGTTGCAGTCCATCTACCCCAACGTCTGAATATGATTCATACTTGTTGAAATCCATGAGTGCTCCATCCGGAAGTGAAGGTTTCCTTAATGTTAAGGAAGTGCAAGTGGCAGGTGGAGCTGCCGGTGAGGACAGGGTTCAAGCTGTTTGTTCTGAAGAAAATGGATGGCTATTTTGTGCAATTTATGATGGTTTTAATGGAAGAGATGCAGCTGATTTTCTTGCTGGCACATTGTACGAAACCATTGTATTTCATTTTAACCTACTAGATTGGGAAGCTAAGAATGAAACCTCCGACCATATGGATATGGATAATTCACATCTTCTTGATGATAGTAGCATTACTCAAGGAAGATTTTCTCCTTTTGGAAACAATAGTAAAATTGCTTCAGATATCCCCAATTTATTAGAGAACCATTCATATTCCAAAGCAGGAATGACAAACTGTTCTCTAAGGCATGGGGTGTTCGATAGCCTCCAGCGTGCGCTTAGTCAAACAGAGAATGATTTTCTGCACATGGTTGAACAGGAAATGGAGGATCGTCCTGATTTAGTTTCTGTTGGGTCATGTGTTTTAGTTGTTCTTCTTCATGGAAAGGATTTGTACACGCTAAATTTGGGTGATAGTAGAGCAGTACTAGCTACCCTTGATGAGGGTGCTATGAGAGGGAATGGGGGACTGAAAGCTGTCCAGCTCACTGAGAGTCACACTGTGGATAATGAACTTGAAAGAGCACAGTTACAACATGATCATCCTGATGATCCGGCAATCATAGTTGGTGGGAAAGTCAAAGGAAAACTGAAGGTGACTCGTGCATTTGGAGTTGGCTACTTGAAGACGAAAAAATTTAATGATGCTTTGATGGGTATTCTTCGAGTCCGTAACCTAATAAGCCCTCCCTATATTTCCACTCAACCGGCATTGTCTATCCATAGGATATCAAAATCAGATTGCTTTGTTATAGTTGGAAGTGATGGTTTATTTGACTTTTTTGGCAATGAGGAGGCAGTGAACCTTGTCCATTCATATATCTTGAGCAACCCAACTGGCGATCCTGCAAAATTTTTACTGGAGCAGCTCCTATTGAAAGCAGCTGATTGCGCAGGTTTTAGCAAGGAAGAATTAATTACCATTCCAGCCGGCAGGAGAAGGAAATATCATGATGATGTAACTGTTATTGTAATCATCCTTGGAACAAATCAGCGCACCACAAGGGCATCTACTAGCATGTAA 1593 41.56 MHNTSSSIHPHFLQFPPHHRLCHIVCFKKLQQNLRENLKLALVINAMPGLPRISSFSCLSGAALSANATLANTNICNGLIGEEILPTWDSPNSFRKVPSSPTLSRLDILSTSLQSSLSNLSCSPSTPTSEYDSYLLKSMSAPSGSEGFLNVKEVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYETIVFHFNLLDWEAKNETSDHMDMDNSHLLDDSSITQGRFSPFGNNSKIASDIPNLLENHSYSKAGMTNCSLRHGVFDSLQRALSQTENDFLHMVEQEMEDRPDLVSVGSCVLVVLLHGKDLYTLNLGDSRAVLATLDEGAMRGNGGLKAVQLTESHTVDNELERAQLQHDHPDDPAIIVGGKVKGKLKVTRAFGVGYLKTKKFNDALMGILRVRNLISPPYISTQPALSIHRISKSDCFVIVGSDGLFDFFGNEEAVNLVHSYILSNPTGDPAKFLLEQLLLKAADCAGFSKEELITIPAGRRRKYHDDVTVIVIILGTNQRTTRASTSM 530
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 6587051 6591570 - CrPI670011_05g007410.1 Cre05g0741 497254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre05g0741 530 ProSiteProfiles PPM-type phosphatase domain profile. 148 517 IPR001932 -
Cre05g0741 530 Gene3D - 128 526 IPR036457 -
Cre05g0741 530 Pfam Protein phosphatase 2C 281 468 IPR001932 -
Cre05g0741 530 CDD PP2Cc 161 517 IPR001932 -
Cre05g0741 530 SMART PP2C_4 139 515 IPR001932 -
Cre05g0741 530 PANTHER PROTEIN PHOSPHATASE 2C 157 515 IPR015655 GO:0004722(InterPro)|GO:0006470(PANTHER)|GO:0006470(InterPro)
Cre05g0741 530 SUPERFAMILY PP2C-like 162 518 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g2322 Cre-Chr2:36713279 Cre05g0741 Cre-Chr5:6587051 1.90E-63 dispersed
Cre05g0741 Cre-Chr5:6587051 Cre10g0436 Cre-Chr10:3246203 8.20E-59 dispersed
Cre05g0741 Cre-Chr5:6587051 Cre04g0912 Cre-Chr4:27800486 1.10E-63 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre05g0741 - - - 0.0