Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre05g0810 ATGGCGTCGTCTCTGATTCTGAATCCTGTGGCGACTTCTGAGCGATCGCGTGATTCATCCAGAAAGAAGAAGAAGAAGAAAGCAACAAGGGAAGATGATCGTCAAGATCAAGATCACATCAAATGGAAATCACAAGCTCAGCATCAAGTTTACTCTTCGAAGCTGTTGCGCGCCTTGAGTCAGGTCAGGATCAGTTCTCCTGAATCGACACCAAACGAAACGCCGCGCCGTGGCCGAGCGGTGCGGGAGGCTTCCGATACGGTTCTAGCCTTGACGGCAAAAGGAAGAAGTAGGTGGAGCAGAGCAATCTTAACGAACCGTCTCAAGCTCAAGTTTCGTAATAAGCACAATCGGCAGAAGGCGCGTGTGACCGGAAACAGCCGCACGAAGAAACCTAGTGTTAGCGTTTTGCGGTTTAGAGGGAAGGGATCACCAACTGTACAGAGAAAAGTCCGGCTTCTCGGCCGACTAGTTCCCGGCTGCCGGAAACAACCGCTGCCGGTGATTCTGGATGAAGTAACCGATTACATTCCGGCACTGGAGATGCAGATCCGTGTCATGAACGCCATAGTCAACTTGGTTTCAAGCTCTTCTTCATCTTCTTCTGGTATCGATTCTTCTACCTGA 627 50.4 MASSLILNPVATSERSRDSSRKKKKKKATREDDRQDQDHIKWKSQAQHQVYSSKLLRALSQVRISSPESTPNETPRRGRAVREASDTVLALTAKGRSRWSRAILTNRLKLKFRNKHNRQKARVTGNSRTKKPSVSVLRFRGKGSPTVQRKVRLLGRLVPGCRKQPLPVILDEVTDYIPALEMQIRVMNAIVNLVSSSSSSSSGIDSST 208
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 7164530 7165156 + CrPI670011_05g008100.1 Cre05g0810 497323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre05g0810 208 MobiDBLite consensus disorder prediction 62 83 - -
Cre05g0810 208 MobiDBLite consensus disorder prediction 25 43 - -
Cre05g0810 208 CDD bHLH_AtIBH1_like 136 191 IPR044549 GO:0006355(InterPro)
Cre05g0810 208 MobiDBLite consensus disorder prediction 1 46 - -
Cre05g0810 208 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 39 194 IPR044660 GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g1804 Cre-Chr2:31361496 Cre05g0810 Cre-Chr5:7164530 4.00E-27 dispersed
Cre05g0810 Cre-Chr5:7164530 Cre06g1207 Cre-Chr6:5951453 5.70E-56 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre05g0810 - - - 0.0