Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre05g0810 | ATGGCGTCGTCTCTGATTCTGAATCCTGTGGCGACTTCTGAGCGATCGCGTGATTCATCCAGAAAGAAGAAGAAGAAGAAAGCAACAAGGGAAGATGATCGTCAAGATCAAGATCACATCAAATGGAAATCACAAGCTCAGCATCAAGTTTACTCTTCGAAGCTGTTGCGCGCCTTGAGTCAGGTCAGGATCAGTTCTCCTGAATCGACACCAAACGAAACGCCGCGCCGTGGCCGAGCGGTGCGGGAGGCTTCCGATACGGTTCTAGCCTTGACGGCAAAAGGAAGAAGTAGGTGGAGCAGAGCAATCTTAACGAACCGTCTCAAGCTCAAGTTTCGTAATAAGCACAATCGGCAGAAGGCGCGTGTGACCGGAAACAGCCGCACGAAGAAACCTAGTGTTAGCGTTTTGCGGTTTAGAGGGAAGGGATCACCAACTGTACAGAGAAAAGTCCGGCTTCTCGGCCGACTAGTTCCCGGCTGCCGGAAACAACCGCTGCCGGTGATTCTGGATGAAGTAACCGATTACATTCCGGCACTGGAGATGCAGATCCGTGTCATGAACGCCATAGTCAACTTGGTTTCAAGCTCTTCTTCATCTTCTTCTGGTATCGATTCTTCTACCTGA | 627 | 50.4 | MASSLILNPVATSERSRDSSRKKKKKKATREDDRQDQDHIKWKSQAQHQVYSSKLLRALSQVRISSPESTPNETPRRGRAVREASDTVLALTAKGRSRWSRAILTNRLKLKFRNKHNRQKARVTGNSRTKKPSVSVLRFRGKGSPTVQRKVRLLGRLVPGCRKQPLPVILDEVTDYIPALEMQIRVMNAIVNLVSSSSSSSSGIDSST | 208 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 7164530 | 7165156 | + | CrPI670011_05g008100.1 | Cre05g0810 | 497323 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre05g0810 | 208 | MobiDBLite | consensus disorder prediction | 62 | 83 | - | - | |
Cre05g0810 | 208 | MobiDBLite | consensus disorder prediction | 25 | 43 | - | - | |
Cre05g0810 | 208 | CDD | bHLH_AtIBH1_like | 136 | 191 | IPR044549 | GO:0006355(InterPro) | |
Cre05g0810 | 208 | MobiDBLite | consensus disorder prediction | 1 | 46 | - | - | |
Cre05g0810 | 208 | PANTHER | TRANSCRIPTION FACTOR IBH1-LIKE 1 | 39 | 194 | IPR044660 | GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre02g1804 | Cre-Chr2:31361496 | Cre05g0810 | Cre-Chr5:7164530 | 4.00E-27 | dispersed | |
Cre05g0810 | Cre-Chr5:7164530 | Cre06g1207 | Cre-Chr6:5951453 | 5.70E-56 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre05g0810 | - | - | - | 0.0 |