Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre05g0933 ATGGGTTTTCGGTTCCTTATGGCAAGAAGAGGAGGAGCAATTGGATCGTGGCTCTGCATCGTTGTGGTTTTAATTTCGGCGCAAATTCACGTCACAGCCAGATCGGATAAGGAAATTAGGGAGAGATTTTATGGAAACTTGATAAACTCGACGGCTCCGACTTCCGGTGACGGTAGCATTGCCCAAATGTTCGATAAGGTTCTTGAGAAGGAGTTCTCTGACAATGATCTGCCTGAAGGTTCTGGTGGAAGCAGCTTTAATAGCAGCGTTGCTGATCAGGAGGCAGAACTGGAGACGGTAGCTAAAATCACACATGAGAAGGGCAAGAAAAATGATAGTCAAAAGGCAAATGGGACAAGGGCATTCCAATTTCAGGATGTTTTTTCTCTGGAAAATGAAGAATCTGATGATGTTACAACGTTGATTGATAAAAAAGACAATGTATTTGTGATGTCAAACAAGAAGTCAAAGTATCCAGTACTTCAAGTAGATTTGAGATTGATCTCAGACTTGGTGGTGGTTATTGTTTCTGCCGCAATTGGAGGAATTATCTTTTCTTGTTTAGGGCAACCTGTTATTGTGGGCTATCTTCTTGCGGGGTCAATCATCGGACCAGGAGGTCTAAAATTCATCAGTGAAATGGTGCAGGTTGAGACAGTGGCACAGTTTGGTGTTGTATTTCTTCTTTTTGCTTTAGGACTGGAGTTTTCTTTGACAAAGTTAAAAGTTGTGGGAGCTGTGGCTGTTTTTGGAGGTTTTCTACAGATCATCATATTTATGTTCTTGTGTGGTATCATTGCCATGTTAAGTGGAGCTAAACTGTCGGAGGGTGTATTTGTTGGTTCATTTCTATCAATGTCATCTACAGCAGTGGTGGTGAAGTTCTTGGTAGAACGGAATAGCAGTAATACTCTTCATGGTCAAGTTACTATTGGAACGCTCATCTTACAGGATTGCGCTGTTGGTTTGTTGTTTGCCTTGCTCCCAGTTTTGGGTGGTCACAATGGTCTTATTTTAGGAATGATATCTATGGGAAAGTTGCTACTGGTGTTGTCAGTATATCTCACAGCCGCATCTATTTTGTCATGGTCATTTGTTCCCCGCTTTCTTAAGCTGATGATGCAGCTGTCGTCTCAAACAAATGAGTTGTATCAGCTTGCTGCTGTGGCATTTTGCTTGCTGTCTGCTTGGTGCAGTGATAAGCTGGGCCTCAGTCTTGAGTTGGGTTCCTTTGTAGCTGGAGTTATGATATCTACCACTGACTTCGGTCAGCATACTTTAGATCAGGTGGAACCAATCCGCAATTTATTTGCAGCTTTGTTCCTTTCAAGTATTGGAATGCTCATTCATGTACATTTTCTGTGGAGCCATTTGGACATTTTGCTAGCATCTGTAATGCTGGTTGTGTTTGTCAAGACAGCAGTTGCTACCGTTGTTGCAAAGGCATTTGGATACAGTATTAGGACTTCTTTTCAGGTTGGGGTCATGCTTGCTCAAATTGGAGAATTTGCTTTTGTTCTCCTAAGCCGTGCTTCAAATCTTCATCTCATTGGGGGGAAAGTTTATTTACTTCTTCTTGGAACAACGGCACTTAGTCTGGTGACCACCCCTCTTCTGTTCAAATTGATACCTGCTGTGTTAAATTTAGGGGTTCTCATGCATTGGTTCCCCTCTGAAAACAACATACAAAATGAGTATAGTCGTCTCCCCTCCTCTGAAAGGTTTGTGAATATCAGAGCCGATTTCTCAGCCTTAATCGATTTTGGTTTTGGAGATTCTTTACTAGGTTGCTTTAGTTTCACCATTGATTCAGCTAGGCAACCTCATGGTCATCTGCCAAATCCATACCGCAAATTGAAAGCTCCACCACTCCCTCCACCTCCCCCCTCCGACGCCGGTCGTTCACATGCATCTCCGGTGAACCAGAAACCACCTGGAGCTCGAACTCAGATTCGTAATTCCCGATATCGAACCTGA 1977 42.99 MGFRFLMARRGGAIGSWLCIVVVLISAQIHVTARSDKEIRERFYGNLINSTAPTSGDGSIAQMFDKVLEKEFSDNDLPEGSGGSSFNSSVADQEAELETVAKITHEKGKKNDSQKANGTRAFQFQDVFSLENEESDDVTTLIDKKDNVFVMSNKKSKYPVLQVDLRLISDLVVVIVSAAIGGIIFSCLGQPVIVGYLLAGSIIGPGGLKFISEMVQVETVAQFGVVFLLFALGLEFSLTKLKVVGAVAVFGGFLQIIIFMFLCGIIAMLSGAKLSEGVFVGSFLSMSSTAVVVKFLVERNSSNTLHGQVTIGTLILQDCAVGLLFALLPVLGGHNGLILGMISMGKLLLVLSVYLTAASILSWSFVPRFLKLMMQLSSQTNELYQLAAVAFCLLSAWCSDKLGLSLELGSFVAGVMISTTDFGQHTLDQVEPIRNLFAALFLSSIGMLIHVHFLWSHLDILLASVMLVVFVKTAVATVVAKAFGYSIRTSFQVGVMLAQIGEFAFVLLSRASNLHLIGGKVYLLLLGTTALSLVTTPLLFKLIPAVLNLGVLMHWFPSENNIQNEYSRLPSSERFVNIRADFSALIDFGFGDSLLGCFSFTIDSARQPHGHLPNPYRKLKAPPLPPPPPSDAGRSHASPVNQKPPGARTQIRNSRYRT 658
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 8505756 8516343 - CrPI670011_05g009330.1 Cre05g0933 497446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre05g0933 658 Gene3D - 165 548 IPR038770 -
Cre05g0933 658 MobiDBLite consensus disorder prediction 618 633 - -
Cre05g0933 658 MobiDBLite consensus disorder prediction 611 658 - -
Cre05g0933 658 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 18 567 IPR045158 GO:0015386(InterPro)|GO:0071805(InterPro)|GO:1902600(InterPro)
Cre05g0933 658 Pfam Sodium/hydrogen exchanger family 175 541 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g1838 Cre-Chr3:35294217 Cre05g0933 Cre-Chr5:8505756 8.20E-185 dispersed
Cre05g0250 Cre-Chr5:2380133 Cre05g0933 Cre-Chr5:8505756 1.80E-37 dispersed
Cre05g0933 Cre-Chr5:8505756 Cre08g1640 Cre-Chr8:28909566 2.40E-185 dispersed
Cre05g0930 Cre-Chr5:8496854 Cre05g0933 Cre-Chr5:8505756 1.40E-07 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre05g0933 K26735 - csv:101207607 1016.14