Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre05g0942 ATGGCTAATACTTCTCTCAAATGGCTCTGTTTATTGCTGTTTTTTCACTGTTTGATTCTTTCAACCTCTCAGCTTCTGAAAACTTATGTTGTTCAAATGGATAAGACTGCAATGCCGGACTCATTTACGGATCATCTTGACTGGTACTCCACAGTGCTAAGCAATGTGGTTGTTAATCTTGAAAGAGAAGGTAATGGGGGAGGAGGTGAAGAGAGGATTATTTACAGTTACCAGAATGTTTTCCATGGAGTTGCAGCTCGATTGAGTGAAGAAGAGGCTGAGAAGCTCGAGGAAGAGGATGGGGTATTGGCCATTTTTCCTGAGACGAAGTATGAGCTTCATACTACCAGAAGCCCCAAATTTCTTGGGCTTGAACCAGCTGATAGCAATAGCGCCTGGTCTCAGCAAGTTGCAGACCATGATGTGATTGTTGGAGTTTTGGACACTGGGATTTGGCCGGAGAGTGAGAGCTTCAACGACGTCGGAATGTCGCCGGTGCCGACGCATTGGAAAGGGGAATGTGAAACAGGGCGAGGGTTCACGAAACAGAATTGTAATAGAAAGATCGTTGGGGCCAGAGTGTTCTACCATGGGTATCAAGCTGCAACTGGGAAATTTAACGAGCAGTTGGAGTACAAATCGCCGAGGGATCAAGATGGGCATGGAACTCATACGGCAGCCACTGTCGCTGGCTCTCCAGTGCCCGGCGCGAGCCTCCTTGGTTATGCATATGGAACGGCCAGAGGAATGGCGCCCGGAGCAAGAATTGCGGCTTACAAAGTTTGTTGGGTTGGTGGCTGTTTTAGCTCCGACATTTTGTCGGCTGTTGACAGAGCTGTGGCCGACGGAGTGAATGTTCTGTCCATCTCTTTGGGAGGTGGGGTCTCTTCTTACTATCGCGATAGTCTCTCCGTTGCAGCATTTGGAGCAATGGAGATGGGCGTGTTTGTCTCCTGCTCGGCCGGAAATGGAGGGCCAGACCCTGTCAGTCTCACAAATGTATCACCATGGATAACCACCGTTGGCGCTAGCACAATGGACAGAGATTTCCCGGCCATTGTCAAGCTTGGTAATGGCAGAACAGTCACCGGTGTTTCACTTTACAGAGGAAGAATCACAATTCCAGAAAACAAGCGATTCCCAGTTGTATACATGGGGAGTAACTCGAGCAGTCCTGATCCGAGCTCCCTGTGTTTAGAAGGAACTTTAGATCCTCATTTCGTGGCCGGAAAAATTGTGATATGCGATCGCGGAATTAGCCCTCGGGTTCAGAAGGGTGTGGTGGTGAAAAATGCAGGTGGGGTTGGGATGATTCTGTCTAACACGGCGGCGAATGGGGAAGAACTTGTTGCCGACTGCCATTTGGTACCGGCAGTTGCCGTCGGGGAAAGAGAAGGCAAAGCAATTAAGCAGTACGCATTAACGAATCGAAAAGCGACGGCGACTTTAGGGTTTTTAGGGACAAGATTGGGGGTAAAACCTTCGCCGGTGGTGGCGGCGTTTTCATCCAGAGGACCAAATTTCCTCACACTGGAGATCCTCAAGCCCGATCTGGTGGCTCCTGGCGTTAACATCCTCGCCGCTTGGACCGGAAAAACAGGGCCGTCGAGCTTGACGACGGATACAAGAAGGGTAAAATTCAACATTCTTTCAGGAACTTCAATGTCTTGCCCTCACGTCAGTGGCGTAGCGGCTCTGATCAAATCGAAGCATCCCGATTGGAGCCCGTCGGCGATCAAATCGGCACTAATGACCACCGCTTACGTCCACGACAACACCTATAAACCTCTCAAAGACTCCTCCGCTGCATCACCGTCAAGTCCGTACGACCATGGCGCCGGCCACATAAACCCTAGAAAAGCCCTCGATCCTGGTTTGGTTTACGAAATTCAGCCGCAAGATTACTTCGACTTCCTCTGTACGCAGGATTTAACCCCTACACAGCTTAAAGTGTTCTCCAAATATTCGAACAGATCATGCAATCTTCTCCCCAACCCTGGAGACTTGAATTATCCGGCCATCTCCGCTGTTTTTCCTGAGAAAACCTCCGTCACTTCCCTGACCCTTCACAGAATCGTCACCAACGTCGGCCCTGCAACCTGCAGTTATCGTGCAGTGGTGACTCCGTTCAACGGCGCCGCCGTGAAAGTTGAGCCGGAGAGTCTGAACTTCACAAGAAGGTATGAGAAGCTTTCTTACAGAATCACATTTCTGACGAAGAAGAGACAGAGTATCCCGGAATTTGGAGGGCTAATTTGGAAGGATGGAACTCATAAAGTGAGAAGCCCCATTGTGATCACTTGGTTGTCGTTTGTTTGA 2319 49.63 MANTSLKWLCLLLFFHCLILSTSQLLKTYVVQMDKTAMPDSFTDHLDWYSTVLSNVVVNLEREGNGGGGEERIIYSYQNVFHGVAARLSEEEAEKLEEEDGVLAIFPETKYELHTTRSPKFLGLEPADSNSAWSQQVADHDVIVGVLDTGIWPESESFNDVGMSPVPTHWKGECETGRGFTKQNCNRKIVGARVFYHGYQAATGKFNEQLEYKSPRDQDGHGTHTAATVAGSPVPGASLLGYAYGTARGMAPGARIAAYKVCWVGGCFSSDILSAVDRAVADGVNVLSISLGGGVSSYYRDSLSVAAFGAMEMGVFVSCSAGNGGPDPVSLTNVSPWITTVGASTMDRDFPAIVKLGNGRTVTGVSLYRGRITIPENKRFPVVYMGSNSSSPDPSSLCLEGTLDPHFVAGKIVICDRGISPRVQKGVVVKNAGGVGMILSNTAANGEELVADCHLVPAVAVGEREGKAIKQYALTNRKATATLGFLGTRLGVKPSPVVAAFSSRGPNFLTLEILKPDLVAPGVNILAAWTGKTGPSSLTTDTRRVKFNILSGTSMSCPHVSGVAALIKSKHPDWSPSAIKSALMTTAYVHDNTYKPLKDSSAASPSSPYDHGAGHINPRKALDPGLVYEIQPQDYFDFLCTQDLTPTQLKVFSKYSNRSCNLLPNPGDLNYPAISAVFPEKTSVTSLTLHRIVTNVGPATCSYRAVVTPFNGAAVKVEPESLNFTRRYEKLSYRITFLTKKRQSIPEFGGLIWKDGTHKVRSPIVITWLSFV 772
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 8604731 8607049 + CrPI670011_05g009420.1 Cre05g0942 497455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre05g0942 772 CDD PA_subtilisin_like 354 483 - -
Cre05g0942 772 FunFam Subtilisin-like protease SBT1.5 141 363 - -
Cre05g0942 772 FunFam subtilisin-like protease SBT1.5 347 490 - -
Cre05g0942 772 Gene3D Peptidase S8/S53 domain 141 635 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cre05g0942 772 Pfam Fibronectin type-III domain 668 766 IPR041469 -
Cre05g0942 772 Pfam Subtilase family 140 595 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cre05g0942 772 ProSitePatterns Serine proteases, subtilase family, serine active site. 552 562 IPR023828 -
Cre05g0942 772 Gene3D - 639 769 - -
Cre05g0942 772 FunFam Subtilisin-like protease SBT1.9 17 114 - -
Cre05g0942 772 SUPERFAMILY Subtilisin-like 113 626 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cre05g0942 772 CDD Peptidases_S8_3 111 588 IPR034197 -
Cre05g0942 772 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 114 IPR037045 -
Cre05g0942 772 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 765 IPR045051 -
Cre05g0942 772 Pfam PA domain 381 469 IPR003137 -
Cre05g0942 772 Gene3D - 347 491 - -
Cre05g0942 772 PRINTS Subtilisin serine protease family (S8) signature 551 567 IPR015500 -
Cre05g0942 772 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Cre05g0942 772 PRINTS Subtilisin serine protease family (S8) signature 217 230 IPR015500 -
Cre05g0942 772 ProSiteProfiles Serine proteases, subtilase domain profile. 110 622 - -
Cre05g0942 772 Pfam Peptidase inhibitor I9 28 114 IPR010259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre04g1357 Cre-Chr4:32375499 Cre05g0942 Cre-Chr5:8604731 1.10E-229 dispersed
Cre05g0942 Cre-Chr5:8604731 Cre08g1580 Cre-Chr8:28349022 8.70E-219 dispersed
Cre04g2154 Cre-Chr4:38671285 Cre05g0942 Cre-Chr5:8604731 1.00E-85 transposed
Cre05g0942 Cre-Chr5:8604731 Cre09g2189 Cre-Chr9:40924359 6.60E-150 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre05g0942 - - - 0.0