Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre05g0943 ATGGGCCTCCACTTTTCGAGCACTTTTGACACGTGTCCTCGGGGGAAAATTCTCGCGATACGAGAAATTGACTGGAAAGAGAAAGGAATTAGGGAAAGGGATCGTCATGAGTACCACGTGTCCTCACAGCATGAAATAGAGCCAGAGATACTCCACGGCGCGTTCCTGCTTCGGACGATTCCGATGACGGAGGTTTACACTAGAATGCCAAGCGAAGATGATGAAGATTCGCCGGCCAAATGTCGAGAGCGCCGGCGCCGTAGAATAGAGATGAGACGGTTAGCAACAGTATCGTCGGCGAATCCCTCGCCCTCCACCACTCATCACCACCGGAAAGAGAATCAAACTGGAACCTCCGGTTTTGAGAAGAAGCGTGGTCGGAAGACGGACGGCGACGGTAATCCGGAGATTTCATCGTCTTCGTCATCGGGGGAGGAAGTGAAGACTGTAAGAGCTTCACCATCTGTACCTCAGCCGGTTTTCGGGATGATGTCGGTGTCCGGGAGGTCACGTGAGTTGGAGGATGCGGTATCAGTGAGCACGTGCGTTTTAGGTTCAGAAAATTTCCGACGGCAACTCGTGCATTTCTTCGCCGTCTACGATGGACATGGAGGCCCTCACGTGGCAGCGCTATGTAGGGAGAAGATGCACGTGTTCGTACAGGAGGAATTTTCGCGCGTGATGTGCACGCGCGAGGAAGGTGAGAGTGGCGGCGGTGGAAGCAGCGCGGGGGAGGAGGAGGAGGCGACTTGGAGAAGAGTGATGCAGCGGAGCTTTGAAAGAATGGACGAAATGGCACTCAGTACTTGTGCCTGTGGGAGCGTCGGAGGCCAGTGTGGGTGCCATCCGATGGAGGTGGCTCTCGGCGGCTCCACCGCCGTCGTCGCCGTGCTCACACCGGATCACATAATCGTCGCCAACTGCGGCGATTCACGCGCTGTCCTTTGCCGAGGAGGAAGGGCCATTCCGCTTTCTAATGATCACAAGCCTGATAGAAATGATGAACTAGCAAGGATTGAAGCAGCTGGAGGACGGGTGATTTTCGTAAATGGAGCTCGGGTTGAAGGAATCCTTGCAATGTCCCGGGCAATAGGAGACAAGTATCTCAAGTCAGTTGTAATATCAGAGCCTGAAATTACATTTACTAAAAGAGAATCAGATGATGAATGTTTAATACTTGCAAGTGATGGTTTGTGGGATGTTCTTTCAAGTGAATTGGCTTGTGAGGTAGCTCGTGAATGTCTCCAAGAAGGAGCAGCGGCTGCTGCGACTACAATAGACCTCAATGCCACACCTCAAATTGAAGAAGAAGGGGCTGGAACTTCATATCCCTCTCGGAGTGCATTGGCTGCTGCATTGCTTACTCGTCTTGCTTTAGGGCGGAAAAGCACGGACAACATCAGTGTCATAGTTATTGATCTGAAGAGGAGCTGA 1434 52.3 MGLHFSSTFDTCPRGKILAIREIDWKEKGIRERDRHEYHVSSQHEIEPEILHGAFLLRTIPMTEVYTRMPSEDDEDSPAKCRERRRRRIEMRRLATVSSANPSPSTTHHHRKENQTGTSGFEKKRGRKTDGDGNPEISSSSSSGEEVKTVRASPSVPQPVFGMMSVSGRSRELEDAVSVSTCVLGSENFRRQLVHFFAVYDGHGGPHVAALCREKMHVFVQEEFSRVMCTREEGESGGGGSSAGEEEEATWRRVMQRSFERMDEMALSTCACGSVGGQCGCHPMEVALGGSTAVVAVLTPDHIIVANCGDSRAVLCRGGRAIPLSNDHKPDRNDELARIEAAGGRVIFVNGARVEGILAMSRAIGDKYLKSVVISEPEITFTKRESDDECLILASDGLWDVLSSELACEVARECLQEGAAAAATTIDLNATPQIEEEGAGTSYPSRSALAAALLTRLALGRKSTDNISVIVIDLKRS 477
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 8617406 8623997 + CrPI670011_05g009430.1 Cre05g0943 497456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre05g0943 477 MobiDBLite consensus disorder prediction 90 156 - -
Cre05g0943 477 ProSitePatterns PPM-type phosphatase domain signature. 196 204 IPR000222 GO:0043169(InterPro)
Cre05g0943 477 ProSiteProfiles PPM-type phosphatase domain profile. 160 474 IPR001932 -
Cre05g0943 477 MobiDBLite consensus disorder prediction 106 132 - -
Cre05g0943 477 SUPERFAMILY PP2C-like 154 475 IPR036457 -
Cre05g0943 477 Gene3D - 153 477 IPR036457 -
Cre05g0943 477 FunFam Protein phosphatase 2C 50 158 477 - -
Cre05g0943 477 SMART PP2C_4 150 472 IPR001932 -
Cre05g0943 477 CDD PP2Cc 160 474 IPR001932 -
Cre05g0943 477 PANTHER PROTEIN PHOSPHATASE 115 473 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0005634(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cre05g0943 477 Pfam Protein phosphatase 2C 162 426 IPR001932 -
Cre05g0943 477 MobiDBLite consensus disorder prediction 133 149 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g0943 Cre-Chr5:8617406 Cre07g1746 Cre-Chr7:32925935 1.10E-62 dispersed
Cre05g0943 Cre-Chr5:8617406 Cre03g0435 Cre-Chr3:2773531 6.00E-77 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre05g0943 K14497 - csv:101206634 698.353