Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre05g0955 ATGGCAAAAAATGTATCACTCTTATTTCTAATGATGATGGTTTGTCTGTCGGAAGGAGTTCTTGATAGCCATTATTACTCAAAAACATGTCCCAGTGCAGAAAAAATCATCCTCCAAACCGTCTACAATGCTTCCATTAATGACCCCAAAGTCCCTGCTCGTCTTCTCAGGCTCTTCTTCCATGACTGTTTCATAAGGGGATGTGATGCATCAGTGTTGATAGACTCGACGCCAGAGAATCAGGCAGAGAAAGATGCACCTCCAAACATCTCGCTAAGGTCGTTCTATGTAATCGACGAGGCCAAAGCCAAGCTTGAAAGTGCATGCCCACATACTGTTTCTTGTGCTGATATTGTCGCCATTGCTGCTAGAGATGTAGTAACTTTGTCTGGAGGCCCGTATTGGAGTGTACTCAAAGGAAGGAAAGATGGGAAGATTTCCAAAGCTTCAGAGACCATCAACTTGCCAGCTCCAACTTTCAATGTGTCTCAACTCATCCAGAGCTTTGCCAACAGAGGATTAGAAGTTAAGGACTTGGTTGCTCTATCTGGGGCTCACACACTTGGATTCTCACACTGTTCTTCCTTTCAATCTAGACTTCGCAACTTCAGCTCCATTCATGAAATTGATCCTGCTTTGGAATCTGGGTTCGCCCAAATTCTAAGAAACAAATGTCCAAAACCAAATTTGGACAAAAATGCTGGACAGTTCTTGGACCCAACTTCCTCAACCTTTGACAATGTGTATTACAAGAGACTGTTGGAAGGAAAGGGTGTGTTTGGTTCAGATCAAGCGTTGTTTGCTGATTCTAGAACTAGAGGGCTTGTTGGATTGTTTGCTCAAGATCAGAACTTGTTCTTTAAGGAGTTCGCAACTTCAATGGTGAATTTGGGTAATGTTGGGACTCTCCCAATAGTTGTTGAAGAAGACAGGTCGAAGTGTTGTGTAAACCACAACTGGGCTTCTCATCTCATGGACACCATCTATCCAATTAGTCATAGTAAATTTGTGGTTGAGCTTATCGGACCAGCAGTGGAGGATTTCGATGTCTTTGGGCTTGTAATCCTTGCTGTGAAGGATTTCTCGTCCCAGCATTGTGGAGAATGA 1107 43.27 MAKNVSLLFLMMMVCLSEGVLDSHYYSKTCPSAEKIILQTVYNASINDPKVPARLLRLFFHDCFIRGCDASVLIDSTPENQAEKDAPPNISLRSFYVIDEAKAKLESACPHTVSCADIVAIAARDVVTLSGGPYWSVLKGRKDGKISKASETINLPAPTFNVSQLIQSFANRGLEVKDLVALSGAHTLGFSHCSSFQSRLRNFSSIHEIDPALESGFAQILRNKCPKPNLDKNAGQFLDPTSSTFDNVYYKRLLEGKGVFGSDQALFADSRTRGLVGLFAQDQNLFFKEFATSMVNLGNVGTLPIVVEEDRSKCCVNHNWASHLMDTIYPISHSKFVVELIGPAVEDFDVFGLVILAVKDFSSQHCGE 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 8816769 8818946 - CrPI670011_05g009550.1 Cre05g0955 497468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre05g0955 368 CDD secretory_peroxidase 21 316 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cre05g0955 368 ProSiteProfiles Plant heme peroxidase family profile. 20 318 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre05g0955 368 PANTHER PEROXIDASE 25-RELATED 14 303 IPR000823 GO:0004601(PANTHER)|GO:0004601(InterPro)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Cre05g0955 368 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre05g0955 368 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre05g0955 368 PRINTS Plant peroxidase signature 112 122 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre05g0955 368 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre05g0955 368 PRINTS Plant peroxidase signature 93 106 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre05g0955 368 PRINTS Plant peroxidase signature 177 189 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre05g0955 368 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre05g0955 368 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre05g0955 368 PRINTS Plant peroxidase signature 131 146 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre05g0955 368 PRINTS Haem peroxidase superfamily signature 131 143 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre05g0955 368 PRINTS Haem peroxidase superfamily signature 178 193 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre05g0955 368 PRINTS Haem peroxidase superfamily signature 113 130 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre05g0955 368 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre05g0955 368 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre05g0955 368 FunFam Peroxidase 24 164 - -
Cre05g0955 368 Gene3D - 24 316 - -
Cre05g0955 368 FunFam Peroxidase 156 297 - -
Cre05g0955 368 Pfam Peroxidase 40 282 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre05g0955 368 ProSitePatterns Peroxidases proximal heme-ligand signature. 178 188 IPR019793 -
Cre05g0955 368 SUPERFAMILY Heme-dependent peroxidases 21 316 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre05g0955 368 Gene3D Peroxidase, domain 2 156 297 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre04g1671 Cre-Chr4:35047850 Cre05g0955 Cre-Chr5:8816769 2.30E-93 dispersed
Cre05g0955 Cre-Chr5:8816769 Cre08g1359 Cre-Chr8:26642739 2.40E-97 dispersed
Cre04g0383 Cre-Chr4:13471115 Cre05g0955 Cre-Chr5:8816769 3.00E-72 transposed
Cre05g1774 Cre-Chr5:29716072 Cre05g0955 Cre-Chr5:8816769 8.90E-64 transposed
Cre11g0588 Cre-Chr11:2986905 Cre05g0955 Cre-Chr5:8816769 8.60E-50 wgd
Cre04g0981 Cre-Chr4:28411569 Cre05g0955 Cre-Chr5:8816769 3.70E-38 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre05g0955 K00430 - csv:101210306 567.0