Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre05g0971 ATGGCATCTTCTCGCCTGACTGGAGGATTAGCTCAGTCTCCATCAAGTTCTGGGATTTTCTACCAAGGAGAAGGGCAGTCCCCAGCTATTGTTACTTCTCATTTGAGCCAATCATTTGCAAATTCATCAAATTCAATTCCAGGAACTGGATGTTCTGATTTTGGTCCAGTTTCCGGAGACATGAACAATGCAGTTTTAAATAGTGTGGCAAATTCAGGACCCAGTGTGGGTGCAAGTTCATTAGTTACGGATGCAAACTCTGCACTTTCAGGGGGGCCACATTTGCAAAGGAGTGCAAGCATCAATACAGAGTCGTACATGCGCTTGCCTGCATCGCCTATGTCATTCAATTCAAATAACATTAGTGTTTCGGGGTCCTCAGTTATAGATGGATCCTGTGTTGTGCAGCAAAATTCTCAACAGGACCAAAATATCCAACACATACAGCAACAGACGCAGCCAGGTGCTTCACATGCCACATCATTACCAACATCACAAATAGGCCAAGTATCACTTCCGTTGGGCGGTAAACATCAGGGATCTTTCATTCCAGATCCAAACAGTTATTCTCAGGTGCAGAAGAAACCACGACTGGATATAAAGCCGGAAGATGTGCTGCAACAGCAAGTCTTGCAGCAGCTATTTCAGAGACAGGATTCCATGCAGTCACAAAACCGTAACTCACAGTTACAAGCTTTATTTCAACAGCAAAGAATGCGGCAACAGCAGCAGATTTTGCAGTCTCTACCTCAGTACAGGGCTCAGCTTCAGCAACAGCAGCAGCAGATACAGTTGAGGCAGCAATTGCAACAGCAGGTAATGCAGCCTGTATCACCCATGAAGCGGCCCCCATATGATGCTGGTGGTGTTTGTGCTCGCCGGCTGATGCAATATTTATATCATCAGCGGCAAAGACCTCCTGAAAATAGTATAGCCTACTGGCGAAAGTTTGTAGCAGAGTATTACTCTCCTCGTGCAAAGAAAAGATGGTGTTTGTCATTGTATGAGAATGTTGGCCACCATGCTCTTGGTGTGTTTCCTCAGGCAGCTATGGATGCGTGGCAGTGTGACATTTGTGGTTCCAAATCAGGAAGGGGATTTGAGGCTACGTTTGAAGTACTACCAAGACTCAGCGAGATCAAATTTGGAAGTGGAGTTATTGATGAGCTTTTATTTCTGGACCTTCCCCAAGAAAGAAGATTCTCTACTGGACTTATGATGTTAGAGTATGGAAAAGCAATTCAAGAGAGTGTATATGAGCAACTTCGTGTTGTTCGCGAGGGTCAGCTTCGTATCATATTCACTCAAGACTTGAAGATTTTGTGCTGGGAATTTTGTGCTCGGCGTCATGAAGAACTTCTTCCTCGTAGGTTGGTTGCACCTCAGGTGAATCAGCTGGTACAGGTTGCCCAGAAATGCCAAAACACAATTGCTGAAAGTGGGCCGGATGGTGTTTCTCAGAAAGATTTGCAGACAAATAGCAATATGGTACTGACGGCTGGTCGTCAGCTTGCTAAGAGTCTGGAGTTGCAGTTGCTGAATGACTTGGGTTTCTCTAAAAGATACGTCAGGTGTTTGCAGATATCAGAGGTTGTCAACAGTATGAAAGATCTGATTGGTTTCTGCCGGGATCAAAAAGTTGGGCCTATCGAGGGCTTGAAGAATTATCCTAGGCATGCCACTGCAGCCAAGCTCCAAATGCAAAAAATGCAGGAGATGGAACAGTTAGCGAGTATTCAAGGTCTTCCCACCGACCGCAACACAATTAATAAGCTGATGACATTGCATCCTGAACTTGATAACCATGGGATTAATAACCATCAGATGACTGGTCGAGGAGGTTTCAGTGGTTCAGCACAAGCTGCTTTGGCAATGACTACATACCAGAATATCCTCATGAGACAGAACTCTATGAATTCCAACCCCAGCCCACATCAACAGGAGGCCTCATCTTCTTTCAATAATCCCAACTATAATCCATCCCCTACACTCCAGGGGACTGTATCCCTGATGCCTGGATCCGTACAGAACTCCGCTGTTGGTGGCTTTTCAGGCGCTCAGCAAGCCTTGCAAAAGCAATCGCAGCAGCTGCAACATCATCCACCAAATCCTGGCTCCTTGGTCCAGCAAAATCATCCTCAGACGATTCAAGGTGGCCAGGCCCTACAACAACAGATGATCCAGCAACTACTGCAGATGTCAAGTAACAATAAGAGTGCCGGTTTACAACAGCAACCCCTTACTGGACCAAATGCAAATAGAAGTTTAGGAAGAAGGGGCATGGGTTTTGTGGGCAACACCTCAGTTGCAGCTGTGGCATCTGGAAATATGTCTGGTAGCAACGTCCCTGGTCCGAGTAGGAGCAATAGCTTCAAAGCTGCTTCAAATAGCGAGTCCTCTGCTGGTAACAGTGAATTCAATCAGAAGGGTTCGGATTTCCCGCAAGATCTTCATCTGCCAGAGAATCTGGTTGAAGATATAGGCCAAGATTTCCCTGAAAACGGGTTTATTAACAATGACCTTGATGAGGATTTGGGTTATGTCTGGAAGGCTTGA 2556 45.74 MASSRLTGGLAQSPSSSGIFYQGEGQSPAIVTSHLSQSFANSSNSIPGTGCSDFGPVSGDMNNAVLNSVANSGPSVGASSLVTDANSALSGGPHLQRSASINTESYMRLPASPMSFNSNNISVSGSSVIDGSCVVQQNSQQDQNIQHIQQQTQPGASHATSLPTSQIGQVSLPLGGKHQGSFIPDPNSYSQVQKKPRLDIKPEDVLQQQVLQQLFQRQDSMQSQNRNSQLQALFQQQRMRQQQQILQSLPQYRAQLQQQQQQIQLRQQLQQQVMQPVSPMKRPPYDAGGVCARRLMQYLYHQRQRPPENSIAYWRKFVAEYYSPRAKKRWCLSLYENVGHHALGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLSEIKFGSGVIDELLFLDLPQERRFSTGLMMLEYGKAIQESVYEQLRVVREGQLRIIFTQDLKILCWEFCARRHEELLPRRLVAPQVNQLVQVAQKCQNTIAESGPDGVSQKDLQTNSNMVLTAGRQLAKSLELQLLNDLGFSKRYVRCLQISEVVNSMKDLIGFCRDQKVGPIEGLKNYPRHATAAKLQMQKMQEMEQLASIQGLPTDRNTINKLMTLHPELDNHGINNHQMTGRGGFSGSAQAALAMTTYQNILMRQNSMNSNPSPHQQEASSSFNNPNYNPSPTLQGTVSLMPGSVQNSAVGGFSGAQQALQKQSQQLQHHPPNPGSLVQQNHPQTIQGGQALQQQMIQQLLQMSSNNKSAGLQQQPLTGPNANRSLGRRGMGFVGNTSVAAVASGNMSGSNVPGPSRSNSFKAASNSESSAGNSEFNQKGSDFPQDLHLPENLVEDIGQDFPENGFINNDLDEDLGYVWKA 851
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 8962888 8968085 + CrPI670011_05g009710.1 Cre05g0971 497484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre05g0971 851 MobiDBLite consensus disorder prediction 1 22 - -
Cre05g0971 851 MobiDBLite consensus disorder prediction 140 172 - -
Cre05g0971 851 MobiDBLite consensus disorder prediction 737 752 - -
Cre05g0971 851 MobiDBLite consensus disorder prediction 140 194 - -
Cre05g0971 851 PANTHER LIM DOMAIN-BINDING PROTEIN 17 840 IPR029005 GO:0000122(PANTHER)|GO:0005634(PANTHER)|GO:0005667(PANTHER)|GO:0045944(PANTHER)
Cre05g0971 851 MobiDBLite consensus disorder prediction 737 759 - -
Cre05g0971 851 MobiDBLite consensus disorder prediction 636 712 - -
Cre05g0971 851 MobiDBLite consensus disorder prediction 776 811 - -
Cre05g0971 851 Pfam LIM-domain binding protein 294 554 IPR029005 -
Cre05g0971 851 MobiDBLite consensus disorder prediction 776 817 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g0971 Cre-Chr5:8962888 Cre09g1967 Cre-Chr9:38641534 1.10E-270 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre05g0971 - - - 0.0