Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre05g1024 ATGGCGGCCGGCCTCTCCGCCGCCTTAGTGCCCAAACCACTCCATCTCTTCCTTACTTCCTCCCATCTCTCCCCTAAACCTCGAACTCCGTTTCTGTTTCCACCTTCTGTCTTCCGGAACAGTAGATTCCAATGGAAGATGCGGAGAAAAACTCTGTTCACTGTCTGTGTACTCGTTGAGGATCAAAATAGTTCGGGTGAGGTGGAGAATCTCTCCGATGAAGGATCGCCGATTGTAATCCCTCAGATCCCATCGCCTCATGTTTCAGAAAGATTAGCAAGGAAGAAATCGGAGCGCTTCACTTATCTTGTTGCTGCGGTTATGTCTAGTTTTGGAATTACCTCCATGGCTGTCATGGCGGTTTACTACCGATTTTACTGGCAAATGGAGGGCGGAGAGATTCCTTTCTCTGAAATGTTTGGTACATTTTCTCTCTCTGTTGGTGCCGCTGTCGGGATGGAGTTCTGGGCGAGATGGGCTCATAGGGCTCTCTGGCACTCTTCCTTATGGCATATGCACGAGTCGCACCATAAACCAAGAGAAGGACCGTTCGAATTGAACGATGTTTTCGCCATTGTCAACGCTGTGCCCGCCATAGCTCTTCTTTCTTACGGCTTCTTCCATAAAGGCCTTGTTCCTGGTCTCTGCTTCGGCGCTGGCCTTGGAATTACGGTCTTCGGGATGGCCTACATGTTCGTCCACGACGGTCTCGTTCATAAAAGATTCCCTGTGGGTCCCATCGCCAACGTCCCCTATTTCAGAAAGGTCGCTGCTGCTCACCAGCTTCACCATTCAGACAAGTTCAACGGTGTGCCATATGGGCTGTTTTTGGGTCCGAAGTTTCTTCCTGCCGATGCGGCCACAGTCATCTCCTCCATTGCCACAGTATGTGAAGATCTCTCTCTCTCTCCGATTTTTCACGAGTTATGCAGAAATTTCGGACTGAAAACCAAGCAGTTTAGTGCCGAAATGGGTCCACCGGAATTTCATAATAAGGTCGGTGAAAAGTTTCTTCTCTTTGATTAA 1026 49.22 MAAGLSAALVPKPLHLFLTSSHLSPKPRTPFLFPPSVFRNSRFQWKMRRKTLFTVCVLVEDQNSSGEVENLSDEGSPIVIPQIPSPHVSERLARKKSERFTYLVAAVMSSFGITSMAVMAVYYRFYWQMEGGEIPFSEMFGTFSLSVGAAVGMEFWARWAHRALWHSSLWHMHESHHKPREGPFELNDVFAIVNAVPAIALLSYGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIANVPYFRKVAAAHQLHHSDKFNGVPYGLFLGPKFLPADAATVISSIATVCEDLSLSPIFHELCRNFGLKTKQFSAEMGPPEFHNKVGEKFLLFD 341
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 9482647 9488988 - CrPI670011_05g010240.1 Cre05g1024 497537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre05g1024 341 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 6 281 IPR045019 GO:0009507(PANTHER)|GO:0010291(PANTHER)|GO:0016119(PANTHER)|GO:0016123(PANTHER)|GO:0016491(InterPro)
Cre05g1024 341 Pfam Fatty acid hydroxylase 149 277 IPR006694 GO:0005506(InterPro)|GO:0008610(InterPro)|GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g1024 Cre-Chr5:9482647 Cre09g2279 Cre-Chr9:41993938 6.80E-91 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre05g1024 K15746 - csv:101212140 560.066