Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre05g1063 | ATGGTATGCAGCTACAATATAAGGAATGTGATTGCTCAGGCTGGACGTATAGGAATAATCAATAGACGGGTCCAAATCAACAATATCTGGAGGAGTTTGCCTTCCAATCTTGGATTTGTTCACACCTGGAAGCGTGAATATAGAACAAGTCTCATGATGATGGTAGATACGGGTGCATCGGAAAATCGTGGGCCGGTTGTTGATAAGCATCCAGAGAAAGATGAAGATGGTGGCTATACCAGTGGAGGGTGGAAAAGTGAAGATGGGAAACTTAGTTGGGGGTATTCAAGTTTCAGAGGGAAGAGGGCAACCATGGAAGATTTCTTTGATATTAAAATGTCGAAGGTTGATGGTCAAACCGTCTGCCTTTTTGGCATCTTTGATGGTCACGGTGGATCACGAGCTGCAGAGTTTTTGAAGGACCATCTCTTTGAGAATCTGATGAAGCACCCAAAATTTTTGATGGATACCAAATTAGCTATCAGTGAAACATATCAACAGACGGATGCTGAATTTTTAAATTCGGAAAAGGATACTTTAAGGGACGATGGCTCTACTGCTTCAACAGCTTTGCTGGTTGGCAATCATCTCTATGTTGCCAATGTTGGAGATTCACGTACTATTATATCAAAGGGGGGTGAAGCGATCCCTCTTTCCGAGGACCATAAACCAAACAGAACTGACGAGCGGAGGAGAATTGAAAATGCTGGGGGTGTTGTCATGTGGGCTGGCACTTGGAGGGTAGGAGGAGTGTTAGCAATGTCCCGTGCTTTCGGTAACAAGATGTTGAAGCAGTTTGTTGTGGCGGATCCTGATATTCAGGATCTTGAAGTAGACAAGGACATCGAGTTGCTTGTTCTCGCAAGTGATGGACTTTGGGACGTGGTACGCAACGAGGATGCAGTATTAGTTGCAGGGAAGGAAGATGAACCGGAGGCAGCTGCTCGGAAGCTAACTGAAGCGGCGTTTACCCGTGGTAGCGCTGACAATATAACATGCATCGTGGTGAAGTTTCATCATGACAATGCAGGTCCTGCTGCGGATACTCGAGAAAATAACTAA | 1062 | 45.1 | MVCSYNIRNVIAQAGRIGIINRRVQINNIWRSLPSNLGFVHTWKREYRTSLMMMVDTGASENRGPVVDKHPEKDEDGGYTSGGWKSEDGKLSWGYSSFRGKRATMEDFFDIKMSKVDGQTVCLFGIFDGHGGSRAAEFLKDHLFENLMKHPKFLMDTKLAISETYQQTDAEFLNSEKDTLRDDGSTASTALLVGNHLYVANVGDSRTIISKGGEAIPLSEDHKPNRTDERRRIENAGGVVMWAGTWRVGGVLAMSRAFGNKMLKQFVVADPDIQDLEVDKDIELLVLASDGLWDVVRNEDAVLVAGKEDEPEAAARKLTEAAFTRGSADNITCIVVKFHHDNAGPAADTRENN | 353 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 9878767 | 9882731 | - | CrPI670011_05g010630.1 | Cre05g1063 | 497576 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre05g1063 | 353 | Gene3D | - | 84 | 343 | IPR036457 | - | |
Cre05g1063 | 353 | SUPERFAMILY | PP2C-like | 88 | 339 | IPR036457 | - | |
Cre05g1063 | 353 | PANTHER | PROTEIN PHOSPHATASE | 78 | 337 | IPR015655 | GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Cre05g1063 | 353 | ProSitePatterns | PPM-type phosphatase domain signature. | 123 | 131 | IPR000222 | GO:0043169(InterPro) | |
Cre05g1063 | 353 | MobiDBLite | consensus disorder prediction | 60 | 83 | - | - | |
Cre05g1063 | 353 | ProSiteProfiles | PPM-type phosphatase domain profile. | 92 | 338 | IPR001932 | - | |
Cre05g1063 | 353 | Pfam | Protein phosphatase 2C | 96 | 331 | IPR001932 | - | |
Cre05g1063 | 353 | CDD | PP2Cc | 94 | 338 | IPR001932 | - | |
Cre05g1063 | 353 | MobiDBLite | consensus disorder prediction | 63 | 81 | - | - | |
Cre05g1063 | 353 | SMART | PP2C_SIG_2 | 90 | 338 | IPR001932 | - | |
Cre05g1063 | 353 | FunFam | Probable protein phosphatase 2C 76 | 84 | 344 | - | - | |
Cre05g1063 | 353 | SMART | PP2C_4 | 82 | 336 | IPR001932 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre05g1063 | Cre-Chr5:9878767 | Cre05g1771 | Cre-Chr5:29588318 | 6.80E-94 | dispersed | |
Cre05g1063 | Cre-Chr5:9878767 | Cre05g1069 | Cre-Chr5:9954650 | 1.40E-33 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre05g1063 | K17506 | - | csv:101203681 | 693.73 |