Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre05g1091 ATGGAAAAGTTTGGAGGGAAAAGTTTGGAGATGAGGATGAGGCAGAGGTATTGGGGTCGGACCCCACTTGGTGATGGTATGGTCAAAATGGCTTTGCTGAGTCCTCGATTGCATAGATTCCGGCTAACCAAGCTCCACCATACCTCCGCCTCCAAACCCACCAAAACAACTAAGCTCACTCTCACAAGAAAAACCAGATGCTGCTCTGCCATAGCTATTGATGCTCCATCTTCTTTAACAGATGCTGCAGGAATCAGATGGGGTTCCACTACTTTGCAAGGCTTGCGAGAAGAAATGGAAGACGATGCTGTTGTGCGGTCTGATGGTTTCAATGGCTTCTTGTTTGCTGCAGTGTTCGATGGCCATGGTGGCTATTCCTCTGTCAAGTTCCTCAGGGAGGAGCTGTACAAAGACTGCGTAGCAGCTTTACAAGGCGGCCTGCTATTGAATGGAGGGGATTTTGAAGTGATAAAATCGGCGTTGGAGAAAGCTTTTGATGATACTGATAAGAGATTACTCCTTTTGCTTGAGGCAGCTGGGGAGGAAGATGAATCTGGTTCCACTGCCACTGTTGCATTCATTCGAAATGATGTGCTGTTCATTTCACATATTGGTGACTCTTGTATTGTATTATCTCGTTCTGGAGGAGCACAGGTGTTGACTAGTTCTCATCGGCCTTATGGAAATAACAGCACTTCACTACAAGAAATTAGAAGAATTAGAGAAGCAGGTGGATGGATTGTTAATGGGAGAATCTGCGGGGACATCTCTGTATCGCGTGCATTTGGTGACATACGATTCAAGACGAAGAAAATCGAGATGCTACAAAAAGGAGTTGAAGAAGGGAGATGGTCAGAAAAATTTATTTCTCGTGTACAGTTCAATGGAGATTTGGTTACTGCATCACCAGAAATTTTCCAAGTTACGCTCGGATCAAATGTTGAATTTATACTGATGGCATCAGATGGCCTATGGGATTACATGAATAGCTCTGATGCGGTTATGTTTGTTCGGAATGAACTTCGACAGCATGGCGATGTTCAGCTAGCATGTGAAGCCCTCGCTCAAGCAGCCTTGGATAAAGGGTCACAAGACAATATCAGCATTATCATGGCTGATTTAGGGCGGACAGATTGGCAAAATTTGCCCCTTAAGCAAGACAATGTCATATTTGAGCTGGCTCAAGCTTTTGCTACGATCGGACTTGTTTCTTTTGGTATTTGGTGGGCATCCTCTAGTTTCTCTCTTTAA 1251 44.52 MEKFGGKSLEMRMRQRYWGRTPLGDGMVKMALLSPRLHRFRLTKLHHTSASKPTKTTKLTLTRKTRCCSAIAIDAPSSLTDAAGIRWGSTTLQGLREEMEDDAVVRSDGFNGFLFAAVFDGHGGYSSVKFLREELYKDCVAALQGGLLLNGGDFEVIKSALEKAFDDTDKRLLLLLEAAGEEDESGSTATVAFIRNDVLFISHIGDSCIVLSRSGGAQVLTSSHRPYGNNSTSLQEIRRIREAGGWIVNGRICGDISVSRAFGDIRFKTKKIEMLQKGVEEGRWSEKFISRVQFNGDLVTASPEIFQVTLGSNVEFILMASDGLWDYMNSSDAVMFVRNELRQHGDVQLACEALAQAALDKGSQDNISIIMADLGRTDWQNLPLKQDNVIFELAQAFATIGLVSFGIWWASSSFSL 416
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 10240663 10244489 + CrPI670011_05g010910.1 Cre05g1091 497604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre05g1091 416 SMART PP2C_4 76 372 IPR001932 -
Cre05g1091 416 Gene3D - 85 380 IPR036457 -
Cre05g1091 416 Pfam Protein phosphatase 2C 88 367 IPR001932 -
Cre05g1091 416 PANTHER PROTEIN PHOSPHATASE 2C 76 373 IPR015655 GO:0004722(InterPro)|GO:0006470(PANTHER)|GO:0006470(InterPro)
Cre05g1091 416 CDD PP2Cc 85 374 IPR001932 -
Cre05g1091 416 SUPERFAMILY PP2C-like 83 375 IPR036457 -
Cre05g1091 416 ProSitePatterns PPM-type phosphatase domain signature. 115 123 IPR000222 GO:0043169(InterPro)
Cre05g1091 416 ProSiteProfiles PPM-type phosphatase domain profile. 86 374 IPR001932 -
Cre05g1091 416 FunFam Protein phosphatase 2C 57 85 381 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g1091 Cre-Chr5:10240663 Cre08g0590 Cre-Chr8:18810273 5.90E-28 dispersed
Cre05g1091 Cre-Chr5:10240663 Cre02g0750 Cre-Chr2:4340037 4.80E-14 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre05g1091 K04457 - csv:101218076 688.723