Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre05g1128 ATGGGGAAAGGACCATTTTCTTTTCGCCGGAGCAGTAGTCGCCGCCGCCCTAAGAAGGCGGTTCAGTCGTCACCGTCCTTATCGCCACAGCCACCTCCGCAGATTAGCACCAGTTCTCCTCCCATTAACAATAATGGGAATGGATTGGTTGGTGGTGGGGGTGGTGGGGTGGTGGGAAAAGTGAAGAAGAAGGCCGGAGGAGCTAGGCTGTGGATGCGTCTCGACAGGTGGGGACAATCGGAGCTTTTAGAGTGGGACAAGAATGCTATAATCCGACGTGCTGCAATTCCGGCTAGGGATTTGAGGATTCTTGGTCCTGTTTTCTCACACTCATCTAGCATACTCGCCAGGGAAAAGGCCATGGTCGTTAATTTAGAGTTCATAAAAGCTATAGTTACTGCTGAAGAAGTCCTATTACTTGACCCTCTTCGCCAAGAGGTTATTCCATTTGTAGATCAGCTAAGGAAGCTACTTGCTAAGACGGGTTCATCTCAACTTGAAAATGATGGGAATGTTTCGAGAGGAGGAAAGTGGTTGCCAGTTTCAGAAGCTGCTGAAGGTGAGCAGTATGAGCTCCCATTTGAGTTTCAGGTTCTGGAAAATGCTTTGGAGGTTGTGTGCATGTACTTGGATTCCAGTGTGGCAGACCTTGAGCGAGACGCTTATCCAGTTCTGGATGAACTGGCTAGGAATGTCAGCACCAAGAATCTAGAACGTGTGAGGAGTTTGAAAAGTAATCTTACCCGTATTCTTGCACGCGTTCAGAAGGTGCGGGATGAGATAGAACATCTATTAGATGATAATGAAGATATGGCACAACTATATTTGACAAGGAAATGGATGCAGAATCAACAATTTGATGCTTTGCCGGGAGGTGTGGCTTCCAACAGCGCAACTGCTATCGTTCCCCATCTTCGTCGACTTAGTTCCACCAGGAGTGGCAGTGTGGTGACCAGCAACCTTTTGGATGATAATGACATAGAGGACCTGGAGATGTTGCTCGAGGCATACTTTATGCAGTTGGATGGGACTCGTAACAGGATATTATCGGTTAGGGAATACATCGACGACACCGAGGATTATGTCAATATTCAACTTGACAACCAAAGAAATGAACTCATTCAGTTTCAGTTAACCCTGACAATTGCTTCATTTGCCATAGCGGTTGAAACCTTAATCGCCGGGTTGTTTGGTATGAACATCCCTTGTACATTGTACGAGACGGATGGGGTGTTTGGGTACTTTGTCGGAGGTACTTCAGCAGGATGTTTATTGCTTTTCCTGCTTATTTTTGGCTTCGAAGATCTTCGTTCTTCAATCGCCACAAAGGAAAAGGAATTTTTCATATTTCTTACTATGGCAAATTCTAAAGGGTCATCCAACGTCAGAAGTTTTATGAGTTCTGGGAAACATGCACTACTCCCTCCTAAAAGTCCCTTTCCTAGTGTTTCTCCATCATATACGGAATATGTTCCTAATAGTGTAATCGGAGCAAAAGCTGTTCAGAGACCAAGAGATGGTAACAGCTACCATCAAAGAACTTCTTCCGAAAGTATTTTAATAGAGGAGCAGCCTTCTTGGCTTGATGATCTCCTCAATGAGCCAGAGACCCCTGTTCGCAGAGTTGGTCATCGACGTTCGTCGAGTGACTCCTTTGCATATACAGATGCTGCTAATGTAAATTTTGATAGTATCATGCAAGAAGAATTTAGATATGCAAATGCAATTCCTGGACACTCTTGGTTATCTCAAGAATTTGATCATCAGAGAGATGCAAGGCATGCTTCATTCTATACTGAAGCGAATATAGCAAAACAGAAGAATAGGGTGTGGGAGTCGTCTTTATCTACCATGAATAATCCCATTGCCCTTCATTCTCCTAGGGAGAACATTGGTATTCATACCTCAGGGCCACTAAACACGCCACAGGAAGCAGATGGTTTGCCTTCTACGGCAAGTGAGAAACAGGATTCAACTGAGTCTGGTTCACACGATCCAAAAGTCTCTTCTGACAGGAAAGATGCTTCTCATGGAAAATCATCTGTGTCTGATACAGAAAATAAACGCGCAAAACAGCAATTTGCTCAGCGTTCAAGGGTTCGGAAACTTCAATATATAGCTGAGCTTGAAAGGAAAGTACAAGCTTTGCAGGCAGAGGGCTCTGAAGTCTCAGCTGAGCTTGAATTTCTCAACCAACAAAATCTTATTCTTAGCATGGAAAACAAAGCCCTCAAGCAGCGGTTAGAGAATTTAGCTCAAGAGCAGCTAATTAAATACTTGGAGCAGGAAGTACTGGAGAGGGAGATTGGAAGGTTAAGAACTGTGCACCAGCAGCAACATCATCAGCAGCAACAACCACAACAGCTACGACCTTCTTCTAGTCATCGGCGTACTTCGAGCAAAGACCTTGACAATCAATTTGCTAACCTTTCTTTGAAGCAAAAGGATTCTGGTTCAAGTCGTGACCCAGTAACAGGTCCAGTGCGCAACGCCGCTGATCTCTTCCAGTCTTGGGTTGATCATCGGACGGGCAATGTTGATTTTGGGCTAAAATTGCCGCCGACCACTGATGTATTGGTTGCTGTCGGTCGGCGTTCTAGAATAGGAGTGAAGAAGAAAACTAAAAGAGTAGAAAAGAAACAAACTGGCTGTCCGATGTTGGTTTTTGGTCGGTTTCGGCCGGTTCGATTGGTTTTCGGTTTGTTTTGCTCACCTCTAGTCAAAGCCTTCGAAATAAGGTTCAAACTAATTGTTGTAGTGAACTTTTACCCATAG 2775 44.61 MGKGPFSFRRSSSRRRPKKAVQSSPSLSPQPPPQISTSSPPINNNGNGLVGGGGGGVVGKVKKKAGGARLWMRLDRWGQSELLEWDKNAIIRRAAIPARDLRILGPVFSHSSSILAREKAMVVNLEFIKAIVTAEEVLLLDPLRQEVIPFVDQLRKLLAKTGSSQLENDGNVSRGGKWLPVSEAAEGEQYELPFEFQVLENALEVVCMYLDSSVADLERDAYPVLDELARNVSTKNLERVRSLKSNLTRILARVQKVRDEIEHLLDDNEDMAQLYLTRKWMQNQQFDALPGGVASNSATAIVPHLRRLSSTRSGSVVTSNLLDDNDIEDLEMLLEAYFMQLDGTRNRILSVREYIDDTEDYVNIQLDNQRNELIQFQLTLTIASFAIAVETLIAGLFGMNIPCTLYETDGVFGYFVGGTSAGCLLLFLLIFGFEDLRSSIATKEKEFFIFLTMANSKGSSNVRSFMSSGKHALLPPKSPFPSVSPSYTEYVPNSVIGAKAVQRPRDGNSYHQRTSSESILIEEQPSWLDDLLNEPETPVRRVGHRRSSSDSFAYTDAANVNFDSIMQEEFRYANAIPGHSWLSQEFDHQRDARHASFYTEANIAKQKNRVWESSLSTMNNPIALHSPRENIGIHTSGPLNTPQEADGLPSTASEKQDSTESGSHDPKVSSDRKDASHGKSSVSDTENKRAKQQFAQRSRVRKLQYIAELERKVQALQAEGSEVSAELEFLNQQNLILSMENKALKQRLENLAQEQLIKYLEQEVLEREIGRLRTVHQQQHHQQQQPQQLRPSSSHRRTSSKDLDNQFANLSLKQKDSGSSRDPVTGPVRNAADLFQSWVDHRTGNVDFGLKLPPTTDVLVAVGRRSRIGVKKKTKRVEKKQTGCPMLVFGRFRPVRLVFGLFCSPLVKAFEIRFKLIVVVNFYP 924
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 10719974 10741890 - CrPI670011_05g011280.1 Cre05g1128 497641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre05g1128 924 Gene3D - 59 142 - -
Cre05g1128 924 FunFam Magnesium transporter MRS2-1 59 142 - -
Cre05g1128 924 Pfam Magnesium transporter MRS2-like 84 286 - -
Cre05g1128 924 Coils Coil 699 754 - -
Cre05g1128 924 Pfam CorA-like Mg2+ transporter protein 329 431 IPR002523 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
Cre05g1128 924 Coils Coil 240 274 - -
Cre05g1128 924 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 461 813 IPR044797 -
Cre05g1128 924 MobiDBLite consensus disorder prediction 633 657 - -
Cre05g1128 924 MobiDBLite consensus disorder prediction 776 794 - -
Cre05g1128 924 MobiDBLite consensus disorder prediction 774 801 - -
Cre05g1128 924 MobiDBLite consensus disorder prediction 627 697 - -
Cre05g1128 924 CDD bZIP_plant_RF2 688 734 IPR044759 GO:0003700(InterPro)|GO:0006355(InterPro)
Cre05g1128 924 CDD Mrs2_Mfm1p-like 71 423 IPR039204 -
Cre05g1128 924 SMART brlzneu 684 743 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cre05g1128 924 MobiDBLite consensus disorder prediction 658 693 - -
Cre05g1128 924 Gene3D Magnesium transport protein CorA, transmembrane region 148 373 - -
Cre05g1128 924 MobiDBLite consensus disorder prediction 1 55 - -
Cre05g1128 924 SUPERFAMILY Leucine zipper domain 695 737 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g0369 Cre-Chr2:810395 Cre05g1128 Cre-Chr5:10719974 6.70E-199 dispersed
Cre05g1128 Cre-Chr5:10719974 Cre11g1774 Cre-Chr11:29357109 2.20E-99 dispersed
Cre05g1128 Cre-Chr5:10719974 Cre06g1415 Cre-Chr6:8444609 2.40E-82 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre05g1128 K16075 - csv:101203496 707.212