Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre05g1144 ATGAAAATGGAGGAAGACGACGAAGAAAGAAAATCCACCTTCCCAGCCACCACTACCACCAAATACAAAAGAGAAGCAAAAAAACTAGAAAATGGTGGAAAATTTCTTTCGACAACACCCGGTTTTTTCTTTTCTTCGGATTTTCCTTTGAAACCCATCTCAATTTCAGTATACCCAGTAAAGAATTCGATGCAAAATCAGGAAACGATGAAGATTTTCAGTAGTTTCCTTCTTTGTTTACTCTCTGTAGTAACTGCAACTTCAGCAGCCACTCCAATCGCAAACCCCATCTGCCCAATGGACCTCAACTATGTCCTCAGGATCCCTTGGAATGCCACTGATTGTCGGAACCCTTTCTTCCAGACCACTGCCAAATCCGCCATGAATGATACCTCCAAAATCCCTTGTTGTCAAACCCTTTTGTCCTTGTTTGGAATTGCTTTGGCCCAACACCTTAAAGAGACTTCTCTTTTCAACCTCCCAGACCTCGCAACCTCCAATTCTTGCCTTCGCGATTACCAATCGAAGCTCTCCTCGCTCTCCCTTCCCGGCGACCTTGTTTCCAATTGCTTTAATCCTTTGCAATTTGTGATCTCTGCTAATGTCTGTGCTGGTATTCAAACTACTCGAGATTGGGTTTCGAAACTTGGCCCTAACTCCCCGCTCGATTCTGGGTGTCGGTCGGAACTTGTTGGTCCTGGTTGTGATGCTTGTCTCGCCGCTGGTCTCAAAGTTCAAGCGACTTTGACTCGAATTGATGGTAATAAATCTCATTCTATGGATTGTTTTTACTTTGCTGTTCTTTATGCTGCTGGCATTGTGAATGAGTCTGGCCCTGAGGGCGACAGTGCGTTGGGTTGCATATTCAATTTGCCATTGAGTACTCAAAAGGATTCCAAAAGTAATCATTCTGCTCTAGTTTATGGCCTTACTGCTGCTGCTGTTGGAATTTTGGTTGTTTTTGTTCTTTTGGGAATAGGATTTTGGTTTTACAAATGGAAAAATTTGGCTCAGAAGTCTAGTTTAGAGTTTGATGTGGAGCTGGATGAACAAGGGTCTAGGCCACATGCCAGGCCAAACACTGGATCAATTTGGTTCAAGATTCAGGAGCTTGAGAAGGCAACTAATAACTTTTCTTCAAAAAACTTCATTGGGAGAGGTGGGTTTGGTTTAGTTTACAAAGGGACATTACCTGATGGAAGTATGGTGGCAGTCAAGAAAGTAATTGAATCAGATTTTCAAGGCAATGCCGAGTTTTGCAATGAGGTTGAAATAATCAGTAATCTGAAGCATAGGAATCTTGTTCCACTTCGTGGTTGTTGCGTGATCGATGGGGATGACGGTCATGATGAGGGAGCAAGTGAGAGATACCTTGTTTACGATTACATGCCAAATGGAAATCTCGATGACTATTTGTTCCCTATACCATTTGATGAAGTTGGAACTGTAAAAAAATCATTGACATGGCCTCAAAGGAAGAATATTATCTTGGACGTGGCAAAGGGCTTAGCCTATCTGCACTATGGAGTGAAACCTGCCATATATCACAGAGATATCAAGGCGACGAACATATTGCTAGATGCAGACATGAGAGCAAGAGTGGCAGATTTCGGGCTCGCCAAACAAAGCAGGGAAGGACAGTCTCATCTAACGACTCGAGTTGCAGGTACTCATGGGTATTTAGCCCCTGAATATGCGCTTTATGGACAACTAACTGAGAAGAGTGATGTTTATAGCTTTGGAGTAGTTGTTTTGGAGATAATGTGTGGGAGAAAAGCTCTTGATTTCTCTCTGTCGTCATCACCGCGTGCATTCCTGATCACAGATTGGGCTTGGTCCTTGGTGAAAGCTGGAAAAATAGGGGAAACTCTAGACCCTTCACTGCTGAAAGATGGGGATTCTTCTAATTCAAATCCAAAAGCCATAATGGAAAGATTCATTGCGGTTGGAATTTTATGTTCTCATGTGATGGTTGCTTTGAGGCCCACCATTATGGAAGCTCTGAAAATGTTGGAAGGTGACATTGAAGTTCCCCAAATTTCTGATCGGCCAGTGCCTTATGGACATCCTTCATTTGTTGGTGATGGCAGCAACTTCAGTATATCACCGACATTAAGTGGACGTGAATTGCATAACGGTGACATGCTCAGATGA 2154 43.04 MKMEEDDEERKSTFPATTTTKYKREAKKLENGGKFLSTTPGFFFSSDFPLKPISISVYPVKNSMQNQETMKIFSSFLLCLLSVVTATSAATPIANPICPMDLNYVLRIPWNATDCRNPFFQTTAKSAMNDTSKIPCCQTLLSLFGIALAQHLKETSLFNLPDLATSNSCLRDYQSKLSSLSLPGDLVSNCFNPLQFVISANVCAGIQTTRDWVSKLGPNSPLDSGCRSELVGPGCDACLAAGLKVQATLTRIDGNKSHSMDCFYFAVLYAAGIVNESGPEGDSALGCIFNLPLSTQKDSKSNHSALVYGLTAAAVGILVVFVLLGIGFWFYKWKNLAQKSSLEFDVELDEQGSRPHARPNTGSIWFKIQELEKATNNFSSKNFIGRGGFGLVYKGTLPDGSMVAVKKVIESDFQGNAEFCNEVEIISNLKHRNLVPLRGCCVIDGDDGHDEGASERYLVYDYMPNGNLDDYLFPIPFDEVGTVKKSLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVVLEIMCGRKALDFSLSSSPRAFLITDWAWSLVKAGKIGETLDPSLLKDGDSSNSNPKAIMERFIAVGILCSHVMVALRPTIMEALKMLEGDIEVPQISDRPVPYGHPSFVGDGSNFSISPTLSGRELHNGDMLR 717
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 10955273 10957426 - CrPI670011_05g011440.1 Cre05g1144 497657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre05g1144 717 Pfam Protein kinase domain 380 595 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre05g1144 717 ProSiteProfiles Protein kinase domain profile. 378 647 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre05g1144 717 ProSitePatterns Protein kinases ATP-binding region signature. 384 407 IPR017441 GO:0005524(InterPro)
Cre05g1144 717 SUPERFAMILY Protein kinase-like (PK-like) 356 672 IPR011009 -
Cre05g1144 717 PANTHER OS01G0750732 PROTEIN 114 680 IPR050885 -
Cre05g1144 717 ProSitePatterns Serine/Threonine protein kinases active-site signature. 514 526 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre05g1144 717 Gene3D Phosphorylase Kinase; domain 1 343 462 - -
Cre05g1144 717 SMART serkin_6 378 671 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre05g1144 717 FunFam probable receptor-like protein kinase At1g11050 339 462 - -
Cre05g1144 717 Pfam SPARK 96 263 IPR043891 -
Cre05g1144 717 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 463 679 - -
Cre05g1144 717 Gene3D Transferase(Phosphotransferase) domain 1 463 681 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g1144 Cre-Chr5:10955273 Cre09g0631 Cre-Chr9:5960346 2.20E-99 dispersed
Cre05g1144 Cre-Chr5:10955273 Cre10g1544 Cre-Chr10:29422633 2.40E-69 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64144 PF00069 Pkinase 9.80E-43 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre05g1144 - - - 0.0