Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre05g1365 ATGGCGGCTCCGGCTGACCGGCTCCGCCCTGTTGTGAAGTTTTCCAGCCAGGGGATTCGTTTTGATGAGGATTCTGCGGAGACCCGGCCTCTGCTTTCCAGGATGCTGAATTATCCGATTGGGATTATTCACCACCAGTTGCGCCGCCGTCTCGGTGCCGGGAAGCCCCAGGTGCCAGGGCGTCAGCAGTCTTTTAGTCGAGATCTTGGCCATGCAGCTGCGGAAACCCTTCTTATTACTCGGTTGAGCTTCACTCTCCTTCGATCTCTTGGGGTAGGGTACCGGTGGGTCGTAAAATTAACTGCACTTGCAGTTTATGCCATTCTTCTTATGCCCGGTTTTCTTCAAGTTATGTATGATTATTACTTCTCAAGTCAGGTTCGGAGGGATATTATTTATGGAAATCAACCAAGAAATAGCTTGGATTTGTATCTACCTACAAATACTGATAAAAAAAAACCAGTTGTGATATTTGTTAGCGGTGGAGCTTGGATTATTGGGTATAAAGCATGGGGAGCACTTTTAGGACTGCAGTTGGCAGAGAGAGACGTCATTGTAGCCTCAATTGACTATAAAAACTTCCCTCAGGGTTCAATCAGTGACATGGTGAGAGATGTTTCTCAAGGGATTTCATTTGTATGCAAGAATATAGCAGACTATGGAGGAGATCAAGACAGAATCTTTCTGATGGGACAATCAGCTGGTGCACATATTTCCGTTTGTGCCCTCTTGGAGCAAGCAATCAAAGAAGCCAGAAAAGAACAGAGTGTAGATTGGAGTGTCTCCCAAATAAGAGCTTATTTTGGTTTATCTGGAGGGTATAACTTGTTGAAACTAGTTGATCACTTTGATAGTCGGGGTCTATACCGTTCCGTCTTTTTGAGTATAATGGAAGGTGAAGAATCTTTGTCCCAATTTTCCCCGGAAATAAGAATCCAAGATCCAAGCATTAGTGATGTTGTACCCAGTTTACCTCCTTTTGTTCTTTTCCATGGCACTGGTGATTATTCAATCCCATCAGATGCCAGTGAAACTTTTGTGGAGACACTTCGAAAAGCAGGTGTACAAGCTGACCTATTTCTCTATGAGGGAAAAACTCATACAGATTTGTTCCTTCAAGATCCCTTTAGGGGAGGCAGTTATGAACTTTTTGATCAAATAGTTGCCATATTACATGCTGGTGATGAGGAAGCCCTTGCAAAGGATTCAATGGCGCCGCCAAAACCGCGCCTTGTTCCAGAGATTTTGATAAGATTGGCACGAATGGTTAGCCCTTTCTGA 1281 44.34 MAAPADRLRPVVKFSSQGIRFDEDSAETRPLLSRMLNYPIGIIHHQLRRRLGAGKPQVPGRQQSFSRDLGHAAAETLLITRLSFTLLRSLGVGYRWVVKLTALAVYAILLMPGFLQVMYDYYFSSQVRRDIIYGNQPRNSLDLYLPTNTDKKKPVVIFVSGGAWIIGYKAWGALLGLQLAERDVIVASIDYKNFPQGSISDMVRDVSQGISFVCKNIADYGGDQDRIFLMGQSAGAHISVCALLEQAIKEARKEQSVDWSVSQIRAYFGLSGGYNLLKLVDHFDSRGLYRSVFLSIMEGEESLSQFSPEIRIQDPSISDVVPSLPPFVLFHGTGDYSIPSDASETFVETLRKAGVQADLFLYEGKTHTDLFLQDPFRGGSYELFDQIVAILHAGDEEALAKDSMAPPKPRLVPEILIRLARMVSPF 426
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 15664196 15670394 + CrPI670011_05g013650.1 Cre05g1365 497878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre05g1365 426 Gene3D alpha/beta hydrolase 120 374 IPR029058 -
Cre05g1365 426 Pfam BD-FAE 141 350 IPR049492 -
Cre05g1365 426 PANTHER AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C 59 391 IPR050300 GO:0016298(PANTHER)
Cre05g1365 426 SUPERFAMILY alpha/beta-Hydrolases 107 388 IPR029058 -
Cre05g1365 426 FunFam Isoprenylcysteine alpha-carbonyl methylesterase ICME 123 375 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g1365 Cre-Chr5:15664196 Cre05g2490 Cre-Chr5:36278616 1.10E-133 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre05g1365 K15889 - csv:101206540 636.336