Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre05g1439 ATGGCCATCTCTGAAACTCAGTTCCCTTCTTCTCTCATCCCTAATTTCCTCTACTCCTCTTCTGCCATTCCATTCCACAAGATTCTCCGCTCCAATCTTCCTTCTGAATCGCCATCTCCGAGCCTCGAATCCTCCACTTCCATGAAGGCCTTCGCGGTTCCTTCTCCCACTGAACCGAGCAAGAAATTGGAGATGTATTCGCCGGCTTTCTACGCCGCCTGTGCCGTCGGTGGAAGCCTCAGCTGCGGCCTCACTCACATGACCGTCACTCCGCTCGATCTCGTCAAGTGTAATATGCAGATTGACCCGGTGAAATACAAGAGCATTTCATCTGGTTTTGGAATTTTGCTAAATGAGCAAGGAATCAGGGGGCTGTTTAGGGGTTGGGCGCCAACTCTACTAGGTTACAGTGCTCAGGGTGCTTGCAAGTATGGCATCTACGAATTCTTTAAGAAATACTATTCCGATATAGTCGGTCCTGAGTATACAGCAAAGTACAAGACATTGATCTATCTTGCTGGTTCTGCATCTGCTGAAGTGATTGCAGATGTTGCACTTTGCCCCTTTGAAGCTGTTAAAGTTAGAGTTCAGACACAGCCAGGTTTTGCCAGAGGTTTGTCAGATGGCCTTCCCAAATTTGTTAGATCGGAAGGTGCTCTTGGGTTGTATAAGGGTATTGTTCCTCTGTGGGGACGTCAGATCCCATATACAATGATGAAGTTTGCAACATTTGAGAACCTGGTGGAACTCATATACAAGCATGTCATCCCCAAGCCAAAGAATGAATGCAGCAGCGCCTTGCAGCTCGGCGTCAGTTTTGCTGGTGGATATATTGCCGGTGTTTCTTGTGCTATAGTTTCTCATCCTGCGGATAATCTTGTCTCCTTTCTCAATAATGCTAAAGGGGCTACCGTTGGTGAGGCAGTTCAGAAGCTTGGATTATGGGGTCTCTTCACACGAGGGCTGCCTCTACGCATAGTGATGATTGGAACCCTCACTGGAGCTCAGTGGGTTATCTATGACGCATTCAAAGTTTCTGTGGGATTGCCAACTACCGGTGGGGTTGCCCCTCCCATTGCTGCATCCCCAGAACATACAACTGCGAGTGCGTAG 1113 48.34 MAISETQFPSSLIPNFLYSSSAIPFHKILRSNLPSESPSPSLESSTSMKAFAVPSPTEPSKKLEMYSPAFYAACAVGGSLSCGLTHMTVTPLDLVKCNMQIDPVKYKSISSGFGILLNEQGIRGLFRGWAPTLLGYSAQGACKYGIYEFFKKYYSDIVGPEYTAKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLSDGLPKFVRSEGALGLYKGIVPLWGRQIPYTMMKFATFENLVELIYKHVIPKPKNECSSALQLGVSFAGGYIAGVSCAIVSHPADNLVSFLNNAKGATVGEAVQKLGLWGLFTRGLPLRIVMIGTLTGAQWVIYDAFKVSVGLPTTGGVAPPIAASPEHTTASA 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 17811377 17816438 + CrPI670011_05g014390.1 Cre05g1439 497952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre05g1439 370 FunFam Phosphate carrier protein, mitochondrial 69 347 - -
Cre05g1439 370 Pfam Mitochondrial carrier protein 167 254 IPR018108 -
Cre05g1439 370 Pfam Mitochondrial carrier protein 71 155 IPR018108 -
Cre05g1439 370 ProSiteProfiles Solute carrier (Solcar) repeat profile. 69 153 IPR018108 -
Cre05g1439 370 SUPERFAMILY Mitochondrial carrier 71 342 IPR023395 -
Cre05g1439 370 ProSiteProfiles Solute carrier (Solcar) repeat profile. 166 250 IPR018108 -
Cre05g1439 370 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 49 356 IPR044677 GO:0005315(PANTHER)|GO:0005315(InterPro)|GO:0031305(PANTHER)|GO:0035435(PANTHER)|GO:1990547(InterPro)
Cre05g1439 370 Gene3D Mitochondrial carrier domain 70 352 IPR023395 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g0667 Cre-Chr2:3624754 Cre05g1439 Cre-Chr5:17811377 2.50E-84 dispersed
Cre05g1439 Cre-Chr5:17811377 Cre09g1754 Cre-Chr9:35914676 7.00E-166 dispersed
Cre05g1439 Cre-Chr5:17811377 Cre05g2263 Cre-Chr5:34197596 1.60E-08 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre05g1439 K15102 - csv:101203018 658.677