Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre05g1477 ATGGGAAGGCGATCCGTATGGGTTGCACTTCTTGTCTTTTCTCTTCTTCTTTCTCTGCGACCCCACACAGTTTCTTCCACGCTTCCTCTTCAATCATTGATTCAGGGTTCTAAAGATTCTGCCAGTGAAAGTACTCCAGAGCAGGATTGGAACAATGCTCATGAGGTACATTGCTCAAGAGAAAGGAGTAGGGCGGCGTGGAAAATAATTGAGGAGTATCTAATGCCCTTTGTGGAAAAAAAGAAATACAAGATTTCTACTAAGTGTAGACTTCACCCTGATAATGATATGTTCAGAGATCAAGAACAGCACAAGAGCCATCTAGATTTTAATGACTGGAAGTGTGGATATTGTAGAAAAAGATTCTATGAAGAAAAGTATCTCGATCAGCACTTTGACAATAGACACTATAATTTGCTCAATGTGAGTCGAAGCAGGTGCTTGGCAGATCTTTGTGGTGCATTGCACTGTGACCATGTGATAGATACAGTATCACAGAAAAGTAAATGCAATCCTGCTGCTGCTGCAAGAAATAAACATATGTGTGAGGGTCTTGCTGACAGCTGTTTTCCGGTTGATGAGGGTGCTTCGGCCAGCCATCTTCACGAATTCTTCTTGCGCCAGTTCTGTGATGCACACACATGTAGCGGAAAGCCAAAACCTTTCTCCAGAGGTCGACTTGCTAGGACGAGTGCGTTCTACATTGTGATTTCAGTTTTGACAGTCCTTTTTGTGCTGTTTTTCTATGTCTTTATTTACTTGTATAAGAGGGGAATGAGAACTCGACCACAGGTGCTGAAGCGTCTCTCACAAAGTGGAAGAAAGAAAAAACCTTCGTAG 840 42.5 MGRRSVWVALLVFSLLLSLRPHTVSSTLPLQSLIQGSKDSASESTPEQDWNNAHEVHCSRERSRAAWKIIEEYLMPFVEKKKYKISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNVSRSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMCEGLADSCFPVDEGASASHLHEFFLRQFCDAHTCSGKPKPFSRGRLARTSAFYIVISVLTVLFVLFFYVFIYLYKRGMRTRPQVLKRLSQSGRKKKPS 279
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 19045278 19048026 + CrPI670011_05g014770.1 Cre05g1477 497990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre05g1477 279 ProSitePatterns Zinc finger C2H2 type domain signature. 115 136 IPR013087 -
Cre05g1477 279 PANTHER ZINC FINGER PROTEIN-RELATED 9 279 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g1477 Cre-Chr5:19045278 Cre06g2625 Cre-Chr6:33830538 1.20E-90 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre05g1477 - - - 0.0