Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre05g1482 ATGCCAAGCGTGGCTGTGAAGCTCTACAGCGTCTTCTTCAAGTTTCTCTTGAAGCATCGTTTGCAGAATCTGATCCAAGCTCCACTTGACGAATCGAGCCCTTTTGGAGTCACATCTCGACCCGAAGAAACGGTTGCTTCCGCTAATCCTTTGTTCACCGACGGCGTCGCTACCAAGGATATCCACATCGATCCGTTTACATCTCTGAGCATTCGGATCTTCCTCCCTGAATCTGCTCTTACTCCGCCTGAAACCGACTCCAAACCCTCTTCCAAATCGTCCAAGCCTAAACCTAAACGGTCCAATCAAGATGCTCAAACCGATCTTGTTAATCACAATGTGAATAATGTACAACAGTACCCTTCTCGTCGAAATAGCTATGGTCCTTCGGGAAATACCAGGGAAGAACTGCGGGGTAGTAGATTAGGGGGTTACAGTAATGAAATGGAGGGGTTGAATTTGATTCAAGGCCCTGCCCCTGGTGGCGTTTACAGAGGCTATGCGCCGGTGACGGAGAATAGTCGAAGGTTGCCGGTGATGTTGCAATTTCATGGCGGGGGGTGGGTTAGTGGGAGCAATGATTCGGCGGCCAATGATTTCTTTTGCCGGAGGATCGCAAAATTGTGCGATGTTATTGTCGTTGCCGTCGGGTATCGGCTTGCACCGGAGAACCGATTTCCGGCTGCGTTTGAGGATGGATTGAAGGTGTTGAATTGGTTGGGTAAGCAGGCCAATTTGGCCGAGTGCAGCAAGTCTATGGGGAATACCAAAGGCAATGGCAATGAGTTTAAGAAATCGGATAATCATAGGCATATTGTTGACACATTTGGTGCGTCAATGGTAGAGCCTTGGTTGGCAGCCCATGGAGACCCAACAAGATGTGTTCTTCTTGGGGTTAGCTGTGGAGCAAATGTTGCAGATTATGTGGCTCGAAAGGCTGTGGAGGCCGGTAAGCTCTTGGACCCTGTCAAGGTTGTTGCCCAGGTTCTCCTGTACCCGTTTTTCGTTGGGAGTGTCCCCACTCATTCAGAGTTGAAGCTGGCCAATTCGTATTTTTACGACAAAGCTATGTGCCTTCTTGCTTGGAAGCTATTCCTACCCGAGGAAGAGTTTAGTCTTGACCATCCAGCTGCAAACCCCCTTGTTTCTGGTAGAGAAGGCCCACCTCTAAAGCTCATGCCACCAACGCTGACAGTTGTGGCTGAACTCGACTGGATGAGAGACCGAGCCATAGCTTACTCTGAAGAACTTCGAAAGGTAAATGTCGATGCACCTGTTCTTGACTACAAGGATGCAGTGCATGAATTTGCGACCCTCGATATTCTTCTCAAGACACCTCAAGCCCAAGCTTGTGCAGAGGACATTGCCATCTGGGTCAAAAAATATATTTCACTACGAGGCCACGAGTTCTCTTATTGA 1419 48.91 MPSVAVKLYSVFFKFLLKHRLQNLIQAPLDESSPFGVTSRPEETVASANPLFTDGVATKDIHIDPFTSLSIRIFLPESALTPPETDSKPSSKSSKPKPKRSNQDAQTDLVNHNVNNVQQYPSRRNSYGPSGNTREELRGSRLGGYSNEMEGLNLIQGPAPGGVYRGYAPVTENSRRLPVMLQFHGGGWVSGSNDSAANDFFCRRIAKLCDVIVVAVGYRLAPENRFPAAFEDGLKVLNWLGKQANLAECSKSMGNTKGNGNEFKKSDNHRHIVDTFGASMVEPWLAAHGDPTRCVLLGVSCGANVADYVARKAVEAGKLLDPVKVVAQVLLYPFFVGSVPTHSELKLANSYFYDKAMCLLAWKLFLPEEEFSLDHPAANPLVSGREGPPLKLMPPTLTVVAELDWMRDRAIAYSEELRKVNVDAPVLDYKDAVHEFATLDILLKTPQAQACAEDIAIWVKKYISLRGHEFSY 472
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 19128196 19131271 - CrPI670011_05g014820.1 Cre05g1482 497995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre05g1482 472 Gene3D alpha/beta hydrolase 35 467 IPR029058 -
Cre05g1482 472 MobiDBLite consensus disorder prediction 79 143 - -
Cre05g1482 472 SUPERFAMILY alpha/beta-Hydrolases 164 463 IPR029058 -
Cre05g1482 472 Pfam alpha/beta hydrolase fold 180 437 IPR013094 GO:0016787(InterPro)
Cre05g1482 472 PANTHER ARYLACETAMIDE DEACETYLASE 47 441 IPR050466 -
Cre05g1482 472 MobiDBLite consensus disorder prediction 103 133 - -
Cre05g1482 472 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 180 196 IPR002168 GO:0016787(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g1482 Cre-Chr5:19128196 Cre08g0149 Cre-Chr8:3251531 6.90E-25 dispersed
Cre05g1482 Cre-Chr5:19128196 Cre06g0801 Cre-Chr6:1375036 6.90E-25 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre05g1482 - - - 0.0