Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre05g1566 ATGCGATGTTTGATTTTTCACACACCCTTTTGGTTGTTTTTTGTGTTGGTGTCCAATTTCAAGCTCTGTTTTTCACAAGATTACACCACTGGCGACTCTCTGCCTGCGGCGGCGGCGCCGCCGGAGCAAAATACATGTAATGGGATTTTCTTAACCTACACGTTCTTTTCAAGGGAAAAAGAATTTCCCCATGTGAAGAATGTTTCTGCTCAGGCTTGGGCGTTCAGAGCTCAGGCCACCGTGCTGAACGCCGGCGCGACGGAGCTGGACGCTTGGAAGATGTATATTGGGTTTCAACATAGAGAGATTTTAGTGTCGGCGGCTGGTGCGGTGTTGGGGGACGGTTCGGATTTCCCCGCCGCCGTCGGGAAAGGGGTGATCTTAGCTGGATACACACAAGCGGACTTGAAAACCGCCATACAAACCGCCGGAGATTATAATCAAATGCAGGTGACAATTGATATCACCGGAACCCAATTCGGCGTGAAGAAGAATGGAATTCCGATGCCGAAGACAATTCGCCTTGAAAATGAAGGCTTTAAGTGTCCGCCGCCTCGTCGTCATCGCAACAAAAGTTATATGCATGTTTGCTGCAAGAAAGACCCAAAATTCAAGCAAAAACCACCAAAGAAGACCAAGTTTTTACCTCGACAGATCGGCGATCTCTCGCTCACCTACGACGTCATCCAAGCTTATGGGAACAACTATCTTGCACAAGTCACCATTGACAACAACAACCCTCTCGGCCGCCTCGACCATTGGAACTTAACTTGGGAATGGATGAGAGGAGAATTCATTTCCACCATGAGAGGAGCTTACACTCACAAAATTGACTACTCGGACTGCATCTTTGGCCCTCAAGGCCAATACTATCAAGATTTTGACTTCTCCCAAATCATGAATTGTGAGAAGAACCCCATCATCGCCGACCTCCCTTCCGATCGAGCCAACGATTCCAAGGTCGGAAAGTTACCCTTCTGTTGCAACAACGGCACCATCTTACCGCCACTGATGGATCAAAGCAAAGCAAGGTCCATTTTTCAGCTCCAAGTCTATAAGCTTCCTCCTGACTTCAACAGAACAGCCTTGTACCCTCCTCAAAAATGGAAGATCAACGGCATTCTTAACCCCAATTACAAATGTGGAGCTCCTATTAGAGTTGATCCAACACAATTTCCTGACTCAACTGGACTTCAATCCATAACCACAGCCATTGCAAGTTGGCAAGTGGTTTGCAATATTACTACTCCAAAACCCAAACAATCAAGATGTTGTGTTTCTTTCTCTGCTTATTATAATGACTCTGTTATCCCTTGCAATACTTGTGCTTGTGGATGTGATCAAACTCAAACTTGCGACCCAAATTCTTCCCCATTGCTTCTTCCACCAGAGGCCCTTTTAGTTCCATTTGACAATAGAACTTTAAAGGCAAAAGCTTGGGCCAAAATCAAACACTTTCCAATTCCAAAGAAACTCCCTTGTCCTGACAATTGTGGGGTTAGTTTAAATTGGCATATAAACTCAGATTATAACAGTGGTTGGACAGCTAGAATTACCCTTTTCAATTGGGAAGAATACCCTTTTGAGGATTGGTTTGCTGCTGTTCAATTGGATAAAGCTGCTAAAGGCTATGAGAATGTCTACTCTTTCAATGGGACTAAACTCCCACCAGATATGATCAAGAACACCATCTTGTTCCAAGGATTGGAAGGTCTTAATTACCTGATGGGGGAGATGAATGGGACGGACCCGAGATTCGATCCACGAGTACCGGGAAAGCAACAATCAGTAATCTCTTTCACTAAGAAGAATTTGAGGAACCTCAATATAAAGGAAGGAGATGGATTCCCTTCAAAGGTTTATTTCAATGGAGAAGAATGTGCACTTCCTCCTCATATTCCTTTAGGAAATGGTGCTGCTCATAGCCTCCATGTCAGCTCTGAACCTTTAATGCTGCTGCTCACAGTTATGGTTTTTTTCATTCTCTTCATCGATGGCTTTCATTGA 2007 44.69 MRCLIFHTPFWLFFVLVSNFKLCFSQDYTTGDSLPAAAAPPEQNTCNGIFLTYTFFSREKEFPHVKNVSAQAWAFRAQATVLNAGATELDAWKMYIGFQHREILVSAAGAVLGDGSDFPAAVGKGVILAGYTQADLKTAIQTAGDYNQMQVTIDITGTQFGVKKNGIPMPKTIRLENEGFKCPPPRRHRNKSYMHVCCKKDPKFKQKPPKKTKFLPRQIGDLSLTYDVIQAYGNNYLAQVTIDNNNPLGRLDHWNLTWEWMRGEFISTMRGAYTHKIDYSDCIFGPQGQYYQDFDFSQIMNCEKNPIIADLPSDRANDSKVGKLPFCCNNGTILPPLMDQSKARSIFQLQVYKLPPDFNRTALYPPQKWKINGILNPNYKCGAPIRVDPTQFPDSTGLQSITTAIASWQVVCNITTPKPKQSRCCVSFSAYYNDSVIPCNTCACGCDQTQTCDPNSSPLLLPPEALLVPFDNRTLKAKAWAKIKHFPIPKKLPCPDNCGVSLNWHINSDYNSGWTARITLFNWEEYPFEDWFAAVQLDKAAKGYENVYSFNGTKLPPDMIKNTILFQGLEGLNYLMGEMNGTDPRFDPRVPGKQQSVISFTKKNLRNLNIKEGDGFPSKVYFNGEECALPPHIPLGNGAAHSLHVSSEPLMLLLTVMVFFILFIDGFH 668
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 23716397 23720013 + CrPI670011_05g015660.1 Cre05g1566 498079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre05g1566 668 PANTHER COBRA-LIKE PROTEIN 7 11 660 - -
Cre05g1566 668 Pfam COBRA-like protein 236 415 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g1566 Cre-Chr5:23716397 Cre10g0772 Cre-Chr10:7555809 8.70E-292 dispersed
Cre05g1566 Cre-Chr5:23716397 Cre06g2413 Cre-Chr6:32019750 3.90E-34 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre05g1566 - - - 0.0