Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre05g1573 ATGATCTCTGCTGTGAAACAGTCTTCTAGGGGTATCCATTGCTCTGATGGTATTATTCGGAGCAAAATCTCGGTTCCCTCTCAGCGATCCTCGTTTCTTCCACCTCTTCCGGTGCAAAAACCTCGAAACTCCGCTGTTTCTTTTCATAAGGCTGTACATATTTCTTCGCTTGAGAATTTTGGATCACTTCGGGTTCGTAAAGCTAATCTGATCAAATGTGAAGCTTACGAGGCTGAGCGATCGCAGCCGATCGAATCGAGCATTGAGTTGCCGAAAAGTCAGGTCCCTTCTGAGGCCGCGAAGAAGGTGAAAATTGGATCCTACTTCGCTCTTTGGTGGGCTTTGAACGTGGTTTTCAATATCTATAACAAGAAGGTGTTGAACGCTTACCCATATCCATGGCTGACCTCGACTCTGTCGCTTGCCGCTGGATCTCTGATCATGTTGATCTCATGGATGACGAGAATTGCCGAGGCTCCCAAAACCGACTTCGAGTTTTGGAAGTCTTTGTTCCCTGTTGCTGTTGCCCATACAATTGGACATGTTGCTGCAACCGTGAGCATGTCCAAGGTTGCAGTTTCATTCACTCACATCATCAAGAGTGGTGAACCTGCTTTTAGTGTATTGGTTTCGAGGTTCTTGTTGGGTGAGACCTTCCCACTTCCTGTTTACTTGTCGCTCCTCCCAATCATCGGTGGGTGTGCTCTCGCTGCTGTGACCGAGCTCAACTTTAACATGACGGGTTTCATGGGTGCCATGATATCAAACTTGGCATTTGTATTCCGTAACATATTTTCGAAGAGAGGCATGAAAGGAAAATCTGTTAGTGGGATGAACTACTATGCATGTTTATCAATTTTGTCTTTGTTACTCTTGACGCCATTTGCATTTGCTGTGGAGGGACCAGAATTGTGGGCTGCTGGATGGCAAACAGCAGTTTCTCAAATTGGACCTCATTTCGTTTGGTGGGTTGCAGCACAAAGTATATTCTACCATCTCTATAATCAGGTGTCTTACATGTCCTTGGATGAGATCTCTCCCTTGACATTTAGCATTGGAAACACCATGAAACGTATATCAGTCATAGTTTCTTCCATCATCATCTTCCGAACACCTGTGCAGCCAGTCAATGCTCTCGGAGCTGCCATTGCAGTTCTTGGAACCTTCATATATTCTCAGGCAAAGCAATGA 1191 45.42 MISAVKQSSRGIHCSDGIIRSKISVPSQRSSFLPPLPVQKPRNSAVSFHKAVHISSLENFGSLRVRKANLIKCEAYEAERSQPIESSIELPKSQVPSEAAKKVKIGSYFALWWALNVVFNIYNKKVLNAYPYPWLTSTLSLAAGSLIMLISWMTRIAEAPKTDFEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYLSLLPIIGGCALAAVTELNFNMTGFMGAMISNLAFVFRNIFSKRGMKGKSVSGMNYYACLSILSLLLLTPFAFAVEGPELWAAGWQTAVSQIGPHFVWWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFRTPVQPVNALGAAIAVLGTFIYSQAKQ 396
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 24232818 24235854 + CrPI670011_05g015730.1 Cre05g1573 498086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre05g1573 396 Pfam Triose-phosphate Transporter family 104 392 IPR004853 -
Cre05g1573 396 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 104 395 IPR004696 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cre05g1573 396 PANTHER SOLUTE CARRIER FAMILY 35 98 395 IPR050186 GO:0005794(PANTHER)|GO:0015120(PANTHER)|GO:0015297(PANTHER)|GO:0071917(PANTHER)
Cre05g1573 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 146 239 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre04g1827 Cre-Chr4:36055411 Cre05g1573 Cre-Chr5:24232818 9.00E-156 dispersed
Cre05g0332 Cre-Chr5:3069926 Cre05g1573 Cre-Chr5:24232818 6.20E-86 dispersed
Cre05g1573 Cre-Chr5:24232818 Cre05g2545 Cre-Chr5:36733977 1.20E-62 dispersed
Cre05g1573 Cre-Chr5:24232818 Cre10g0767 Cre-Chr10:7485072 1.20E-184 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre05g1573 K15283 - csv:101220046 725.702