Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre05g1650 ATGAATCAAACTTCTAACCTTGAGCTTTTGTCCAACAACGAAATTCCGCCTTCTTTCCAACGCGTTTGGTCAAATGTTTGTAACGTCGCCCAATTCTTCGACCTTCTTTTGGTGGATCTGGTCAGAATCGGAGACCCATTGGAGGCCTTTCCACTACGCTTACTTTTGATTTTCTGTCAAAAATGGGATTGCATTATGCGATTCTGTTTCTTTCAAGGGTTTTCTTCTTGCCCTTTTCCCCAATTCTTTCTCGGATTTTGTTTTGATCATTGGGATTCGTCATCTTCCAGCTATGTTTTGCGATTTTTATCACAAATTCTTCTTGGGTTTGCTCAGGGATTTTTGTTTACTTGTTGTCTTTTGACGTTCTGGGATTTCGAGGCAACTTGCTTGAAGGACCACGAGGAAGAGGAACTGATTCTGAGTCAACTAGCTGACCCAATTACTGGGGATGTCAACACAGAGATGGCTGAGCTGTTACTTGTTAAGTGCAACTTGGATTTGTTTCAGTTAAAGGAAGCTGCAGATGGTACTGACCTATGCTTTGAAGAAAGACCTGGAAGCAAAAATGGAATTAATTTTGAATGTCGGATGTTGACAAAAGAGAAAACAAACAGAATGCTAAGGGCCATGCATCCCCAGATGAAGCAGACTCTTTTAGATTGTTTAAGAAAGAATTTTCATGTCTCTGGGAAAGACTACAACTCTGAAGCTTGGTACACCAGGTATCTAGAGTCATTGTTTTTAATGCCTGGTAGTCTTAGAAGGAAGTTAAGTTCTAGATGGCTTCGAAGTTCTAAAGAAGTGCCTGCTCCGGCACCTGAATCTTCAGCAGATGAAAAACCTTCAAGAAAAGCTTCTAGCACAAGTGGTCAAAAAGAAAAGAAATCTAATAATCAACAAACAGTCATCATCGCTGTTGTTGTAACAGCAACAGTGACTTTTATTATTGTAGCTCTGCTATTTTTATGCTATAATAAGAGTGGTTCCAGAGTGAAGCAAAATGATGAAAATCATGAAAGGCCTCTCCTAAGCTTGAGTTTAAGTTCTTCGCCCAAATATTCTGCCTTTGGGAATTCTCTTAAGGATGACAAGTTCATGAGTCAATCATCTAGCTTGAGTCACCACCAGAGAGCTCCATCTTTGGATGGTAGCCTGCACATTGTCTCTGATGGTGCACGTACTTCAATGCAGGGACCTCCATCTTTTGGAGCTACTGGAATTCCGAATAATTCATCTTTTGGATCAACAAATATGGCTGGCAGTACTAAGGGTTTGGTGCCACCTCCTCCAGGAGCAGTACCAGTCACCCCAGAAATCATACCTCCTTTGAAGCCTCCTCCTGGCAGGGCTGTTCCCCTGCCTCCTGAACGCCCTTCGTCTTTTAAGCCTCCGTCCAACATGGCTAGTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTGCTGCAGCAGCAGCACCACCACCACCAAGACCTCCTGGAAATTCATGTCGCCCTCCAGGACCTCCTCCACCTCCACCACCTGCACCAGGCAAAGCAGGCCCCCGCCCACCACCACCTCCCAAAAGTGGTATTGCTCCTCCTCGGCCACCTCCATTAGCACCCAAAGGTGCAAATCCACCTCGACCTCCAAAGCCTTTTGCTTCAGGTGATGATGATATGGACGAATCAGGTGTTCCCAAAGCCAAATTGAAACCATTTTTCTGGGACAAAGTTCTTGCAAACCCCGACCATTCCATGGTCTGGCATCAGATAAAAGCAGGGTCTTTCCAATTCAACGAGGAGATGATAGAAACTCTTTTTGGATATACGCCTGTAGATAAAACCAAAACTGAGGGCAAGAAGGAGTCATCATCACAAGATCCTGTACAGCAGTACATTCAGATCATTGATTCAAAGAAAGCGCAAAATCTTTCCATTCTTTTGCGAGCACTAAATGTGACAAAAGAAGAAGTCTGTGATGCGCTTCATGAAGGGACTGAACTTCCTTCTGAACTTCTTGAGAACTTACTGAGGATGGCACCAACTCCAGAAGAAGAACTCAAGCTTAGACTGTTTAGTGGGGAACTTTCTCAACTTGGAAATGCTGAGCGTTTCCTTAAATCTTTGGTTGATATCCCATTTGCTTTCAAAAGGTTGGAATCGCTGCTTTTCATGGGCACTCTTCAGGAGGACATCACCATCACTAAAGAGTCCTTTGCTAATTTGGAGGTTGCTTGCAAGGAACTTCGGAGCAGCAGGTTGTTCCTCAAACTTCTAGAAGCTGTTCTAAAGACGGGCAATCGGATGAACGATGGGACTTTTCGAGGTGGTGCACAAGCATTCAAATTGGACACTCTTTTAAAATTGTCGGATGTGAAAGGAAAAGATGGCAAGACTACGTTATTGCACTTTGTAGTTCAGGAGATAATTCGCACAGAAGGGATAAGAGCTGTTCGGAATGCCACAGGAAGCCAGAGCTTCTCAAGCACCTCATCAAAGGATCTGCTGGATGGATCTCCTAACGACCCCGAGGAGCATTACCGTACCTTGGGTCTTCAGGTTGTCTCGGGGCTGAGTGGTGAACTTCAGAATGTGAAGAAAGCAGCAACCATTGATGCAGATGCGTTGACTGGAACTGTTTCCAAACTTGGCCATGCACTGTTAAAGACAAGAGACTTTCTGAACAAAGACATGCAGGGTTTAGGTGAAGAGAGCCCATTTCATGATGCACTGAAAGTCTTTGTGCAGAGTGCTGAGGTTGATATCATGGCCCTCCTGGAAGAAGAAAAAAGAATCATGGAGTTGGTGAAAAGCACGGGCGACTACTTCCATGGAAATGCAGGGAAGGACGAGGGTTTACGGTTGTTTGTAATCGTACGAGATTTCTTGATAATGATAGATAAGACGTGCCGAGAAATAAAGGATGCACAGAAAAAGCAAGCGAAGGGACACAGAAAGGCAGCGTCGTCTTCTGATATCCATCACCCCCTTTCGTCGTCTTCTGATATCCATCACCCCCTTTCGTCGTCTTCTGATATCAATCACCCCCCTTCGTCATCTACCGATACCAGTCACCCCCCATCGTCGTCTACCGATACCAATCACCCCCCATCGTCGTCTACTGATACCAATCACCCCCCATCGTCATCTACCGATACCAATCACCCCCCTTCGTCGTCTACCGATACCAATCACCCCCCTTCGTCGTCTACTAATATCAATCACCCCCCTTCAACTACAGCTTCTGATCTACGACACCCCCCTTCTCCTGATTTGAATCAGCTGATTTTCCCAGCAATTATTGATCGTCGGATGGGCAACTCAAGTTCAGACGATGATGATGAAAGTCCGTAG 3351 45.33 MNQTSNLELLSNNEIPPSFQRVWSNVCNVAQFFDLLLVDLVRIGDPLEAFPLRLLLIFCQKWDCIMRFCFFQGFSSCPFPQFFLGFCFDHWDSSSSSYVLRFLSQILLGFAQGFLFTCCLLTFWDFEATCLKDHEEEELILSQLADPITGDVNTEMAELLLVKCNLDLFQLKEAADGTDLCFEERPGSKNGINFECRMLTKEKTNRMLRAMHPQMKQTLLDCLRKNFHVSGKDYNSEAWYTRYLESLFLMPGSLRRKLSSRWLRSSKEVPAPAPESSADEKPSRKASSTSGQKEKKSNNQQTVIIAVVVTATVTFIIVALLFLCYNKSGSRVKQNDENHERPLLSLSLSSSPKYSAFGNSLKDDKFMSQSSSLSHHQRAPSLDGSLHIVSDGARTSMQGPPSFGATGIPNNSSFGSTNMAGSTKGLVPPPPGAVPVTPEIIPPLKPPPGRAVPLPPERPSSFKPPSNMASPPPPPPPPPPPPPPPPAAAAAPPPPRPPGNSCRPPGPPPPPPPAPGKAGPRPPPPPKSGIAPPRPPPLAPKGANPPRPPKPFASGDDDMDESGVPKAKLKPFFWDKVLANPDHSMVWHQIKAGSFQFNEEMIETLFGYTPVDKTKTEGKKESSSQDPVQQYIQIIDSKKAQNLSILLRALNVTKEEVCDALHEGTELPSELLENLLRMAPTPEEELKLRLFSGELSQLGNAERFLKSLVDIPFAFKRLESLLFMGTLQEDITITKESFANLEVACKELRSSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLSDVKGKDGKTTLLHFVVQEIIRTEGIRAVRNATGSQSFSSTSSKDLLDGSPNDPEEHYRTLGLQVVSGLSGELQNVKKAATIDADALTGTVSKLGHALLKTRDFLNKDMQGLGEESPFHDALKVFVQSAEVDIMALLEEEKRIMELVKSTGDYFHGNAGKDEGLRLFVIVRDFLIMIDKTCREIKDAQKKQAKGHRKAASSSDIHHPLSSSSDIHHPLSSSSDINHPPSSSTDTSHPPSSSTDTNHPPSSSTDTNHPPSSSTDTNHPPSSSTDTNHPPSSSTNINHPPSTTASDLRHPPSPDLNQLIFPAIIDRRMGNSSSDDDDESP 1116
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 27306911 27313844 + CrPI670011_05g016500.1 Cre05g1650 498163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre05g1650 1116 ProSiteProfiles Formin homology-2 (FH2) domain profile. 559 991 IPR015425 -
Cre05g1650 1116 MobiDBLite consensus disorder prediction 976 1093 - -
Cre05g1650 1116 SUPERFAMILY Formin homology 2 domain (FH2 domain) 508 983 - -
Cre05g1650 1116 MobiDBLite consensus disorder prediction 428 552 - -
Cre05g1650 1116 PANTHER FORMIN-RELATED 507 1112 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Cre05g1650 1116 MobiDBLite consensus disorder prediction 392 423 - -
Cre05g1650 1116 Pfam Formin Homology 2 Domain 565 964 IPR015425 -
Cre05g1650 1116 PRINTS Proline rich extensin signature 449 465 - -
Cre05g1650 1116 PRINTS Proline rich extensin signature 426 447 - -
Cre05g1650 1116 PRINTS Proline rich extensin signature 488 513 - -
Cre05g1650 1116 PRINTS Proline rich extensin signature 468 485 - -
Cre05g1650 1116 MobiDBLite consensus disorder prediction 392 564 - -
Cre05g1650 1116 MobiDBLite consensus disorder prediction 820 836 - -
Cre05g1650 1116 MobiDBLite consensus disorder prediction 265 297 - -
Cre05g1650 1116 MobiDBLite consensus disorder prediction 820 841 - -
Cre05g1650 1116 Gene3D Formin, FH2 domain 564 994 IPR042201 -
Cre05g1650 1116 MobiDBLite consensus disorder prediction 991 1086 - -
Cre05g1650 1116 SMART it6_source 559 979 IPR015425 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g1167 Cre-Chr2:10808156 Cre05g1650 Cre-Chr5:27306911 7.40E-156 dispersed
Cre05g1650 Cre-Chr5:27306911 Cre07g0601 Cre-Chr7:3841222 9.60E-102 dispersed
Cre05g1650 Cre-Chr5:27306911 Cre06g2459 Cre-Chr6:32402265 3.30E-25 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre05g1650 K28090 - csv:101213072 926.006