Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre05g1675 ATGCTCAAAAAGACAAAAATGGCAAATGCTTCACTAACTCTGTTTCTGTCTCTGTCTCTGTCTCTGTTTCTCTTCTCTTCACCGTCTGTGGCTGTTGATTTCATAATTTCCTCACAAAACCTCACCCATGGCGCCACTCTTATCTCCGCAAAAGAATTTTTTGAACTGGGTTTCTTCAGCCCAGGAAATTCCACCAACCGTTACTTGGGCATTTGGTACAAAATCATCCCAGTTCGTACAATCGTCTGGGTCGCCAACAGAGAAAACCCCATCACTAATTCTTCCGCTGCTGTCGTTCTCAAAATCAACACCACCACCAGCGATCTCCTCCTTTTTGAGAACGACGCCGTTGTTTGGGTTGGAAAATCGTTGAAACCAGTAAAAACCCCCAAACTACACCTCTTAGACAATGGAAATCTGGTGTTGAAAGACGCTGAATCAGAGAAAATTTCATGGCAAAGCTTCGATTATCCAACAGATACATTACTTCCCGGAATGAAACTCGGATGGGACTTCGAAAATAGAATCCAACGCCGATTATCCGCTTGGAAATCCTCCGATGACCCATCTCCAGGGAGTTTAACGATGGAAATGATGAACACAAACTACCCAGAACCAGCGATGTGGAATGGGTCGAAAGAGTTCATGAGAAGCGGACCATGGAACGGCCTTCAATTCAGCGCAAAACCCACATCGGCTTTACCGATTTTAGTGTACAGCTATGTAAACAACAAATCCGAGCTCACTTACAGCTACGAGCTCATAAACTCTTCGTTAATCGGAAGAATGGTGTTGAATCAAACGCTATTCAGAAGAGAAGCTTTGTTATGGTCTGCATCGGAGAATATTTGGAAGCTGTATGCGACTATGCCGAGGGATTACTGCGATACTTACGGGCTTTGTGGTGCGTTTGGGAGCTGTGACATTGAGCAAGTGCCTGCTTGTCAATGTCTAAGAGGGTTTCATCCTAAAGTACAAGAGAAATGGAATTTGATGGATTATACTGAAGGGTGTGTGAGGAATAAGGCTTTGAATTGTTCTGATAAAACTGGGTTTGCAAAGCTTCCGGGGTTGAAATTGCCTGATACAAAGCAGTCTTGGGTTAATGAAAGTATGAGTTTGAATGAATGTAGAGATAAGTGTTTGAGGAATTGTTCTTGTGTGGCGTTTGCTAATACTGATATTAGAGGATCAGGGAGTGGTTGTGCTATTTGGTTTGGGGATCTTGTTGATATCAAAGTTGTTCGAAAAGGAGGCCAGGATTTGTATGTTAGAATGTTGGCTTCTGAATTGGAGACAAAGAAGACGAGTTCCGTTGTCGTCGGCGTTATCGTCGGAGCGGCGATTCTGGTGATTGCTGGTCTGGCTTTGATTGGGTTTTACCTTATTAGAAGCAGGAGGAGAAGTCTCGAAGGTGTAGGCAAGGATCTGGAAGGGCAAGAAGAAGATTTGGAGCTCCCAATAGTCGACTTAACAACAATATCTAATGCCACAGACAATTTTTCGAACTCCAACAAGCTTGGAGAAGGTGGTTTTGGTGCAGTCTTTCGGGGTAGACTTGGAGATGGACAAGAAATTGCAGTTAAGAGACTTTCTAGCTATTCAAGACAAGGGACTGATGAATTCAAGAATGAAGTGATACTCATTGCCAAACTTCAACATAGAAATCTTGTAAAACTTTTGGGTTGTTGCATACAAGGAGAGGAAAAGATGTTGATTTATGAGTACATGCCTAATAAGAGTTTGGACTCCTTCATTTTTGATCCTGCTAGAAAGAAGCTTTTGGATTGGTCGAAAAGATTCAATATCATATGCGGAATAGCTCGAGGGATTCTTTACCTTCATCAAGATTCGAGATTGAGGATTATACATAGAGATTTAAAAGCAAGCAATGTCTTGCTTGATATTGACATGAATCCCAAAATCTCGGATTTTGGAATGGCTAGAACGTTTGGGGGGGACCAAACCGAAGGAAATACTAGGAGAGTGGTCGGAACATATGGGTATATGGCACCAGAGTACGCCATTGATGGGCAATTTTCCATCAAGTCAGACGTCTTCAGTTTTGGAATATTATTGTTGGAAATCATAAGTGGAGAGAAGAATAGAGGGTTTTTTCGTCCTAACCATGCTCTAAACCTGATTGGACATGCATGGAAGTTATGGAATGAAGGAAAGCCATTAGAGTTGATTGATGCAACCATTGGAGAATCTTATGCTCTATCTGAAGTGTTGAGATGCATTCATGTTAGCCTCTTGTGCTTGCAACAACTTCCCGAGGATAGACCAACCATGTCAAATGTAGTTCTAATGCTAAGTAGTGAGAGCTCATTGCCACAACCAAAACAACCAGGATTTTACATGGAAAGAGATTCTCTTGAAGCATTTTCTCTTGATGGCAAGAATGAATCTTCTACTACCAATGAATTAACCATTACCCTCTTGGAGGCTAGATAA 2457 42.0 MLKKTKMANASLTLFLSLSLSLFLFSSPSVAVDFIISSQNLTHGATLISAKEFFELGFFSPGNSTNRYLGIWYKIIPVRTIVWVANRENPITNSSAAVVLKINTTTSDLLLFENDAVVWVGKSLKPVKTPKLHLLDNGNLVLKDAESEKISWQSFDYPTDTLLPGMKLGWDFENRIQRRLSAWKSSDDPSPGSLTMEMMNTNYPEPAMWNGSKEFMRSGPWNGLQFSAKPTSALPILVYSYVNNKSELTYSYELINSSLIGRMVLNQTLFRREALLWSASENIWKLYATMPRDYCDTYGLCGAFGSCDIEQVPACQCLRGFHPKVQEKWNLMDYTEGCVRNKALNCSDKTGFAKLPGLKLPDTKQSWVNESMSLNECRDKCLRNCSCVAFANTDIRGSGSGCAIWFGDLVDIKVVRKGGQDLYVRMLASELETKKTSSVVVGVIVGAAILVIAGLALIGFYLIRSRRRSLEGVGKDLEGQEEDLELPIVDLTTISNATDNFSNSNKLGEGGFGAVFRGRLGDGQEIAVKRLSSYSRQGTDEFKNEVILIAKLQHRNLVKLLGCCIQGEEKMLIYEYMPNKSLDSFIFDPARKKLLDWSKRFNIICGIARGILYLHQDSRLRIIHRDLKASNVLLDIDMNPKISDFGMARTFGGDQTEGNTRRVVGTYGYMAPEYAIDGQFSIKSDVFSFGILLLEIISGEKNRGFFRPNHALNLIGHAWKLWNEGKPLELIDATIGESYALSEVLRCIHVSLLCLQQLPEDRPTMSNVVLMLSSESSLPQPKQPGFYMERDSLEAFSLDGKNESSTTNELTITLLEAR 818
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 27974467 27978685 - CrPI670011_05g016750.1 Cre05g1675 498188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre05g1675 818 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 189 IPR036426 -
Cre05g1675 818 SMART blect_4 38 158 IPR001480 -
Cre05g1675 818 PIRSF SRK 4 818 IPR024171 GO:0004674(InterPro)
Cre05g1675 818 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 32 786 - -
Cre05g1675 818 Gene3D Transferase(Phosphotransferase) domain 1 577 783 - -
Cre05g1675 818 ProSiteProfiles PAN/Apple domain profile. 346 427 IPR003609 -
Cre05g1675 818 Pfam S-locus glycoprotein domain 217 324 IPR000858 GO:0048544(InterPro)
Cre05g1675 818 Pfam Domain of unknown function (DUF3403) 773 818 IPR021820 GO:0004674(InterPro)
Cre05g1675 818 Pfam D-mannose binding lectin 80 184 IPR001480 -
Cre05g1675 818 ProSiteProfiles Protein kinase domain profile. 501 778 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre05g1675 818 SMART serkin_6 501 772 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre05g1675 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 345 426 - -
Cre05g1675 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 577 780 - -
Cre05g1675 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 466 576 - -
Cre05g1675 818 CDD STKc_IRAK 507 772 - -
Cre05g1675 818 Pfam Protein tyrosine and serine/threonine kinase 504 769 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre05g1675 818 SMART ntp_6 347 426 IPR003609 -
Cre05g1675 818 CDD B_lectin 41 158 IPR001480 -
Cre05g1675 818 CDD PAN_AP_plant 344 425 - -
Cre05g1675 818 ProSiteProfiles Bulb-type lectin domain profile. 32 155 IPR001480 -
Cre05g1675 818 Gene3D Phosphorylase Kinase; domain 1 472 576 - -
Cre05g1675 818 Gene3D - 29 155 IPR036426 -
Cre05g1675 818 SUPERFAMILY Protein kinase-like (PK-like) 486 772 IPR011009 -
Cre05g1675 818 ProSitePatterns Protein kinases ATP-binding region signature. 507 529 IPR017441 GO:0005524(InterPro)
Cre05g1675 818 Pfam PAN-like domain 346 412 IPR003609 -
Cre05g1675 818 Gene3D Hepatocyte Growth Factor 342 428 - -
Cre05g1675 818 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g0483 Cre-Chr2:2021305 Cre05g1675 Cre-Chr5:27974467 1.10E-142 dispersed
Cre03g0824 Cre-Chr3:7004790 Cre05g1675 Cre-Chr5:27974467 7.80E-213 dispersed
Cre03g0825 Cre-Chr3:7011824 Cre05g1675 Cre-Chr5:27974467 3.30E-192 dispersed
Cre04g1848 Cre-Chr4:36200396 Cre05g1675 Cre-Chr5:27974467 1.00E-97 dispersed
Cre04g1858 Cre-Chr4:36262618 Cre05g1675 Cre-Chr5:27974467 1.50E-179 dispersed
Cre05g1675 Cre-Chr5:27974467 Cre10g0829 Cre-Chr10:8956144 1.10E-272 dispersed
Cre05g1675 Cre-Chr5:27974467 Cre10g0828 Cre-Chr10:8941168 2.30E-270 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64149 PF07714 PK_Tyr_Ser-Thr 4.00E-48 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre05g1675 - - - 0.0