Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre05g1786 | ATGCAGGCAGATCAGACGGTGATAAGCTTGAGACCTGGTGGTGGCGGTGGCTTTCGTGGAAGCAGATTTGTTACACCTCGTTTCGATTCATCCTCCGCCGACTCTTCGTCGCTTCGTCCACATGGCGGCGCTGCTTCAATCCTCAAGACTGGCGATCTACGGTTTGAAGGTCGTGAGCGAATGCAATACACTCGAGACCAGCTTCTGCAGCTTAGGGAGGTTGCAACAGTCCCTGAGGATATCTTGAAAGTCAAACTAGAAGTTGAGTCAGAGATAGTTGGGGAGGATCAAACATGGGCCCGTGCTGAAAGCAATCAGCAATCACAATCTCAAGGTCGTTACTTTGAGGCAGACAATCGAGATTGGCGTGGTCGATCTGGACAGTTGCCCGGCTCCACAGAGGAAGGATCTTGGGAAGCAAATAAGGATTTTTCTGGACAATCTGAGTTGAGGTTCCAAGACTCGAATAATAGGAATCAAGTTTCTGGTAACCAAGGGGTCGGCACTGCACCTGCTCTCATCAAGGCTGAAGTTCCTTGGTCAGTTAGAAGAGGTAATATCTCAGATAAGGAACGAGTTTTGAAGACGGTTAAAGGTATACTGAATAAATTGACTCCAGAAAAGTTTGACATACTCAAAGGTCAACTGATTGACTCAGGAATTACATCCGCTGATATTTTGAAGGATGTTATATCGCTTATATTTGAGAAGGCCGTATTTGAGCCCACATTTTGCCCTATGTATGCACTTTTGTGCTCTGACCTCAATGAGAAGCTTCCTTCATTTCCATCCGAAGTGCCTGGAGAGAAAGATATCACTTTTAAACGTGTTCTCTTAAATATTTGCCAAGAGGCATTTGAAGGTGCTGATAACATGAGGGCAGAAATCAGGCAGATGACTAGTCCTGAGCAGGAAACGGAAAGAAGAGATAAAGAAAGAATGGTTAAGCTTCGGACTCTAGGAAACATTCGCCTGATAGGTGAGCTTCTGAAACAGAAGATGGTGCCTGAAAAGATTGTTCACCATATTGTTCTGGAGCTGTTGGGGCCTGACCCTAAAATATGCCCTGCAGAGGAGAATGTCGAGGCTATTAGTCAGTTTTTTAACACAATAGGTAAGCAACTGGATGAGAGCCCAAAATCTCGACGGGTCAATGATGTATATTTCAGCCGGTTGAAGGAGCTCACTGCAAACACCCAATTAGCACCTAGGTTGAGATTTATGGTCCGTGATGTTCTTGATTTGCGGGCCAATAACTGGGTTCCTAGACGTGAAGAGGTGAAAGCGAAAACCATCACTGAAATTCATTCAGAGGCTGAAAAGAATTTAGGGCTCCGTCCAGGTTCAATGGCAATGATGAGAAATGGCCGTAATACCGAGGCACTTGGGGGATTAAGTCCTGGTGGTTTTCCAGTTGCCCGACCTGGCTTTGGAGGTATGATGCCTGGAATGCCTGGAACCAGGAAAATGCCTGGAATGCCTGGACTTGAGTCAGACAATTGGGAAGTTCCTAGATCCCGAGCAATGCCAAGGGGCGAAACCAGAGGTCCTACTGCGCGCGGCCAGTCATCATTAACGGGCAAAACACCTTCCATTAATTCAAAATATTTACCTCAGGGAAGTGGAGGTGTAATAACAGGGAAAACAAGTGCCTTGCTACAGGGTAGTGCTGCTGCATCTCCTGCCCGACCACCGAGTTCCATGCCTGGAACTCAGCCTGTTCCTCACAACCCTAAACCAGTTGCTCCAGTTACACCTATCATATCTTCGCCTCCGAAGCCTGCAGCTCCTGCTGCATCCAATCTGGTTGATCTTCGCAAGAAAACCGTTTCGCTGCTTGAGGAATACTTCAGCGTACGGATTCTTGATGAAGCTCTACAGTGTGTAGAGGAGCTGAAATCCCCAGCTTATCACCCTGAGGTTGTTAAAGAATCTCTTACCATTGCACTTGAGAAGATTCCACCATGTGTAGACCCAGTTGTTAAGCTTCTTGAGCACTTGCTTCACAAGAATGTCTTGACTGCAAAGGATATAGGTACTGGGTGCCTTCTATATGGGTCAATGATGGATGATATCGGCATCGATCTACCAAAAGCACCAAACAATTTCGGTGAGATTCTCGGGAAGTTAATTTTGATCGGAGGTCTGGATTTCGCTGTTGTGGAGGAGATTCTTAAGAAGGTGGAAGATAACTACTTTCAAAAATCCATTTTTGGTGGTGCTATGAAGATCCTCAACTCTAGCCCTTCTGGAGAAGGAATTCTGGCAACTCAAAGCGTTGAGATCCAGGCATGTGAGACTTTACTTGCGTGA | 2313 | 46.26 | MQADQTVISLRPGGGGGFRGSRFVTPRFDSSSADSSSLRPHGGAASILKTGDLRFEGRERMQYTRDQLLQLREVATVPEDILKVKLEVESEIVGEDQTWARAESNQQSQSQGRYFEADNRDWRGRSGQLPGSTEEGSWEANKDFSGQSELRFQDSNNRNQVSGNQGVGTAPALIKAEVPWSVRRGNISDKERVLKTVKGILNKLTPEKFDILKGQLIDSGITSADILKDVISLIFEKAVFEPTFCPMYALLCSDLNEKLPSFPSEVPGEKDITFKRVLLNICQEAFEGADNMRAEIRQMTSPEQETERRDKERMVKLRTLGNIRLIGELLKQKMVPEKIVHHIVLELLGPDPKICPAEENVEAISQFFNTIGKQLDESPKSRRVNDVYFSRLKELTANTQLAPRLRFMVRDVLDLRANNWVPRREEVKAKTITEIHSEAEKNLGLRPGSMAMMRNGRNTEALGGLSPGGFPVARPGFGGMMPGMPGTRKMPGMPGLESDNWEVPRSRAMPRGETRGPTARGQSSLTGKTPSINSKYLPQGSGGVITGKTSALLQGSAAASPARPPSSMPGTQPVPHNPKPVAPVTPIISSPPKPAAPAASNLVDLRKKTVSLLEEYFSVRILDEALQCVEELKSPAYHPEVVKESLTIALEKIPPCVDPVVKLLEHLLHKNVLTAKDIGTGCLLYGSMMDDIGIDLPKAPNNFGEILGKLILIGGLDFAVVEEILKKVEDNYFQKSIFGGAMKILNSSPSGEGILATQSVEIQACETLLA | 770 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 29806691 | 29811850 | + | CrPI670011_05g017860.1 | Cre05g1786 | 498299 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre05g1786 | 770 | Gene3D | - | 602 | 758 | - | - | |
Cre05g1786 | 770 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA | 49 | 768 | IPR045208 | GO:0003729(PANTHER)|GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0016281(PANTHER) | |
Cre05g1786 | 770 | SMART | if4_15 | 194 | 419 | IPR003890 | GO:0003723(InterPro)|GO:0005515(InterPro) | |
Cre05g1786 | 770 | MobiDBLite | consensus disorder prediction | 99 | 115 | - | - | |
Cre05g1786 | 770 | FunFam | Eukaryotic translation initiation factor isoform 4G-2 | 185 | 420 | - | - | |
Cre05g1786 | 770 | MobiDBLite | consensus disorder prediction | 554 | 575 | - | - | |
Cre05g1786 | 770 | MobiDBLite | consensus disorder prediction | 99 | 140 | - | - | |
Cre05g1786 | 770 | ProSiteProfiles | MI domain profile. | 604 | 726 | IPR003891 | - | |
Cre05g1786 | 770 | SUPERFAMILY | ARM repeat | 187 | 422 | IPR016024 | - | |
Cre05g1786 | 770 | MobiDBLite | consensus disorder prediction | 1 | 44 | - | - | |
Cre05g1786 | 770 | MobiDBLite | consensus disorder prediction | 507 | 538 | - | - | |
Cre05g1786 | 770 | Pfam | MA3 domain | 605 | 717 | IPR003891 | - | |
Cre05g1786 | 770 | SUPERFAMILY | ARM repeat | 601 | 756 | IPR016024 | - | |
Cre05g1786 | 770 | MobiDBLite | consensus disorder prediction | 25 | 39 | - | - | |
Cre05g1786 | 770 | Gene3D | - | 185 | 420 | - | - | |
Cre05g1786 | 770 | Pfam | MIF4G domain | 194 | 419 | IPR003890 | GO:0003723(InterPro)|GO:0005515(InterPro) | |
Cre05g1786 | 770 | MobiDBLite | consensus disorder prediction | 517 | 538 | - | - | |
Cre05g1786 | 770 | SMART | ma3_7 | 605 | 717 | IPR003891 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre05g1786 | Cre-Chr5:29806691 | Cre06g1613 | Cre-Chr6:11772458 | 7.20E-48 | dispersed | |
Cre05g1786 | Cre-Chr5:29806691 | Cre06g2121 | Cre-Chr6:28972978 | 1.90E-282 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre05g1786 | K03260 | - | csv:101211356 | 1298.11 |