Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre05g2089 | ATGTATATTATTGTGGTTTCCGTTCTTTTTGTCGGAATCGTCTTCAAATTTGTGTATTCCAATTTATGGGTTCCGTGGAGAATTCAAATCCACTTCAAAAAACAAGGGATAACAGGGCCTTCCTACCGTCCGATCATCGGTAACGCCACCGATATCCGCCGTCTGTACAAGGAGGCGAATGCGAAACCAATTCCGCTGACCCACGATATAGTGTGTCGGGTGCTGCCTTATATTCACCGGTGGTCCGAGGAGTATGGGAAGATGTTTGTGTATTGGTTCGGGTCGAAACCGAGGTTGGCGATATCCGACCCAGAAATGATTAAGGAGGTGCTTACCAATACGGGTGGGCCTTTTAGAAAGGTCGGGTTCACCCCGGTTTCCAAGTTGCTGTTTGGAGAAGGACTTGTGGGACTCGAGGGCGAACAATGGGTCGTCCACCGAAGAATCGCAAATCAGGCTTTCACTATCGACCGTGTGAAGGGGTGGTTACCAGAGATTGCGTTGAGTGTTTGTAATGTGTTGGAGAAATGGGAAGAGATGAAGGGAGGAAGGGAGGAGTTTGAATTAGATGTCCATAAACAACTTCGTCTCCTCACAGCAGATGTAATTTCAAGAACTGCTTTTGGAAGTAATTTTGAAGAAGGCAAACGCATTTTCAATTTGCAAGAACAACAAATGCATCATTTTCTCCAGGCCGTCTCAAGTGTTTATATTCCAGGCTACAGATTTTTGCCTACCAAGGGGAATAGAGAGAGGGAGAGGCTGGAAAAAGAAACTCGTGCATCAATAAAAGCACTAGTCGAAAGTGAGAAAAATAGCAAAGAAAGGGAAAACTCAACAAATCTACTCAGCCTCTTACTGTCATCTTACAAGAACCAAAATGGGGAAATAGAAAAACTTGGAGTGGAGGAAGTTGTAAATGAATGCAAGACATTCTACTTTGCAGGGATGGAAACAACTGCCAATCTTTTAACTTGGGCCCTTTTACTACTAGCGCAGCATCAAGAATGGCAAGATCGAGCTCGACAAGAAGTCATCAATGTTTGCGGCCACAAGACACCGCCCGTGGCTGATAATCTAACTGAACTTAAACTAGTGGGTATGATAGTCAATGAAACACTTCGACTTTATCCTCCTGCGGTGATGATGATGCGACGGACAACAAAATGGTTGACACTAGGAAAGGTCAACGTGCCAGAAGGCACACAACTTCAACTTTCAATTGCTGCAATCCACCATGACACAGAGCTTTGGGGAGAAGATGCGAGCAACTTCAACCCTATGAGATTTAGTGAGCCTAGGAAGCATCTAGCTTCATTTTTGCCATTTGGATTGGGTCCAAGAATCTGTGTAGGGCAACATTTGGCTCTGATTGAGGCCAAAGTTGCATTGGCTATGATAATTCAGCGATTCTCTTTTACGATTTCCCCAACCTACACGCATGCCCCTATGATGTTTGTAAGCTTAAACCCTCAATTTGGTGTTCAACTCCTCGTTAGGAGCTTATGGAATTGA | 1515 | 44.49 | MYIIVVSVLFVGIVFKFVYSNLWVPWRIQIHFKKQGITGPSYRPIIGNATDIRRLYKEANAKPIPLTHDIVCRVLPYIHRWSEEYGKMFVYWFGSKPRLAISDPEMIKEVLTNTGGPFRKVGFTPVSKLLFGEGLVGLEGEQWVVHRRIANQAFTIDRVKGWLPEIALSVCNVLEKWEEMKGGREEFELDVHKQLRLLTADVISRTAFGSNFEEGKRIFNLQEQQMHHFLQAVSSVYIPGYRFLPTKGNRERERLEKETRASIKALVESEKNSKERENSTNLLSLLLSSYKNQNGEIEKLGVEEVVNECKTFYFAGMETTANLLTWALLLLAQHQEWQDRARQEVINVCGHKTPPVADNLTELKLVGMIVNETLRLYPPAVMMMRRTTKWLTLGKVNVPEGTQLQLSIAAIHHDTELWGEDASNFNPMRFSEPRKHLASFLPFGLGPRICVGQHLALIEAKVALAMIIQRFSFTISPTYTHAPMMFVSLNPQFGVQLLVRSLWN | 504 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 32810828 | 32812732 | + | CrPI670011_05g020890.1 | Cre05g2089 | 498602 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre05g2089 | 504 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 443 | 452 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cre05g2089 | 504 | Gene3D | Cytochrome P450 | 27 | 498 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g2089 | 504 | PRINTS | P450 superfamily signature | 315 | 332 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g2089 | 504 | PRINTS | P450 superfamily signature | 450 | 461 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g2089 | 504 | PRINTS | P450 superfamily signature | 441 | 450 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g2089 | 504 | PRINTS | P450 superfamily signature | 368 | 379 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g2089 | 504 | PRINTS | E-class P450 group I signature | 198 | 216 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g2089 | 504 | PRINTS | E-class P450 group I signature | 324 | 350 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g2089 | 504 | PRINTS | E-class P450 group I signature | 82 | 101 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g2089 | 504 | PRINTS | E-class P450 group I signature | 106 | 127 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g2089 | 504 | PRINTS | E-class P450 group I signature | 440 | 450 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g2089 | 504 | PRINTS | E-class P450 group I signature | 304 | 321 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g2089 | 504 | PRINTS | E-class P450 group I signature | 450 | 473 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g2089 | 504 | Pfam | Cytochrome P450 | 78 | 479 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g2089 | 504 | SUPERFAMILY | Cytochrome P450 | 34 | 500 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g2089 | 504 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 16 | 495 | IPR050665 | GO:0004497(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre05g2089 | Cre-Chr5:32810828 | Cre05g2091 | Cre-Chr5:32820222 | 8.90E-289 | dispersed | |
| Cre05g2088 | Cre-Chr5:32805577 | Cre05g2089 | Cre-Chr5:32810828 | 4.40E-155 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre05g2089 | - | - | - | 0.0 |