Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cre05g2089 ATGTATATTATTGTGGTTTCCGTTCTTTTTGTCGGAATCGTCTTCAAATTTGTGTATTCCAATTTATGGGTTCCGTGGAGAATTCAAATCCACTTCAAAAAACAAGGGATAACAGGGCCTTCCTACCGTCCGATCATCGGTAACGCCACCGATATCCGCCGTCTGTACAAGGAGGCGAATGCGAAACCAATTCCGCTGACCCACGATATAGTGTGTCGGGTGCTGCCTTATATTCACCGGTGGTCCGAGGAGTATGGGAAGATGTTTGTGTATTGGTTCGGGTCGAAACCGAGGTTGGCGATATCCGACCCAGAAATGATTAAGGAGGTGCTTACCAATACGGGTGGGCCTTTTAGAAAGGTCGGGTTCACCCCGGTTTCCAAGTTGCTGTTTGGAGAAGGACTTGTGGGACTCGAGGGCGAACAATGGGTCGTCCACCGAAGAATCGCAAATCAGGCTTTCACTATCGACCGTGTGAAGGGGTGGTTACCAGAGATTGCGTTGAGTGTTTGTAATGTGTTGGAGAAATGGGAAGAGATGAAGGGAGGAAGGGAGGAGTTTGAATTAGATGTCCATAAACAACTTCGTCTCCTCACAGCAGATGTAATTTCAAGAACTGCTTTTGGAAGTAATTTTGAAGAAGGCAAACGCATTTTCAATTTGCAAGAACAACAAATGCATCATTTTCTCCAGGCCGTCTCAAGTGTTTATATTCCAGGCTACAGATTTTTGCCTACCAAGGGGAATAGAGAGAGGGAGAGGCTGGAAAAAGAAACTCGTGCATCAATAAAAGCACTAGTCGAAAGTGAGAAAAATAGCAAAGAAAGGGAAAACTCAACAAATCTACTCAGCCTCTTACTGTCATCTTACAAGAACCAAAATGGGGAAATAGAAAAACTTGGAGTGGAGGAAGTTGTAAATGAATGCAAGACATTCTACTTTGCAGGGATGGAAACAACTGCCAATCTTTTAACTTGGGCCCTTTTACTACTAGCGCAGCATCAAGAATGGCAAGATCGAGCTCGACAAGAAGTCATCAATGTTTGCGGCCACAAGACACCGCCCGTGGCTGATAATCTAACTGAACTTAAACTAGTGGGTATGATAGTCAATGAAACACTTCGACTTTATCCTCCTGCGGTGATGATGATGCGACGGACAACAAAATGGTTGACACTAGGAAAGGTCAACGTGCCAGAAGGCACACAACTTCAACTTTCAATTGCTGCAATCCACCATGACACAGAGCTTTGGGGAGAAGATGCGAGCAACTTCAACCCTATGAGATTTAGTGAGCCTAGGAAGCATCTAGCTTCATTTTTGCCATTTGGATTGGGTCCAAGAATCTGTGTAGGGCAACATTTGGCTCTGATTGAGGCCAAAGTTGCATTGGCTATGATAATTCAGCGATTCTCTTTTACGATTTCCCCAACCTACACGCATGCCCCTATGATGTTTGTAAGCTTAAACCCTCAATTTGGTGTTCAACTCCTCGTTAGGAGCTTATGGAATTGA 1515 44.49 MYIIVVSVLFVGIVFKFVYSNLWVPWRIQIHFKKQGITGPSYRPIIGNATDIRRLYKEANAKPIPLTHDIVCRVLPYIHRWSEEYGKMFVYWFGSKPRLAISDPEMIKEVLTNTGGPFRKVGFTPVSKLLFGEGLVGLEGEQWVVHRRIANQAFTIDRVKGWLPEIALSVCNVLEKWEEMKGGREEFELDVHKQLRLLTADVISRTAFGSNFEEGKRIFNLQEQQMHHFLQAVSSVYIPGYRFLPTKGNRERERLEKETRASIKALVESEKNSKERENSTNLLSLLLSSYKNQNGEIEKLGVEEVVNECKTFYFAGMETTANLLTWALLLLAQHQEWQDRARQEVINVCGHKTPPVADNLTELKLVGMIVNETLRLYPPAVMMMRRTTKWLTLGKVNVPEGTQLQLSIAAIHHDTELWGEDASNFNPMRFSEPRKHLASFLPFGLGPRICVGQHLALIEAKVALAMIIQRFSFTISPTYTHAPMMFVSLNPQFGVQLLVRSLWN 504
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 32810828 32812732 + CrPI670011_05g020890.1 Cre05g2089 498602
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cre05g2089 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cre05g2089 504 Gene3D Cytochrome P450 27 498 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre05g2089 504 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre05g2089 504 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre05g2089 504 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre05g2089 504 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre05g2089 504 PRINTS E-class P450 group I signature 198 216 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre05g2089 504 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre05g2089 504 PRINTS E-class P450 group I signature 82 101 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre05g2089 504 PRINTS E-class P450 group I signature 106 127 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre05g2089 504 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre05g2089 504 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre05g2089 504 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre05g2089 504 Pfam Cytochrome P450 78 479 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre05g2089 504 SUPERFAMILY Cytochrome P450 34 500 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre05g2089 504 PANTHER CYTOCHROME P450 FAMILY MEMBER 16 495 IPR050665 GO:0004497(PANTHER)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g2089 Cre-Chr5:32810828 Cre05g2091 Cre-Chr5:32820222 8.90E-289 dispersed
Cre05g2088 Cre-Chr5:32805577 Cre05g2089 Cre-Chr5:32810828 4.40E-155 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre05g2089 - - - 0.0