Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cre05g2136 ATGGCGGTTGTCACTGATCCTCTTGCTTCCATGCAGCTTCTCGCCAATACCCTTCAGGCTCCGCCGTATGCGGCAGCCGCCGTTCTGGGTGGCGTCTCTTTAATGCTTTCGGTGTTTCTTGTCGCTGATTGTAGAAAGAAACGTCGGAAATTTCTCCCTCCAGTGCCGGCGATTCCGGGGGTGCCGCTGTTGGGAAATCTGTTGCAGTTGAAGGAGAAGAAGCCTCACATGACGTTTGCACGGTGGGCCGAGACGTACGGTCCGGTTTATTCCATAAGAACCGGCGCTTCCACTGTGATTGTTCTCAACACCGCCGAAGTTGCCAAAGAGGCTATGGTGACGAGATACGCTTCTATTTCTAGTAGAAAGCTAAGCAAAGCCCTCACCATCTTGACTGCTGATAAATGCATGGTTGCTATGAGTGATTACAATGACTTTCACAAGATGGTGAAGAGATACATATTGGCGAATGTCTTGGGGGCTAATGCTCAGAAGAAACACAGACAAAGGAGAGACACCATGATAGAGAATATTTCTAGGGAGTTGTTTGCTCATCTGAAGGATTTTCCATCAGAAACTGTTAATTTTCGAAAAATCTTCGAAGCAGAACTCTTTCGACTGGCTCTTAAAGAAACACTTGGGAAAGATGTTGAGTCGATATATGTCGATGGGCTCGGTACCACATTGCCAAGGGAAGATCTGTTTAGGGTTTTAGTGATTGATCCAATGGAGGGTGCAATTGAGGTTGATTGGAGGGATTTCTTCCCATATCTGAGATGGATTCCCAACAAGAGTGTGGAGAATAGAATAAAGAATATGGATTTTCGAAGGCGAATGACAATGAAAAGCCTACTTGAGGAGCAGAAGAAACGAATTGCAGCAGGGGAGGAAACGAATTGCTATGCTGATTTCCTGTTATCTGAAGCAAAAACACTTACAGAGGATCAGATATCGATGTTACTTTGGGAGACAATCATTGAAACCTCAGACACGACTCTGGTTGTAACAGAATGGGCTATGTATGAACTTGCAAAAGATCCGAAACGACAGGACTATCTGTATCAGCATATACTGAATGTCTGTGGATCTGCAAAGCTTACTGAAGAAAACCTGTCACAGCTTCCATATCTAACTGCTGTTTTTCATGAAACTCTTCGGAGGCATAGTCCAGTCCCGGTCGTCCCATTGCGATATGCGCACGAAGATACCCAGTTAGGCGGGTACTTTGTTCCTGCAGGGAGTGAGATCGCTGTGAACATTTACGCGTGCAACATGGACAAGAATCATTGGGAAAGCCCTGAGGAATGGAAGCCAGAGAGGTTTCTGGATGAGAAGTATGATCCAATGGATCTCCACAAAACCATGGCCTTTGGAGGAGGGAAGAGGGTGTGTGCAGGTGCTCTTAAGGCAATGCTGATAGCTTGCACAACCATTGGAAGGATGGTTCAAGAGTTTGAGTGGAGGCTAAGGGACGGGGAAGAGGACAAAGTGGACACTCTCGGCCTCACGGCTCGCAAGCTCCAGCCTCTGCACGTAGTCGTAAAGCCAAGAATCAACTAA 1560 46.67 MAVVTDPLASMQLLANTLQAPPYAAAAVLGGVSLMLSVFLVADCRKKRRKFLPPVPAIPGVPLLGNLLQLKEKKPHMTFARWAETYGPVYSIRTGASTVIVLNTAEVAKEAMVTRYASISSRKLSKALTILTADKCMVAMSDYNDFHKMVKRYILANVLGANAQKKHRQRRDTMIENISRELFAHLKDFPSETVNFRKIFEAELFRLALKETLGKDVESIYVDGLGTTLPREDLFRVLVIDPMEGAIEVDWRDFFPYLRWIPNKSVENRIKNMDFRRRMTMKSLLEEQKKRIAAGEETNCYADFLLSEAKTLTEDQISMLLWETIIETSDTTLVVTEWAMYELAKDPKRQDYLYQHILNVCGSAKLTEENLSQLPYLTAVFHETLRRHSPVPVVPLRYAHEDTQLGGYFVPAGSEIAVNIYACNMDKNHWESPEEWKPERFLDEKYDPMDLHKTMAFGGGKRVCAGALKAMLIACTTIGRMVQEFEWRLRDGEEDKVDTLGLTARKLQPLHVVVKPRIN 519
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 33167989 33170242 + CrPI670011_05g021360.1 Cre05g2136 498649
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cre05g2136 519 SUPERFAMILY Cytochrome P450 53 517 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre05g2136 519 PANTHER ENT-KAURENE OXIDASE, CHLOROPLASTIC 24 517 IPR044225 GO:0005506(InterPro)|GO:0005783(PANTHER)|GO:0009686(InterPro)|GO:0009686(PANTHER)|GO:0009707(PANTHER)|GO:0010241(InterPro)|GO:0010241(PANTHER)|GO:0016709(PANTHER)|GO:0020037(InterPro)|GO:0052615(InterPro)
Cre05g2136 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cre05g2136 519 Gene3D Cytochrome P450 45 519 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre05g2136 519 CDD CYP77_89 85 511 - -
Cre05g2136 519 FunFam Ent-kaurene oxidase 2 46 519 - -
Cre05g2136 519 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre05g2136 519 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre05g2136 519 PRINTS E-class P450 group I signature 107 128 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre05g2136 519 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre05g2136 519 PRINTS E-class P450 group I signature 83 102 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre05g2136 519 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre05g2136 519 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre05g2136 519 Pfam Cytochrome P450 59 498 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g2136 Cre-Chr5:33167989 Cre10g1760 Cre-Chr10:31998110 2.90E-53 dispersed
Cre05g2128 Cre-Chr5:33106484 Cre05g2136 Cre-Chr5:33167989 1.40E-34 proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre05g2136 K04122 - csv:101209283 976.081