Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre05g2166 ATGTCCACGAGGAGCGAACATCATACAGTCCCGCTCTCTGTGCTCCTAAAGCGTGAATTGGCGATTGAGAAGATTGAGAGACCAGAAATCTTACATGGTCAGGCGAGTCAGAGTAAGAAAGGGGAGGATTTTACATTGCTAAAGACGGAATGCGAGAGAGTGGTAGGAGATGGAGTCTCAACGTATTCGGTTTTTGGGCTTTTTGATGGACATAATGGATCTGCTGCTGCTATTTATGCTAAGGAGAATTTGTTGAACAATGTTTTAGCTGCTATTCCATCAGATCTCAACAGAGACGAATGGGTGGCAGCATTGCCAAGGGCCTTGGTTGCAGGTTTTGTGAAGACGGACAAAGATTTTCAAGAGAAAGCACAAACATCAGGAACCACTGTTACTTTCATGATTATTGAGGGATGGGTTCTCACTGTTGCTTCTGTTGGTGATTCCCGTTGCACTTTGGAATCAGCTGAAGGTGACATCTACTACTTATCAGCAGATCATAGACTAGAATGCAACGAAGAAGAGAGAGAACGTATAATTGCTAGTGGTGGTGAGGTGGGTCGGCTGAATACTGGTGGTGGTGCAGAGATTGGTCCGTTGAGATGCTGGCCTGGTGGCTTATGTCTATCACGATCAATTGGTGATATGGATGTTGGCGAGTTTATAGTGCCTGTTCCCTACGTGAAGCAAGTTAAGCTATCTTCTACTGGTGGTAGGGTTATTATTTCAAGTGATGGTGTTTGGGATGCTTTATCAGCTGAAACTGCCTTTGATTGTTGTCGGGGGATGCCAGTAGAAACTGCTGCTGCACAGATTGTGAAAGAAGCAGTACAGTCAAAGGGACTTCGAGATGATACTACATGTATTGTGATTGACATATTACCAAGGGAGAAACCATCTACTGCTTTGCCGCCACCGAAGAAGCAGGTAAAAGGAATGTTTAAATCAATGTTCCGCAAAAAGTCTTCTGAATCATCTTCTCATTTTGAGAAAGAATATAATGAGCCAGATGTTGTCGAGGAATTATTTGAGGAAGGATCGGCTATGCTGTCAGAAAGGTTAGATGCCAAGTATCCTATCTGCAACATGTTTAAGCTGTTTGTATGTGCAGTATGCCAAATTGAGATCCAACCTCGGGAGGGTATCTCCATATATGCTGGCTCATCTAACAGAGGAAAATTGCGCGCTTGGGATGGACCTTTTCTATGCTTAAGTTGCACAGAGAAGAAAGAAGCTATGGAAGGGAAAAGACCATCTGGAGATAGACACAGCAGTGGAAGTGACTAG 1287 43.9 MSTRSEHHTVPLSVLLKRELAIEKIERPEILHGQASQSKKGEDFTLLKTECERVVGDGVSTYSVFGLFDGHNGSAAAIYAKENLLNNVLAAIPSDLNRDEWVAALPRALVAGFVKTDKDFQEKAQTSGTTVTFMIIEGWVLTVASVGDSRCTLESAEGDIYYLSADHRLECNEEERERIIASGGEVGRLNTGGGAEIGPLRCWPGGLCLSRSIGDMDVGEFIVPVPYVKQVKLSSTGGRVIISSDGVWDALSAETAFDCCRGMPVETAAAQIVKEAVQSKGLRDDTTCIVIDILPREKPSTALPPPKKQVKGMFKSMFRKKSSESSSHFEKEYNEPDVVEELFEEGSAMLSERLDAKYPICNMFKLFVCAVCQIEIQPREGISIYAGSSNRGKLRAWDGPFLCLSCTEKKEAMEGKRPSGDRHSSGSD 428
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 33427449 33430846 + CrPI670011_05g021660.1 Cre05g2166 498679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre05g2166 428 Gene3D - 32 301 IPR036457 -
Cre05g2166 428 FunFam probable protein phosphatase 2C 12 32 299 - -
Cre05g2166 428 ProSiteProfiles PPM-type phosphatase domain profile. 31 293 IPR001932 -
Cre05g2166 428 PANTHER PROTEIN PHOSPHATASE 32 292 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cre05g2166 428 SMART PP2C_SIG_2 46 293 IPR001932 -
Cre05g2166 428 SUPERFAMILY PP2C-like 38 293 IPR036457 -
Cre05g2166 428 SMART PP2C_4 26 291 IPR001932 -
Cre05g2166 428 Pfam Protein phosphatase 2C 54 278 IPR001932 -
Cre05g2166 428 CDD PP2Cc 39 293 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g2166 Cre-Chr5:33427449 Cre05g2429 Cre-Chr5:35714203 7.10E-130 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre05g2166 - - - 0.0