Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre05g2221 | ATGGAAGCCATTTGGATTTGCACCAGCACCTCCAAGTTCAAAATAACATATCCATCCATGGAACCTCATACAATTCCTTGGCTCTCTCGTTTTCTCATCTCATTCTCTCTTCTCTTCACGCTCATTCTTCTTTCCAAGCTCAGAAAAGTAAACCACAGAAAACTTCCACCAACCCCACCTTCCCTTCCGGTCATCGGTCACCTTCATCTCCTCAAAGACCCTTTCCACCGAGTGCTGCACGATCTCTCCAAGCAATACGGTCCAATTCTATCCCTTTCAATCGGCTCCCGTCCGGTGGTGGTTGTCTCCTCCCCCACCGCTGTCCGTGAGTGCTTCACCAAAAACGACATCGTATTCGCCAATCGCCCTCGCTTACTTTCAGGGAAGTACATCAATTACAACTACACCGCAGTGGGATTCGCCCCCTATGGCCAGCACTGGCGCAACATGCGCCGCATAGCCACGACTGAGCTACTCTCCAACTACCGCCTCAACACGTATCTCAACACTCGAGTGGAAGAACTAAAGTTTTGGGTAAAGAATTTGTACAAATTAATGGTTTGTAGTGGCGATTTTGTTGGGGTGGAAATGAAGTCGAAATTGAAGGAACTATCTTTCAACGTGGTGATGAGGATGATTAGTGGGAAACGGTATTTTGGTGTGGAAGTGGAGAATGTGGAGGAAGCCTTGGAGTTTAGGGAGATTATGAAGGAGCTTCTTGAATTGAGTGGGGCGACGAATGCAGCGGATTTTTTGCCCATTTTGAGAGTGTTTGATTTTCAAGGACTTGAAAAGAGGATGTTGAAAGCGAGTGGGCGAGCTGATGTTTTCCTACAAAAACTCATTGATGAACACAGGGAAAGGAGAGTTTCACGTTGGCCGGAGGACAAACATGGAAAAACCATGATTCAAACTCTGCTCTCCTTGCAAGAATCTCAACCCCATTATTACTCCGATGATATAATCAAGGGTCATGTTCTGACGATGTTGGCTGCGGGTACTGATACAACTTCAGGAACAATAGAATGGGCGATGTCGCTACTTTTGAATCATCCAACGCTGATGAAGAAAGCTTGGATTGAGATAAGAGAAAGGGTTGGGGAGAATCGGATGGTGGAGGAAGGCGATGTGAGTAACCTCAAATATGTGGAAGCCATAATCTACGAGACTCTTCGACTGTTTCCAGCAGCTCCACTGTTGGTCCCACATGAATGTTCTGAAGATTGTAGAATTGAAGGATTTGAGGTAGCCAAAGGAACAATGTTGTTGGTGAATGCATGGGCCATTCATAGGGACTCCAAAGTGTGGGAAGATCCCACCAGCTTCCAACCAGAGAGGTTTCTAAATTGGGAAGGCGTTGAATCCTACAAGTGGATACCTTTTGGAATGGGGAGGAGGGCTTGCCCAGGGGCTGCCCTTGCCCAACGAGTCGTGGGATTAACATTGGCCACTTTGATTCAGTGCTTTGAGTGGGACAAGGTTGATGAACAACAAATAGACTTGTCTGAAGGAAGTGGAATCACTATGCCTAAAGCCAAAGCTTTGGAGGCAATGTGTAAACCTCGTACCTCCATGCTTCATTTACTGGCTCATCTTTGA | 1599 | 46.53 | MEAIWICTSTSKFKITYPSMEPHTIPWLSRFLISFSLLFTLILLSKLRKVNHRKLPPTPPSLPVIGHLHLLKDPFHRVLHDLSKQYGPILSLSIGSRPVVVVSSPTAVRECFTKNDIVFANRPRLLSGKYINYNYTAVGFAPYGQHWRNMRRIATTELLSNYRLNTYLNTRVEELKFWVKNLYKLMVCSGDFVGVEMKSKLKELSFNVVMRMISGKRYFGVEVENVEEALEFREIMKELLELSGATNAADFLPILRVFDFQGLEKRMLKASGRADVFLQKLIDEHRERRVSRWPEDKHGKTMIQTLLSLQESQPHYYSDDIIKGHVLTMLAAGTDTTSGTIEWAMSLLLNHPTLMKKAWIEIRERVGENRMVEEGDVSNLKYVEAIIYETLRLFPAAPLLVPHECSEDCRIEGFEVAKGTMLLVNAWAIHRDSKVWEDPTSFQPERFLNWEGVESYKWIPFGMGRRACPGAALAQRVVGLTLATLIQCFEWDKVDEQQIDLSEGSGITMPKAKALEAMCKPRTSMLHLLAHL | 532 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 33876875 | 33879065 | - | CrPI670011_05g022210.1 | Cre05g2221 | 498734 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre05g2221 | 532 | FunFam | Cytochrome P450 family protein | 47 | 525 | - | - | |
| Cre05g2221 | 532 | PANTHER | CYTOCHROME P450 82C3-RELATED | 37 | 524 | IPR050651 | - | |
| Cre05g2221 | 532 | Gene3D | Cytochrome P450 | 42 | 527 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g2221 | 532 | Pfam | Cytochrome P450 | 56 | 513 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g2221 | 532 | PRINTS | P450 superfamily signature | 385 | 396 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g2221 | 532 | PRINTS | P450 superfamily signature | 332 | 349 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g2221 | 532 | PRINTS | P450 superfamily signature | 459 | 468 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g2221 | 532 | PRINTS | P450 superfamily signature | 468 | 479 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g2221 | 532 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 461 | 470 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cre05g2221 | 532 | PRINTS | E-class P450 group I signature | 321 | 338 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g2221 | 532 | PRINTS | E-class P450 group I signature | 384 | 402 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g2221 | 532 | PRINTS | E-class P450 group I signature | 107 | 128 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g2221 | 532 | PRINTS | E-class P450 group I signature | 83 | 102 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g2221 | 532 | PRINTS | E-class P450 group I signature | 425 | 449 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g2221 | 532 | PRINTS | E-class P450 group I signature | 204 | 222 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g2221 | 532 | PRINTS | E-class P450 group I signature | 468 | 491 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g2221 | 532 | PRINTS | E-class P450 group I signature | 458 | 468 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g2221 | 532 | PRINTS | E-class P450 group I signature | 341 | 367 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre05g2221 | 532 | CDD | CYP81 | 87 | 515 | - | - | |
| Cre05g2221 | 532 | SUPERFAMILY | Cytochrome P450 | 56 | 522 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre05g2221 | Cre-Chr5:33876875 | Cre06g0924 | Cre-Chr6:2653632 | 8.50E-149 | dispersed | |
| Cre05g2221 | Cre-Chr5:33876875 | Cre05g2224 | Cre-Chr5:33892594 | 4.40E-137 | proximal | |
| Cre04g1338 | Cre-Chr4:32214180 | Cre05g2221 | Cre-Chr5:33876875 | 3.00E-140 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre05g2221 | K13260 | - | csv:101207002 | 861.677 |