Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre05g2252 | ATGCCTACCGCCGTCTTCCGCGTCTCTTTTCTGTTCGTCTCTGTTTTTCAAATCATCTCCGCCGCAGGGTCGTCGCGCTGGACGGTGGAGTATCTGCCGGGATTTGCAGGCCGTCTCCCATTCGAACTGGAAACAGGATATGTGGGTGTTGGGGATTTGGAGGAAGTGCAATTGTTTTATTATTTTGTGAAATCGGAAGGAAATCCAAAGACGGATCCTCTGCTTTTTTGGCTCACCGGAGGCCCCGGTTGCTCTGCTTTAACTGCACTTGCCTTTGAAGTTGGTCCCATAAATTTTAAGATTGAGCGATACAATGGGAGCTTACCTAAAATAATCTTGAACCCTTATTCGTGGACGAAGAAATCCAGTATAATAATGGTAGATTTGCCAGTGGGAACAGGGTTTTCATATGGTAAAACTCCACAATCTCTTAAGACTGGAGATTTTAATCAAGTTCATCATTCTATTCAATTTTTTAAAAAGTGGTTAACTCATCATCCGGAATTTATATCTAATCCATTTTATGTGGGTGGAGATTCATACTCGGGTATTATCATTCCGGTTATTGCTCAAGAAATTTTGGAAGAAAATAAGTATGCTCCCTATGTAAATCTTCAGGGATACATATTGGGAAACCCAGTCACCATTCGTGACACGTATCAAAATTTTGCAATTTCTTTTGCTCATAGAATGACTCTTATCTCTGATGAGTTATTTGAGTCATTGACCTCTAGTTGCAAGGGAGAATATATAAATATTGATCCGAGCAATGTGGATTGTTTAAGACATTATAATACGTACCAAAAGTGTGTTTCAAAGATAGAAAAGTCAAGTATTTTGTTGCCAAAATGTTCGTTTCATTCTCCAAAGAAACAAAAAGATGCATTTGATCGAAGATCTCTTTACAATACCCCCAAAGTGCTTCTTGATCCCGAGCCAGCACTTCCTTCTCTTGATTGTCCTGGAAGCATTGGAGAATGGACAAGATGTAGGGATCGGCAAAATTACAACTTTGATGTTGAGAGTGCTTTTCCTTATCATGTGAACCTTAGTTCGAAAGGTTACAAGTCTTTGATTTATAGTGGGGATCATGATATGATTGTATCGCATTTGGACACTCAAGCATGGATTAAATCTTTAAATTATTCTATTGTTGAGGATTGGAGACCTTGGTTTATTGCAGATCAAGTAGCTGGATATACAAGAAGCTATGCAAATAAGATGACATTTGCCACTATAAAAGGTGGAGGGCACACAGCAGAATATACACAAAAAGAATGCAGTGCAGTATTTAGTAGATGGATAACTGGAGAACCCTTATAA | 1323 | 39.0 | MPTAVFRVSFLFVSVFQIISAAGSSRWTVEYLPGFAGRLPFELETGYVGVGDLEEVQLFYYFVKSEGNPKTDPLLFWLTGGPGCSALTALAFEVGPINFKIERYNGSLPKIILNPYSWTKKSSIIMVDLPVGTGFSYGKTPQSLKTGDFNQVHHSIQFFKKWLTHHPEFISNPFYVGGDSYSGIIIPVIAQEILEENKYAPYVNLQGYILGNPVTIRDTYQNFAISFAHRMTLISDELFESLTSSCKGEYINIDPSNVDCLRHYNTYQKCVSKIEKSSILLPKCSFHSPKKQKDAFDRRSLYNTPKVLLDPEPALPSLDCPGSIGEWTRCRDRQNYNFDVESAFPYHVNLSSKGYKSLIYSGDHDMIVSHLDTQAWIKSLNYSIVEDWRPWFIADQVAGYTRSYANKMTFATIKGGGHTAEYTQKECSAVFSRWITGEPL | 440 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 34097919 | 34101473 | - | CrPI670011_05g022520.1 | Cre05g2252 | 498765 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre05g2252 | 440 | PANTHER | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE | 28 | 434 | IPR001563 | GO:0004185(InterPro)|GO:0006508(InterPro)|GO:0016747(PANTHER)|GO:0019748(PANTHER) | |
Cre05g2252 | 440 | Gene3D | alpha/beta hydrolase | 24 | 295 | IPR029058 | - | |
Cre05g2252 | 440 | Gene3D | - | 314 | 440 | - | - | |
Cre05g2252 | 440 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 408 | 421 | IPR001563 | GO:0004185(InterPro)|GO:0006508(InterPro) | |
Cre05g2252 | 440 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 127 | 137 | IPR001563 | GO:0004185(InterPro)|GO:0006508(InterPro) | |
Cre05g2252 | 440 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 114 | 126 | IPR001563 | GO:0004185(InterPro)|GO:0006508(InterPro) | |
Cre05g2252 | 440 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 162 | 187 | IPR001563 | GO:0004185(InterPro)|GO:0006508(InterPro) | |
Cre05g2252 | 440 | Pfam | Serine carboxypeptidase | 33 | 437 | IPR001563 | GO:0004185(InterPro)|GO:0006508(InterPro) | |
Cre05g2252 | 440 | SUPERFAMILY | alpha/beta-Hydrolases | 29 | 439 | IPR029058 | - | |
Cre05g2252 | 440 | FunFam | Serine carboxypeptidase-like 19 | 22 | 290 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre05g2250 | Cre-Chr5:34081409 | Cre05g2252 | Cre-Chr5:34097919 | 9.30E-165 | dispersed | |
Cre05g2252 | Cre-Chr5:34097919 | Cre05g2830 | Cre-Chr5:38969982 | 3.50E-180 | dispersed | |
Cre05g2251 | Cre-Chr5:34088894 | Cre05g2252 | Cre-Chr5:34097919 | 1.70E-147 | tandem | |
Cre05g2252 | Cre-Chr5:34097919 | Cre05g2253 | Cre-Chr5:34108120 | 1.60E-28 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre05g2252 | K16296 | - | csv:101210918 | 548.125 |