Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre05g2265 | ATGCCCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTGCTCAAGGATCTATTTTGTTCCTTATCGTCTTTCTTGCGCGTTCTCTTTTGAAGCAGATTTTCCACCAGCCAAGAAAGAGAGATAAAGGAGTCATTAAGAAGATTGCAAACCCTAGAACGTGGAAGAAGAAGAAGAACTCTTTTACTCATCGTATTTTGTTTTCTATATCTGATTCAAGCCCTAGAATTCATTTGCTTCGCCGAGGATTGTGTTTCTGTTCTGGTCTGTGGGGTGGGTTTTTGGTTCGTGAAATTGGAATTGGAATTGGCCGCGGTGAACCTTTGCCGTGGGACAGGAAAGACCTCTTCAAGGAGAGGAAACACGAGAAGTCGGAGGCCATAGGGTCTGCGGCCAGATGGCGGGACTCTTATCATGGATCTCGCGAGTTCAATCGGTGGGGTTCTGCTGACTTTCGAAGACCTACTGGTCATGGTAAGCAGGGTAGTTGGCACCAGTTTTCTGAAGAATCTAGTCACGGTTATGGGCCTTCTCGGTCATTCAGTGACAGGGTGTTAGAAGATGAGAGCTTCCGGCCGTCAGTTCCTCGTGGAGATGGAAGATATATTAGAATCGGTAGAGAAATTAGAGGTTCTTTTAGTCATAGAGACTGGAGAAGTCACTCCAGGGAGACCAACAATGGATTTGGGAACCCATCGCGAAGGCCATCATCGGCATCGCAGGATGTGAATTCTGATCAGAGGTCAGTAGATGATACGGTGACATATTCCTCTCCTCAATCTGTTCATGGGTTAGAAAATGGCCCGAGGTCCGATGTGGAAGTTTCCCTTGGCTCCACTGATTGGAAGCCACTTAAGTGGTCCCGATCTGGGAGTTTGTCTTCCCGGGGATCTGCTTACAGCAGTTCGACGAACTCGAAGAATGAAAAGGCTGATTTACCTCTTAGAGTTGCATCTCCTATAGAAAGCCCTTCTGCTGAAACTACTGCCTGTGTGACATCTTCTCTGCCTTCTGAAGATGCAATTTCTAGGAAGAAGCCAAGGCTTGGATGGGGTGATGGATTAGCCAAATACGAGAAAGAAAAAGTTGAGGTTCCTGATGGAAGCCTGAGAAAAGAAGTGGCTCTTCTTTCAAGCGGCAGTGCTGAATTAACTCATTCCCTTGGTTCAAACTTTGCTGAGAAAAGTCCCAAAACTTTGCCCTTTTCAGATTGTGCATCTCCTGCAACTCCATCCTCTTTTGCCTGTAGTTCATCATCAGAGTCTGAAATTGATTCTCTTGAAAATGAACTTAAATCTTTGAAATCTGGAAATGGAGGCAATGTTTCTCATAAAAAATCTTGCAGTGTCACACATTTGGTGGAGAATGTGACATATTTCAAAGAACAAGATGGTGTCTCTTGTGTTGCCCCTCGTCCTGCTCCCTTGGTGATAGTTTCGTCTTCTGATGCAACAGTTGAGAAGATGCCAGTCTGCAAGGGTGACATGGGAGTTGAAGATGTTGATACAAAGGCTGATGAAATTGACAGTCCTGGAACTGTGACATCAAAATTTAACGAACCATCCCGAGTGGTAAAGACTGTTGCTTCTGATCTTGTGGTACATGGTCATTGCTCTGAAGTTACAGATGTAATTGTCCCTGACAAGATGGAACGGAATTTTCCCGTATCTGGGTCTTTTGTGGACGAGCATAAAACAATTGGCTCTGACAATGAATGCATTCTTGCTAAGAGTTGTACCAAGGAATCTATTTATGGTGGTTTGATGGCCCAAGCTGGCAGTAGATCATCTCTTTGTGATCAAATTTTTGCGTGTAATAAAGAATATGCAAGTAGAGCTGCAGAAGTAATTTTTAAGAAATTACCAGCAGAAATGTGCAAGATCAGCAGTAAAAGCACCAAAATTGTGTCCTGCTCAGAGACTGAGAAATTTGTTAAAGAGAAATTTCTAATGAGGAGGCAGTTCTTAAAATTTAAGGAGAGTGCATTAACCTTCAGATTTAAAGCCTTGCAACAATCGTGGAAAGAAGGTTTGCTGCATTCTGTGAAGAAATGTCGCTCAAGGCCACAAAAAAAGGAGTTGAGTCTAAGGGTGTCACATTCTGGCCATCAGAAGTACAGGTCTTCAACTCGCTCCCGTTTGGTTCAGCAAGGAGCATGTCAGAACCCTACCCTTAACACAGAAATTGCTGTTCGTTACTCCAGTAAGCTGCTGTTGAACCCTCAAATTAAGCTTTACAGGAATAGTTTAAAGATGCCAGCTATGATTTTGGACAAGAAGGAAAAGATGGCATTAAGGTTCATCTCTCATAATGGGTTGGTCGAAGATCCCTGTGCTGTTGAGAAGGAAAGGAACATGATAAACCCTTGGACTTCAGCCGAGAGAGAGATATTCTGGGAGAAACTATCCTTGTTTGGAAAGGATTTTAAGAAAATTTCTTCATTTCTCGACCTCAAAACCACAGCTGACTGTATCCAGTTCTATTACAAGAACCACAAATCTGATAGTTTTAAGAAGAATAAAAATTTGGAGTTGGGCAAGCAAGTGAAATCTTCTGCCATCACATACTTGGTAACATCAGGGAAAAAATGGAATCCAGACGTGAATGCTACTTCCCTCGATATCTTAGGTGTTGCTTCAGTAATGGCAGCACAAGCAGACTACGACATTGGAAACCAGCAAAAATGTACTCGCCATTTGGGTATGGGAAGGGATGTTGAGTCAAAAGTATCATGTAGTGCTAGCACTCCTTCAAATAAAAACAATTTGGATGCTCTTCAGACTGAAAAAGAAACGGTTGCTGCTGATGTGCTTGCTGGTATATGTGGTTCAATATCTTCGGAGGCCCTGAGTTCTTGCATTACAAGTGCTATTGATCCCAGTGAGGACCACCGGGAGCGGAAGTGTTATAAAGTGGATTCTGCAGTGAAATTGCCTTCGTTGTCTGACGTCATGCAGAAAACTGATAATGAGGAACCTTGTTCAGATGATAGTTCTGAGGATGTAGATTCTTCAAATTGGACAGATGAGGAGAAGTCGATATTCATGCAGGCTGTGTCGTCCTATGGTAAGGATTTTGATATGATCTCTAGATGTATCAGGTCAAAGTCTAGGGACCAGTGCAAGGTTTTCTTCAGCAAAGCTCGGAAATGCCTTGGACTGGATTTGATGCATACTTCTGGAGATGTAGGCGAAACACCTGGGAGTGGTAATGACGCCAGTGGGAGTGGGACTGACACAGAAGATCACTGTATTGTGGAAATCTGTGGAGCCCATGGCAGTGATGAATTTGTCTCCAAGTCAATCAACGGTGTATCAACATCTGTTGACATAAATCATGAAGAATCTGTTTCTGCTGTGACTGTCAACATGCGGACCAGTAGTGAATTTGAGGAAAGTACAGTATTGCAACAGTCGGATGAGAAATGTGCTGAGGCTGTTGGAAACTTGATTTCTGAGATATCGAAGGAAGAGGATTTGCCTAGTCCAGATTCTCATTCTGCCTACAATCTCACAAATGCAGCTGCTTCTCTGAGCCAGCCCGTGCATGACCACAAAATTGAAGGCTCTTCTGAAAATACCGAAGGTGGAAACAAGTGCTGTAATGAACCTGACATTCTGAGATCTGAATCGGTGTCCACTGTTGATGAAAATTCAGCTGCTGTGAGCGAGAGCAGAGCTACAGCGAAGCTTGCATTTGGAGGAGAAGAAGAAGGAAGGAACACTAATTTACATGTTCAGAGTATATTGCAGTGCTCAGTTCAGAATTCAACTGGGTTTGATTCCAATCTTGCTTTAGAGGGCAGCTCCTTAGGACTTGATCCACAAATCTTGCATCCAACCGTTCTTAAAGTGGAACATGTAGAGAAGTCTTGTGTCGAGTCTGAGAACTCTCTTGCTGTCGGGAATTCTGATCCTGGTGTCATTGGAAGGGAACAGATGCTTAACCAAGATATGTTGTCATCAACAGCTGTCTTGCAGGAGGTTAGTGATGCGCATCAAAAGCCTATGAATAGAGATGACTATGCTGAGCATCAAAATAATTTGTCGCACGATAGTGAATCCAAGTTTCCAAGAAGCTATCCTTTCAACAAACAAATCTTTGAGGACATCAATAGAAATATCAATCGCACATATTTTCCTGTTGTTCAAGGGCTGTCAAAGCCAGACATCAATTGTAACAGTTCATATGTTTCTGAGGGCCACTATCTTCAGAATTGTAACAGTTCCAAGCCGCACAACCCGGCTGAGCTTCCTTTTTTGCCTCAGAATATAGACTTGGGTCATGATCGTCAGAAGAAAGCTTCATGCAGTGGCAGTGCTTCAGATTCTGATGTTCCACGCAGGAAAGGTGATGTGAAACTGTTTGGTCAGATACTAAGTCATGCCCCTTCCGAGCAAAATTCGAGTTCTGGTTCGAACGAGGGTGGAGAGGAGAAGGGACTTCACAAATCCAGCAGCAAATCATGCGACATTGGAGAAAATGTTCCGTTAAGGAGTTACGGTTTTTGGGATGGAAGCAGAATACAGACGGGTTTGTCTGCTTTGCCGGATTCTGCCATTTTACAAGCCAAGTATCCTGCTGCATTCAGTGGCTACTCTGCTACGTCTGTTAAAACTGAACAGCAGCCATTGCAGGCACTCACAAATAATGGTGACCGAAGTCTTAATGGACTAGTGTCCGCTTTTCCAACCAAGGATGGAGTGGTAGATTATCATTCGTATAGGAGTCGAGACGGAGTTAAGATGCGACCTTTCCCAGTTGATATATTTTCTGAGATGCAAAGAAGAAATGGCTTCGATGCTGTGTCCTTGTCAAGTTTACAGCAGCAGGGAAGGGTGCTAGTTGGAATGAATGTTGTTGGAAGGGGAGGGATTCTCATGGGTGGTTCTTGTACTGGTGTTTCAGATCCTGTAGCAGCCATTAAAATGCACTATGCCAAGGCCGAGCAATACATTGCGCAACCTGGTAGTACATTCACCAGAGAAGATGGTAGTTGGAGAGGAGGTAATGGTGGAGATTTAGGCAGCAGAAATAATCTTCTGAAAATGGGAGCGGGCATAGTGTTACACCTCAGCTCCTCTTACAGGCATCAAGAAAAGAGTTGTAAATGTAACGACCAACGAGATGAAAACCAACCAATGGCTTATAGTTATGAGGTCGTGTCAACGGCGGAGCAAAAAGTTCCAATGCGCCTATCTGTATCAACATCATCGGCCTTCTTAAGATCCAGCAGTTATATTTGCTTTCTGAAACCAGACAAATCTAAGAAAAAATGGTTTCAAAAGGAGGAGAGTGTGGATGTGATTTCCTTTTTGGAACAATCTCCATTGGACGTTCCTGCACAACCTCCAATAGAAGATGATGTCAAACAAACCGAACCGGAGAATGAACCAAGCGAGCTTGCGCATTTGGAGGCTGCGGAGTCGGCTGTTGCTGAAGCTCAGCTGGCTGTGGTGGTTGAATATCCACCTAGTCCTATCTCCTGTCGGCCAGAAATGTCGGAGGAAACAGCAGCTATTGTGATTCAAACTGCATTTCGTGGATATACGGCAAGGAGAGCATTGAGAGCTCTCAAAGCGTTGATGAGATTGAAGACATTGGTACAAGGGCAATCTGTCAAACGGCAAGTGGCCTCTACTTTAAAATGCATGCAAACCCTTACTCATTTACAGTCAGAGATTCGTGCAAGAAGAATAAGAATGTCGGAAGAAAATCAGGCTCTTCAGCGACAACTTCGTAACAAACGTGAGAAAGATCTCGAGAAGTTAAAATTTGCTATGGATGATGACTGGAATCATAGCACCCAATCTAAAGCACAAATTGAAGCTAAACTATTGAACAAGCATGACGCTGCAATAAGAAGAGAAAGGGCTCTGGCTTATGCTTACTCTCATCAGCAAACATGGAAGAACTCTTCAAAAACTGCAACCCCCACTGTCATGGATCCAAACAATCCCCACTGGGGTTGGAGTTGGTTGGAGAGGTGGATGGCAGCTCGTCCATGGGAATCTCAAAGCACCACTGATCAGCCGGATCACATTTCTGTCACGAGTGTTGCAACTCGTGCATCTGTGGTCGACATTCTCCAAATTTATGCTCGGCGTGATCAGAACCCTTCTACCAAGCTTTCTCCAAAGGCTCCTACAAGCCAAAAGTCAAGCCAATTGCCTAAGTATCATTCGCCTTCAACTCCCAAGGCACTATTTTCATCATCTGGCAGAAAGAAAACAAATGCAGCCAACTCAAGGATAGGCAGCTGGGGCAGAGATGAAGACATAAGGAGCATCACTAGTGTCAAATCAAAGCTCTCCCGGAGGCATACTATTGCAGGATCATCATTCAGGGATGATGAAAGCCTTGCCAGTTTACCTTCAGTTTCAAGTTACACGACGCCATCGAAGGCTGTGAAGAATCGGTCCCGGTTGGCAAGTTCATCTAGAACAGAGAAGAAAGGAACAATGGAAAAAGGATCTGCAAGTGCAGGTTCTGCAAAAAAACAACTTTCCTTTTCAGCTTTTCCTGTTAAGCCAAGGAGGCAATCTAGTCCTCCAATTGCTACACCATTCCTTGCTGGCCTTGCGGTAGCTGCTGCAGCTCTAGCTGGTAGATATGGAATTCGAGCTTGGCAAGCATTCAAGACACGGCCACCACAAGCCAGATCACGTAAATTCTATGAAGGTGGTTTCTATCCTACGATGACAAGGAGGGAAGCAGCTCTTATTCTTGGTATTAGAGAGAATGCAACTCCAGATAAGATTAAGGAAGCACATAGAAGGGTCATGATCGCGAACCATCCCGATGCTGGTGGCAGTCATTATCTTGCTTCTAAGATCAATGAAGCCAAGGATGTGCTACTCGGAAAATCGAAAAGCAGTGGATCAGCATTTTAA | 6894 | 44.05 | MPISLSLSLSLSLFAQGSILFLIVFLARSLLKQIFHQPRKRDKGVIKKIANPRTWKKKKNSFTHRILFSISDSSPRIHLLRRGLCFCSGLWGGFLVREIGIGIGRGEPLPWDRKDLFKERKHEKSEAIGSAARWRDSYHGSREFNRWGSADFRRPTGHGKQGSWHQFSEESSHGYGPSRSFSDRVLEDESFRPSVPRGDGRYIRIGREIRGSFSHRDWRSHSRETNNGFGNPSRRPSSASQDVNSDQRSVDDTVTYSSPQSVHGLENGPRSDVEVSLGSTDWKPLKWSRSGSLSSRGSAYSSSTNSKNEKADLPLRVASPIESPSAETTACVTSSLPSEDAISRKKPRLGWGDGLAKYEKEKVEVPDGSLRKEVALLSSGSAELTHSLGSNFAEKSPKTLPFSDCASPATPSSFACSSSSESEIDSLENELKSLKSGNGGNVSHKKSCSVTHLVENVTYFKEQDGVSCVAPRPAPLVIVSSSDATVEKMPVCKGDMGVEDVDTKADEIDSPGTVTSKFNEPSRVVKTVASDLVVHGHCSEVTDVIVPDKMERNFPVSGSFVDEHKTIGSDNECILAKSCTKESIYGGLMAQAGSRSSLCDQIFACNKEYASRAAEVIFKKLPAEMCKISSKSTKIVSCSETEKFVKEKFLMRRQFLKFKESALTFRFKALQQSWKEGLLHSVKKCRSRPQKKELSLRVSHSGHQKYRSSTRSRLVQQGACQNPTLNTEIAVRYSSKLLLNPQIKLYRNSLKMPAMILDKKEKMALRFISHNGLVEDPCAVEKERNMINPWTSAEREIFWEKLSLFGKDFKKISSFLDLKTTADCIQFYYKNHKSDSFKKNKNLELGKQVKSSAITYLVTSGKKWNPDVNATSLDILGVASVMAAQADYDIGNQQKCTRHLGMGRDVESKVSCSASTPSNKNNLDALQTEKETVAADVLAGICGSISSEALSSCITSAIDPSEDHRERKCYKVDSAVKLPSLSDVMQKTDNEEPCSDDSSEDVDSSNWTDEEKSIFMQAVSSYGKDFDMISRCIRSKSRDQCKVFFSKARKCLGLDLMHTSGDVGETPGSGNDASGSGTDTEDHCIVEICGAHGSDEFVSKSINGVSTSVDINHEESVSAVTVNMRTSSEFEESTVLQQSDEKCAEAVGNLISEISKEEDLPSPDSHSAYNLTNAAASLSQPVHDHKIEGSSENTEGGNKCCNEPDILRSESVSTVDENSAAVSESRATAKLAFGGEEEGRNTNLHVQSILQCSVQNSTGFDSNLALEGSSLGLDPQILHPTVLKVEHVEKSCVESENSLAVGNSDPGVIGREQMLNQDMLSSTAVLQEVSDAHQKPMNRDDYAEHQNNLSHDSESKFPRSYPFNKQIFEDINRNINRTYFPVVQGLSKPDINCNSSYVSEGHYLQNCNSSKPHNPAELPFLPQNIDLGHDRQKKASCSGSASDSDVPRRKGDVKLFGQILSHAPSEQNSSSGSNEGGEEKGLHKSSSKSCDIGENVPLRSYGFWDGSRIQTGLSALPDSAILQAKYPAAFSGYSATSVKTEQQPLQALTNNGDRSLNGLVSAFPTKDGVVDYHSYRSRDGVKMRPFPVDIFSEMQRRNGFDAVSLSSLQQQGRVLVGMNVVGRGGILMGGSCTGVSDPVAAIKMHYAKAEQYIAQPGSTFTREDGSWRGGNGGDLGSRNNLLKMGAGIVLHLSSSYRHQEKSCKCNDQRDENQPMAYSYEVVSTAEQKVPMRLSVSTSSAFLRSSSYICFLKPDKSKKKWFQKEESVDVISFLEQSPLDVPAQPPIEDDVKQTEPENEPSELAHLEAAESAVAEAQLAVVVEYPPSPISCRPEMSEETAAIVIQTAFRGYTARRALRALKALMRLKTLVQGQSVKRQVASTLKCMQTLTHLQSEIRARRIRMSEENQALQRQLRNKREKDLEKLKFAMDDDWNHSTQSKAQIEAKLLNKHDAAIRRERALAYAYSHQQTWKNSSKTATPTVMDPNNPHWGWSWLERWMAARPWESQSTTDQPDHISVTSVATRASVVDILQIYARRDQNPSTKLSPKAPTSQKSSQLPKYHSPSTPKALFSSSGRKKTNAANSRIGSWGRDEDIRSITSVKSKLSRRHTIAGSSFRDDESLASLPSVSSYTTPSKAVKNRSRLASSSRTEKKGTMEKGSASAGSAKKQLSFSAFPVKPRRQSSPPIATPFLAGLAVAAAALAGRYGIRAWQAFKTRPPQARSRKFYEGGFYPTMTRREAALILGIRENATPDKIKEAHRRVMIANHPDAGGSHYLASKINEAKDVLLGKSKSSGSAF | 2297 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 34209890 | 34227384 | - | CrPI670011_05g022650.1 | Cre05g2265 | 498778 |
Annotation
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre05g2265 | 2297 | MobiDBLite | consensus disorder prediction | 161 | 178 | - | - | |
| Cre05g2265 | 2297 | MobiDBLite | consensus disorder prediction | 1461 | 1476 | - | - | |
| Cre05g2265 | 2297 | SUPERFAMILY | Homeodomain-like | 1001 | 1053 | IPR009057 | - | |
| Cre05g2265 | 2297 | CDD | SANT | 1006 | 1045 | IPR001005 | - | |
| Cre05g2265 | 2297 | Coils | Coil | 417 | 437 | - | - | |
| Cre05g2265 | 2297 | SMART | sant | 786 | 834 | IPR001005 | - | |
| Cre05g2265 | 2297 | SMART | sant | 1003 | 1051 | IPR001005 | - | |
| Cre05g2265 | 2297 | ProSiteProfiles | IQ motif profile. | 1836 | 1864 | - | - | |
| Cre05g2265 | 2297 | FunFam | Import inner membrane translocase subunit tim14 | 2224 | 2290 | - | - | |
| Cre05g2265 | 2297 | MobiDBLite | consensus disorder prediction | 216 | 312 | - | - | |
| Cre05g2265 | 2297 | MobiDBLite | consensus disorder prediction | 2122 | 2166 | - | - | |
| Cre05g2265 | 2297 | MobiDBLite | consensus disorder prediction | 2037 | 2086 | - | - | |
| Cre05g2265 | 2297 | MobiDBLite | consensus disorder prediction | 283 | 310 | - | - | |
| Cre05g2265 | 2297 | Pfam | IQ calmodulin-binding motif | 1839 | 1857 | IPR000048 | GO:0005515(InterPro) | |
| Cre05g2265 | 2297 | SUPERFAMILY | Homeodomain-like | 773 | 835 | IPR009057 | - | |
| Cre05g2265 | 2297 | MobiDBLite | consensus disorder prediction | 2037 | 2085 | - | - | |
| Cre05g2265 | 2297 | MobiDBLite | consensus disorder prediction | 981 | 1006 | - | - | |
| Cre05g2265 | 2297 | ProSiteProfiles | SANT domain profile. | 785 | 836 | IPR017884 | - | |
| Cre05g2265 | 2297 | Pfam | Myb-like DNA-binding domain | 1006 | 1047 | IPR001005 | - | |
| Cre05g2265 | 2297 | Pfam | Myb-like DNA-binding domain | 789 | 831 | IPR001005 | - | |
| Cre05g2265 | 2297 | Gene3D | - | 951 | 1060 | - | - | |
| Cre05g2265 | 2297 | ProSiteProfiles | Myb-like domain profile. | 999 | 1049 | IPR001005 | - | |
| Cre05g2265 | 2297 | MobiDBLite | consensus disorder prediction | 224 | 265 | - | - | |
| Cre05g2265 | 2297 | MobiDBLite | consensus disorder prediction | 1461 | 1489 | - | - | |
| Cre05g2265 | 2297 | Gene3D | DnaJ domain | 2224 | 2291 | IPR036869 | - | |
| Cre05g2265 | 2297 | CDD | DnaJ | 2242 | 2286 | IPR001623 | - | |
| Cre05g2265 | 2297 | Gene3D | - | 766 | 838 | - | - | |
| Cre05g2265 | 2297 | PANTHER | DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN | 107 | 420 | - | - | |
| Cre05g2265 | 2297 | MobiDBLite | consensus disorder prediction | 2122 | 2143 | - | - | |
| Cre05g2265 | 2297 | SMART | dnaj_3 | 2237 | 2291 | IPR001623 | - | |
| Cre05g2265 | 2297 | SUPERFAMILY | Chaperone J-domain | 2228 | 2289 | IPR036869 | - | |
| Cre05g2265 | 2297 | Coils | Coil | 1899 | 1919 | - | - | |
| Cre05g2265 | 2297 | ProSiteProfiles | SANT domain profile. | 1002 | 1053 | IPR017884 | - | |
| Cre05g2265 | 2297 | MobiDBLite | consensus disorder prediction | 149 | 179 | - | - | |
| Cre05g2265 | 2297 | ProSiteProfiles | dnaJ domain profile. | 2238 | 2291 | IPR001623 | - |
Pathway
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre05g2265 | - | - | - | - | 0.0 |
Dupl-types
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre04g0976 | Cre-Chr4:28377469 | Cre05g2265 | Cre-Chr5:34209890 | 9.20E-73 | dispersed | |
| Cre05g1963 | Cre-Chr5:31752736 | Cre05g2265 | Cre-Chr5:34209890 | 5.90E-26 | dispersed | |
| Cre05g2265 | Cre-Chr5:34209890 | Cre06g0885 | Cre-Chr6:2148734 | 1.30E-20 | dispersed | |
| Cre01g0415 | Cre-Chr1:3524471 | Cre05g2265 | Cre-Chr5:34209890 | 1.70E-209 | transposed | |
| Cre04g0974 | Cre-Chr4:28366146 | Cre05g2265 | Cre-Chr5:34209890 | 4.10E-45 | transposed | |
| Cre07g1360 | Cre-Chr7:28500905 | Cre05g2265 | Cre-Chr5:34209890 | 2.20E-24 | transposed | |
| Cre10g2162 | Cre-Chr10:36146258 | Cre05g2265 | Cre-Chr5:34209890 | 7.40E-50 | wgd |
Deco-Alignment
| Select | Vvi1 | Blo1 | Blo2 | Bda1 | Bda2 | Bpe1 | Bpe2 | Bma1 | Bma2 | Cmo1 | Cmo2 | Cma1 | Cma2 | Car1 | Car2 | Sed1 | Cpe1 | Cpe2 | Bhi1 | Tan1 | Cmetu1 | Lac1 | Hepe1 | Mch1 | Lcy1 | Cla1 | Cam1 | Cec1 | Cco1 | Clacu1 | Cmu1 | Cre1 | Cone1 | Cone2 | Cone3 | Cone4 | Lsi1 | Csa1 | Chy1 | Cme1 | Blo3 | Blo4 | Bda3 | Bda4 | Bpe3 | Bpe4 | Bma3 | Bma4 | Sed2 | Cmo3 | Cmo4 | Cma3 | Cma4 | Car3 | Car4 | Cpe3 | Cpe4 | Bhi2 | Tan2 | Cmetu2 | Lac2 | Hepe2 | Mch2 | Lcy2 | Cla2 | Cam2 | Cec2 | Cco2 | Clacu2 | Cmu2 | Cre2 | Lsi2 | Csa2 | Chy2 | Cme2 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Vvi13g474 | . | Blo13g00915 | . | Bda15g00176 | . | . | . | Bma08g01144 | . | Cmo04g01429 | Cma04g01355 | Cma18g00883 | Car04g01432 | Car18g00808 | . | Cpe13g00819 | Cpe09g00427 | . | . | . | . | . | . | . | Cla05g02129 | Cam05g2284 | Cec05g2305 | . | . | . | Cre05g2265 | . | Cone5ag0328 | . | Cone18ag0502 | Lsi02g01698 | . | Chy10g01339 | Cme10g00057 | Blo13g00730 | . | . | . | Bpe04g01873 | . | . | Bma08g00947 | . | Cmo04g02721 | Cmo15g00445 | Cma04g02600 | Cma15g00434 | Car04g02506 | Car15g00406 | Cpe01g01224 | Cpe01g02257 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | Lsi04g00055 | Csa05g01776 | . | . |
Syn-Families
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Cre01g0429 | . | 1 | 479 | IQD Protein Family | AT3G52290 | 54.2 | 2.6e-103 | 372.9 | |
| Cre05g2265 | . | 1802 | 2011 | IQD Protein Family | AT2G26410 | 50.7 | 4.8e-43 | 172.9 | |
| Cre03g1557 | . | 36 | 443 | IQD Protein Family | AT3G22190 | 57.8 | 7.9e-97 | 351.3 | |
| Cre05g1963 | . | 1 | 438 | IQD Protein Family | AT2G26180 | 61.6 | 3.8e-120 | 428.7 | |
| Cre04g1962 | . | 25 | 298 | IQD Protein Family | AT2G33990 | 52.1 | 6.1e-63 | 238.0 | |
| Cre07g1360 | . | 89 | 267 | IQD Protein Family | AT2G33990 | 53.3 | 4.0e-46 | 182.2 | |
| Cre04g1962 | . | 25 | 246 | IQD Protein Family | AT3G15050 | 50.5 | 4.6e-55 | 211.8 | |
| Cre07g1360 | . | 88 | 279 | IQD Protein Family | AT3G15050 | 58.2 | 2.5e-53 | 206.1 | |
| Cre09g1774 | . | 111 | 463 | IQD Protein Family | AT5G13460 | 50.1 | 2.6e-74 | 276.6 | |
| Cre06g1039 | . | 29 | 537 | IQD Protein Family | AT4G00820 | 51.3 | 4.0e-114 | 409.1 | |
| Cre03g1876 | . | 1 | 391 | IQD Protein Family | AT3G16490 | 50.5 | 2.5e-65 | 246.5 |
Syn-Orthogroups
| Select | Orthogroup | Bda | Bhi | Blo | Bma | Bpe | Cam | Car | Cco | Cec | Chy | Cla | Clacu | Cma | Cme | Cmetu | Cmo | Cmu | Cone | Cpe | Cre | Csa | HCH | Hepe | Lac | Lcy | Lsi | Mch | Sed | Tan | Vvi | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OG0007579 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 2 | 1 | 2 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 0 | 36 |
Regulatory proteins
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 53758 | PF00249 | Myb_DNA-binding | 3.10E-06 | CL0123 | Cre | TF |